Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20225
(701 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase / F... 77 9e-15
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 77 2e-14
At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identi... 68 7e-12
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno... 66 3e-11
At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) / ... 65 5e-11
At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type pept... 57 1e-08
At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) / ... 57 1e-08
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid... 53 2e-07
At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-proly... 51 9e-07
At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type pept... 49 3e-06
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 47 1e-05
At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type pept... 46 2e-05
At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type pept... 36 0.020
At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type pept... 34 0.10
At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase, pu... 33 0.18
At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase, pu... 33 0.18
At1g20810.1 68414.m02606 immunophilin / FKBP-type peptidyl-proly... 31 0.74
>At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase /
FK506-binding protein (ROF1) identical to rotamase FKBP
(ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen.
Genet. 252 (5), 510-517 (1996))
Length = 551
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 236
G+ + + G+ P++G V VHYTGTL +G KFDSSRDR PFKF +G+ +VI+GWD
Sbjct: 39 GLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWD 98
Query: 237 EGVAKM 254
G+ M
Sbjct: 99 IGIKTM 104
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 400
GE A T + AYG+ G P IP N+TL FDVELL+ + ++ + K+
Sbjct: 107 GENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKWDSVKDICKD 153
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELLRLE*IQFVT 394
GE+ LT P Y +G++G P G +PPN+TL ++EL+ + + VT
Sbjct: 219 GEKVLLTVKPQYGFGEKGKPASAGEGAVPPNATLEINLELVSWKTVSEVT 268
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQ---QGHPGVIPPNSTLIFDVELLRLE 376
GE A +T P+YA+G Q V+PPNST+ ++V+LL +
Sbjct: 342 GEVALVTIDPEYAFGSNESQQELAVVPPNSTVTYEVDLLTFD 383
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 102 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
P++G V VHYTGTL +G KFDSSRDRG PFKF +G+ VI+GWD G+ M
Sbjct: 62 PENGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKGWDLGIKTM 112
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
GE A T P+ AYG+ G P IPPN+TL FDVEL+
Sbjct: 115 GENAIFTIPPELAYGETGSPPTIPPNATLQFDVELI 150
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHP---GVIPPNSTLIFDVELL 367
GE A +T SP+YA+G VIPPNST+ ++VEL+
Sbjct: 352 GEVALITISPEYAFGSSESKQELAVIPPNSTVYYEVELV 390
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHP------GVIPPNSTLIFDVELLRLE*IQFVT 394
GE+ LT P Y +G+ G P IPPN+TL D+EL+ + + VT
Sbjct: 227 GEKVLLTVKPQYGFGEFGRPASDGLQAAIPPNATLQIDLELVSWKTVVEVT 277
>At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identical
to Probable FKBP-type peptidyl-prolyl cis-trans
isomerase 3, chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744)
[Arabidopsis thaliana]; contains Pfam PF00254:
peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 208
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 111 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGV 245
GQ + HY G L NGK FDSS +RGKP FRIG EVI+GWD+G+
Sbjct: 109 GQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGI 153
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGH-----PGVIPPNSTLIFDVELL 367
G + L P+ AYG +G +IPP S L+FD+E +
Sbjct: 165 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205
>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
immunophilin identical to immunophilin (GI:2104957)
[Arabidopsis thaliana]
Length = 112
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +3
Query: 54 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNG---KKFDSSRDRG-KPFKFRIGKSEV 221
MGV + I PG+ P GQTV VH TG +G +KF S++D G KPF F+IGK V
Sbjct: 1 MGVEKQVIRPGN-GPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAV 59
Query: 222 IRGWDEGVAKM 254
I+GWDEGV M
Sbjct: 60 IKGWDEGVIGM 70
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPG-VIPPNSTLIFDVELLRLE 376
+GE A+L CS DYAYG G P I PNS L F++E+L ++
Sbjct: 72 IGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLSVQ 112
>At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38936| FK506-binding protein
2-2 precursor (EC 5.2.1.8);
Length = 163
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +3
Query: 111 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGV 245
G T+ VHY G LT+G FDSS +RG PF+F++G +VI+GWD+G+
Sbjct: 52 GDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGL 96
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
VGE+ KL YG+QG P IP +TLIFD EL+
Sbjct: 101 VGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELI 137
>At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative POSSIBLE
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8)
(PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP
BINDING IMMUNOPHILIN), rabbit,
SWISSPROT:P27124:FKB4_RABBIT
Length = 190
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
VGE AK+TC P+YAYG+ G P IPP++TLIF+VEL+
Sbjct: 82 VGEVAKITCKPEYAYGRAGSPPDIPPDATLIFEVELV 118
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 ETISPGDESTYPKSGQTVVVHYTGTLTNGKK-FDSSRDRGKPFKFRIGKSEVIRGWDEGV 245
+ ISP D+ V VHY G L +K FD++R+ F F +G VIR WD +
Sbjct: 24 DAISPSDDLP------VVDVHYEGILAEDEKVFDTTREDNLVFSFELGTGSVIRSWDIAL 77
Query: 246 AKM 254
M
Sbjct: 78 KTM 80
>At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38935 FK506-binding protein
2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans
isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1)
{Arabidopsis thaliana}, immunophilin (FKBP15-1)
GB:U52046 [Arabidopsis thaliana] (Proc. Natl. Acad. Sci.
U.S.A. 93 (14), 6964-6969 (1996))
Length = 153
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 111 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGV 245
G + VHY G LT+G FDSS +RG P +F +G +VI GWD+G+
Sbjct: 52 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGL 96
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
VGE+ KL YG G P IP +TLIFD EL+
Sbjct: 101 VGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELV 137
>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
peptidyl-prolyl cis-trans isomerase-related immunophilin
FKBP46 - Spodoptera frugiperda (fall
armyworm),PIR2:A55320
Length = 477
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 GVTVETISPGDES-TYPKSGQTVVVHYTGTLT-NGKKFDSSRDRGKPFKFRIGKSEVIRG 230
G+ VE +S G + G+TV V Y G L NGK FDS+ + PFKFR+G VI+G
Sbjct: 370 GLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGKS-PFKFRLGIGSVIKG 428
Query: 231 WDEGVAKM 254
WD GV M
Sbjct: 429 WDVGVNGM 436
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
VG++ KLT P YG +G G IPPNS L FDVEL+ ++
Sbjct: 438 VGDKRKLTIPPSMGYGVKGAGGQIPPNSWLTFDVELINVQ 477
>At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 2,
chloroplast precursor (Ppiase) (Rotamase)
(SP:O22870)[Arabidopsis thaliana]; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 223
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +3
Query: 102 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
P G V +Y + +G+ FDSS ++G P+ FR+G +VI+G DEG+ M
Sbjct: 121 PPVGFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSM 171
>At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative similar to
FK506 binding protein 1 (GP:21535744) [Arabidopsis
thaliana]
Length = 217
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/54 (46%), Positives = 33/54 (61%)
Frame = +3
Query: 84 GDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGV 245
GDE+ P+ G V +HYT +G FDSS R +P RIG +VIRG D+G+
Sbjct: 106 GDEA--PR-GVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVIRGLDQGI 156
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
+ +PK GQ V HY G +G++ DS+ +G P + R+G + ++ G++ G+ M
Sbjct: 131 QGDFPKDGQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFEMGIRDM 185
>At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
similarity to peptidyl-prolyl cis-trans isomerase
Length = 143
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +3
Query: 57 GVTVETISPGDES-TYPKSGQTVVVHYTGTLT-NGKKFDSSRDRGKPFKFRIGKSEVIRG 230
G+ VE + G+ + + G+ V VHYTG L NGK FDS+ + + +KFR+ +VI+G
Sbjct: 37 GLIVEELCMGNPNGKKAEPGKRVSVHYTGKLQGNGKIFDSTVGKSR-YKFRLDAGKVIKG 95
Query: 231 WDEGVAKML 257
D G+ ML
Sbjct: 96 LDVGLNGML 104
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
VG + KLT P+ YG +G G IPP+S L+FDVELL ++
Sbjct: 105 VGGKRKLTIPPEMGYGAEG-AGSIPPDSWLVFDVELLNVK 143
>At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
Pfam profile: PF00254, FKBP-type peptidyl-prolyl
cis-trans isomerases
Length = 694
Score = 36.3 bits (80), Expect = 0.020
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 GVTVETISPGD-ESTYPKSGQTVVVHYTGTLTN-GKKFDSSRDRGKPFKFRIGKSEVIRG 230
GV +E I G + G+ V + YTG L + G FDS+ P +FR+G VI G
Sbjct: 587 GVIIEDIEKGKLDGKSAVKGKKVSILYTGKLKDTGNLFDSNLGED-PLRFRLGGENVIEG 645
Query: 231 WDEGVAKM 254
GV M
Sbjct: 646 LSIGVEGM 653
>At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative
Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans
isomerases
Length = 230
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVT 394
VG + + P+ AYG++G IPPN+T+ D+ELL ++ F T
Sbjct: 179 VGGQRLVIVPPELAYGKKGVQE-IPPNATIELDIELLSIKQSPFGT 223
>At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 545
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
GE A +TC PDYAY + P + + + +++ELL E
Sbjct: 255 GEIALVTCPPDYAYDKFPRPPGVSEGAHVQWEIELLGFE 293
>At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 635
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
GE A +TC PDYAY + P + + + +++ELL E
Sbjct: 345 GEIALVTCPPDYAYDKFPRPPGVSEGAHVQWEIELLGFE 383
>At1g20810.1 68414.m02606 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 1,
chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9LM71)[Arabidopsis thaliana]; similar to SP|P25138
FK506-binding protein (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (EC 5.2.1.8) (Rotamase) {Neisseria
meningitidis}; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 232
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
VG + + P+ YGQ+G IPP +T ++ELLR+
Sbjct: 188 VGGKRTVIVPPEAGYGQKGM-NEIPPGATFELNIELLRV 225
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,613,986
Number of Sequences: 28952
Number of extensions: 299525
Number of successful extensions: 702
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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