Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20223
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6KHN4 Cluster: Segregation of chromosomes protein; n=1...    36   1.4  
UniRef50_A3XRC5 Cluster: Oxidoreductase; n=13; Bacteroidetes|Rep...    35   1.9  
UniRef50_Q2TYZ1 Cluster: Predicted protein; n=2; Aspergillus|Rep...    35   1.9  
UniRef50_UPI00006CBE30 Cluster: hypothetical protein TTHERM_0031...    34   3.3  
UniRef50_Q9W455 Cluster: CG12728-PA; n=2; Drosophila melanogaste...    34   4.4  
UniRef50_Q234T6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_UPI00004985BE Cluster: cortexillin II; n=2; Entamoeba h...    33   7.7  

>UniRef50_Q6KHN4 Cluster: Segregation of chromosomes protein; n=1;
           Mycoplasma mobile|Rep: Segregation of chromosomes
           protein - Mycoplasma mobile
          Length = 974

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 15/46 (32%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = +3

Query: 261 IEFENDSQLLQDGIKLLVQP--ENLKKVNVFEENEKRNLSITLVMS 392
           IE+EN + +L+ GI ++ QP  +++K + +F   EK  ++I+L+ +
Sbjct: 846 IEYENPNDILESGIDIIAQPPGKSIKNLKLFSGGEKSLIAISLLFA 891


>UniRef50_A3XRC5 Cluster: Oxidoreductase; n=13; Bacteroidetes|Rep:
           Oxidoreductase - Leeuwenhoekiella blandensis MED217
          Length = 382

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +1

Query: 112 KLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESKME 261
           K+L+E+    AI F K  GYE+F+T  + L+   F++  +L +L E   E
Sbjct: 99  KVLRETLGDRAINFEKCGGYELFLTTNLELYESCFSQIEYLNELLEPVFE 148


>UniRef50_Q2TYZ1 Cluster: Predicted protein; n=2; Aspergillus|Rep:
           Predicted protein - Aspergillus oryzae
          Length = 1374

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +2

Query: 491 SVDESNILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYE 646
           + +ES  L+NT+N+   EL     K  +++ K +++E  N+EL  N H++ E
Sbjct: 771 AAEESTKLKNTINELRMELGNLDEKRKDLEEKLEESERSNEELTRNKHDLEE 822


>UniRef50_UPI00006CBE30 Cluster: hypothetical protein
           TTHERM_00318620; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00318620 - Tetrahymena
           thermophila SB210
          Length = 1124

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
 Frame = +2

Query: 527 NKKDKELTAYKT----KFGEIQHKHKKTEPFNDELHM-NTHNMYE--THFGESAIPSSI 682
           N+K++ L  Y+T    ++GE  HK KK +P+ D   + N +N Y+    F +   P+SI
Sbjct: 519 NQKNQSLKKYQTSQLIQYGESNHKEKKAKPYLDHKQINNNNNQYDFLDQFQQQYQPNSI 577


>UniRef50_Q9W455 Cluster: CG12728-PA; n=2; Drosophila
           melanogaster|Rep: CG12728-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 477

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 509 ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTH 634
           +L   ++ KDKEL  Y+T+  +++    +T+PF+ E  MN H
Sbjct: 137 LLLGIIHAKDKELNQYRTEGCQLRKVTVETKPFDLEAFMNKH 178


>UniRef50_Q234T6 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1697

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 303  KLLVQPENLKKVN--VFEENEKRNLSITLVMSCGFPFKLKCRLSRVSDEMMFQKITQNLL 476
            +++VQ +N  K N  V EEN+  NL  TL+M       +  +  R + E    +ITQ L 
Sbjct: 912  RMIVQEDNELKQNLKVAEENDNTNLFNTLIMKSNIKNSMLLKSMRNTQEFKNFEITQKLS 971

Query: 477  KIIND 491
            K  N+
Sbjct: 972  KQANN 976


>UniRef50_UPI00004985BE Cluster: cortexillin II; n=2; Entamoeba
           histolytica HM-1:IMSS|Rep: cortexillin II - Entamoeba
           histolytica HM-1:IMSS
          Length = 592

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = +2

Query: 524 LNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGESAIPSSILQKTIVL 703
           + +K+KE   YK    E  HK ++    N+EL+    N+   H  + A  S + ++   L
Sbjct: 351 IERKEKE---YKAAIEEYSHKIEELNKKNEELNCKIENLENEHQKDDAKKSILQEELKKL 407

Query: 704 PQHL*KLNVPARV 742
            + L KLN   +V
Sbjct: 408 KEELEKLNKEIQV 420


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,474,090
Number of Sequences: 1657284
Number of extensions: 14642962
Number of successful extensions: 39390
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39365
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)