Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20223
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M83363-1|AAA36455.1| 1170|Homo sapiens plasma membrane calcium A...    31   5.9  
M25874-1|AAA50819.1| 1205|Homo sapiens calcium ATPase (hPMCA4) p...    31   5.9  
DQ201781-1|ABG24245.1|  110|Homo sapiens PMCA4x protein.               31   5.9  
BX537444-1|CAD97686.1| 1205|Homo sapiens hypothetical protein pr...    31   5.9  
BC150293-1|AAI50294.1| 1164|Homo sapiens ATP2B4 protein protein.       31   5.9  
AL513343-3|CAI17026.1| 1205|Homo sapiens ATPase, Ca++ transporti...    31   5.9  
AL513343-2|CAI17025.1| 1170|Homo sapiens ATPase, Ca++ transporti...    31   5.9  

>M83363-1|AAA36455.1| 1170|Homo sapiens plasma membrane calcium
           ATPase protein.
          Length = 1170

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 300 KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 344


>M25874-1|AAA50819.1| 1205|Homo sapiens calcium ATPase (hPMCA4)
           precursor protein.
          Length = 1205

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 300 KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 344


>DQ201781-1|ABG24245.1|  110|Homo sapiens PMCA4x protein.
          Length = 110

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 16  KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 60


>BX537444-1|CAD97686.1| 1205|Homo sapiens hypothetical protein
           protein.
          Length = 1205

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 300 KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 344


>BC150293-1|AAI50294.1| 1164|Homo sapiens ATP2B4 protein protein.
          Length = 1164

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 300 KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 344


>AL513343-3|CAI17026.1| 1205|Homo sapiens ATPase, Ca++ transporting,
           plasma membrane 4 protein.
          Length = 1205

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 300 KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 344


>AL513343-2|CAI17025.1| 1170|Homo sapiens ATPase, Ca++ transporting,
           plasma membrane 4 protein.
          Length = 1170

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 243 KGKQDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSI 377
           KGK+ G+    +    QDG+ L +QP N ++    EE +K+ + +
Sbjct: 300 KGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKDKKAVKV 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,018,527
Number of Sequences: 237096
Number of extensions: 2268210
Number of successful extensions: 4530
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4530
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)