BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20221
(696 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding pr... 25 1.7
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 25 3.0
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 7.0
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 9.2
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 9.2
>AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding
protein OBPjj5a protein.
Length = 272
Score = 25.4 bits (53), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 296 SFELPESNIDCDTTSRSAFSLSNT 225
+F LP+SN +C T +R S NT
Sbjct: 142 NFHLPKSNRNCRTAARRNHSSRNT 165
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 24.6 bits (51), Expect = 3.0
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 461 LARFHPRCQTAHRRSKKMDSTEPPYSEPRFEEIKKEVSSYIKKI 592
L R+ +TAHR ++ MD++ P ++++ +++I+KI
Sbjct: 36 LGRYELEKETAHRMAESMDTSHKP------NPLEQKTNAHIEKI 73
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 7.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 527 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 619
PP+S +KK+ Y+++ N +A F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.0 bits (47), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 282 WKFETSKYYVTIIDAPG 332
W +E K+ T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 9.2
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 484 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 362
T R AS S P IPA + PVPA QS +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,879
Number of Sequences: 2352
Number of extensions: 16321
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -