Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20220
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 169 3e-43
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 138 5e-34
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 86 4e-18
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 68 1e-12
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 43 4e-05
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 42 6e-05
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 40 5e-04
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 39 8e-04
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 37 0.002
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 35 0.013
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 31 0.16
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 31 0.16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 31 0.21
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 31 0.21
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 30 0.28
SPAC1F8.03c |str3||siderophore-iron transporter Str3 |Schizosacc... 30 0.28
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 30 0.37
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 29 0.48
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 26 4.5
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 4.5
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 4.5
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 26 6.0
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 26 6.0
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 7.9
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 169 bits (411), Expect = 3e-43
Identities = 76/86 (88%), Positives = 83/86 (96%)
Frame = +2
Query: 254 LTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
+TTIPTIGFNVETVEY+NISFTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDRERI E
Sbjct: 43 VTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISE 102
Query: 434 AREELMRMLSEDELRDAVLLIFANKR 511
A EEL RML+EDELRDA+LL+FANK+
Sbjct: 103 AHEELQRMLNEDELRDALLLVFANKQ 128
Score = 105 bits (251), Expect = 8e-24
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 663
+DLPNAMNAAEITDKLGLHSLR+R WYIQATCATSGDGLYEGL+WLS LKN
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNLKN 179
Score = 72.1 bits (169), Expect = 7e-14
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +3
Query: 129 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI*QQFPLL 275
MG + LF+ LFGK+EMRILMVGLDAAGKTTILYKLKLGEI P +
Sbjct: 1 MGLSISKLFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 138 bits (335), Expect = 5e-34
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +2
Query: 251 NLTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 430
++ TIPT+GFNVETV YKNI F VWDVGGQDKIRPLWRHYF T+GLIFVVDS D RI
Sbjct: 46 SVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRIS 105
Query: 431 EAREELMRMLSEDELRDAVLLIFANKR 511
EAR+EL R++S+ E+RD +LL+ ANK+
Sbjct: 106 EARQELHRIISDREMRDCLLLVLANKQ 132
Score = 64.9 bits (151), Expect = 1e-11
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +1
Query: 481 CSTFDLCE*KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 660
C L +DLP A++ A+ITD L L L++R W +Q TCA +GDGL EGL WLS K
Sbjct: 123 CLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQNAK 182
Score = 57.2 bits (132), Expect = 2e-09
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +3
Query: 141 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGE 251
F+ F LF KEMRILM+GLDAAGKTTILYKLKL +
Sbjct: 9 FSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQ 45
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 86.2 bits (204), Expect = 4e-18
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +2
Query: 266 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 445
PT GF + T+E + + FT+WD+GGQ +R W++YF++T+ +I+VVDS D R+ E R
Sbjct: 46 PTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNT 105
Query: 446 LMRMLSEDELRDAVLLIFANK 508
L +L E++L +L+ ANK
Sbjct: 106 LQELLVEEKLLFTSILVLANK 126
Score = 35.1 bits (77), Expect = 0.010
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 511 DLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 660
D+ A+++ EI+ L + ++ +W I + A +G + + + WL+N LK
Sbjct: 128 DVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLK 177
Score = 32.7 bits (71), Expect = 0.052
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +3
Query: 171 KKEMRILMVGLDAAGKTTIL 230
++E+R+L++GLD AGKTTIL
Sbjct: 14 EREVRVLLLGLDNAGKTTIL 33
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 67.7 bits (158), Expect = 1e-12
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +2
Query: 266 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 445
PT+ E + N+ FT +D+GG + R LWR YF G++++VD D ER+ E++ E
Sbjct: 50 PTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAE 109
Query: 446 LMRMLSEDELRDAVLLIFANK 508
L +L+ +EL LI NK
Sbjct: 110 LDALLAMEELARVPFLILGNK 130
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 174 KEMRILMVGLDAAGKTTILYKLK 242
K ++L +GLD AGKTT+L+ LK
Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLK 41
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 43.2 bits (97), Expect = 4e-05
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 263 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 430
I TIG F + T E K + +WD GQ++ R + Y++ G+I V D D++
Sbjct: 38 ISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFN 97
Query: 431 EAREELMRM 457
++ L +
Sbjct: 98 NVKQWLQEI 106
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 42.3 bits (95), Expect = 6e-05
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 LTTIPTIGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERI 427
+TTI I F + T+E K I +WD GQ++ R + Y++ G++ + D D++
Sbjct: 39 ITTIG-IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSF 97
Query: 428 GEAR 439
R
Sbjct: 98 DNVR 101
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 296 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 466
+ K I +WD GQ+K R + R+Y++ G + V D +++ EEL LS+
Sbjct: 58 QQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSF----EELSSWLSD 110
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 38.7 bits (86), Expect = 8e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 269 TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER--IGEARE 442
T+G + + ++ ++DVGGQ R W + F+N +IF V ND ++ A
Sbjct: 179 TLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDYDKKLYERAAP 238
Query: 443 ELMRMLSEDELRDAVL 490
E R++ L D+++
Sbjct: 239 ERNRLVESISLFDSII 254
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 263 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV 403
I T G + ET + +DVGGQ R W H F+N L+F+V
Sbjct: 219 IKTTGISEETFLLNRHHYRFFDVGGQRSERRKWIHCFENVTALLFLV 265
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +3
Query: 168 GKKEMRILMVGLDAAGKTTILYKLKL 245
G ++++L++G +GKTTI+ +++L
Sbjct: 71 GGNDIKVLLLGAGDSGKTTIMKQMRL 96
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 NLTTIPTIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 418
N+ + TIG T ++ K I +WD GQ++ R + Y++ G + V D +
Sbjct: 36 NIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQ 95
Query: 419 ERIGEAREELMRMLSEDELRDAVLLIFANK 508
L + L E + V+++ NK
Sbjct: 96 SSFDNVGRWL-KELREHADSNIVIMLVGNK 124
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 296 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAR---EELMRMLSE 466
E ++ +WD GQ++ + L Y++N I V D + +A+ +EL R E
Sbjct: 60 ENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPE 119
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +2
Query: 305 NISFTVWDVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRE 421
N+ +WD GGQ+ + H F+N Q LI+V D RE
Sbjct: 50 NLVLNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESRE 93
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/59 (22%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 272 IGFNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 442
+ F +T+ +N I+F++WD+GGQ + + + ++F+ D + + + +E
Sbjct: 45 VNFMEKTISIRNTEITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE 103
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 30.7 bits (66), Expect = 0.21
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 293 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---ERIGEAREELMRMLS 463
V+ K ++ +WD GQ++ + L +++ + V + N+ + + R+E + S
Sbjct: 52 VDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS 111
Query: 464 EDE 472
+DE
Sbjct: 112 QDE 114
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 30.3 bits (65), Expect = 0.28
Identities = 15/72 (20%), Positives = 33/72 (45%)
Frame = +2
Query: 293 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 472
+E + + +WD GQ++ R L Y +++ I V D + E+ + + +
Sbjct: 55 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNT-EKWIEDVRAER 113
Query: 473 LRDAVLLIFANK 508
D ++++ NK
Sbjct: 114 GDDVIIVLVGNK 125
>SPAC1F8.03c |str3||siderophore-iron transporter Str3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 30.3 bits (65), Expect = 0.28
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = -3
Query: 223 VVLPAASKPTINILISFLPKRPLNKFANIFPILNYYEYNFPKQSRIKEKTQHQ*IPNNSR 44
+++PA P + I++ +L +R NK NI I+NY + +EK N ++
Sbjct: 246 IIMPAVMTPAV-IILMYL-ERQANKDENIKKIINY---------QTEEK-------NKNK 287
Query: 43 MSKWRRTWKFV 11
SKW++ WK V
Sbjct: 288 QSKWQKLWKAV 298
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 29.9 bits (64), Expect = 0.37
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---ERIGEAREELMRMLS 463
V+ K ++ +WD GQ++ + L +++ + V D N+ E + R+E + S
Sbjct: 52 VDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQAS 111
Query: 464 EDELRDAVLLIFANK 508
++ NK
Sbjct: 112 PSNPETFPFILLGNK 126
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 263 IPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 418
I T+G V + + I F VWD GQ+K+ L Y+ Q I + D R
Sbjct: 39 IATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSR 94
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 186 ILMVGLDAAGKTTILYKLKL 245
I+MVGL +GKTT KL L
Sbjct: 104 IMMVGLQGSGKTTTCSKLAL 123
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 150 LFKGLFGKKEMRILMVGLDAAGKTTI 227
L K ++GK+ + I+ +G AGK+T+
Sbjct: 229 LLKDMYGKEHVNIVFIGHVDAGKSTL 254
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 632 PSYSPSPEVAHVAWMYQLRLRSECRPSLSVISAAFIAFGRSF 507
P+ SP PEV+H W+ L ++ + +L ++ + F G +F
Sbjct: 16 PNSSPDPEVSHKLWVSSL---NKFQYTLPLLISNFAGLGIAF 54
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 364 PPQWSDFVLASNIPHSKTNVFVFY 293
PP+ SDF++ S H + N F F+
Sbjct: 257 PPEVSDFLIKSFYGHVQANFFFFH 280
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 293 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI--FVVDSND 415
V+ +I ++WD GQ++ L + +T ++ F VDS D
Sbjct: 56 VDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRD 98
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 7.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3
Query: 15 NFHVRRHFDIRELLGIHWCC 74
N + HF+ +G +WCC
Sbjct: 469 NHRIPHHFESHTNIGANWCC 488
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,075,623
Number of Sequences: 5004
Number of extensions: 66544
Number of successful extensions: 228
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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