Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20220
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 175 2e-44
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 163 1e-40
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 4e-40
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 141 4e-34
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 133 2e-31
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 124 9e-29
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 118 6e-27
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 99 4e-21
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 97 2e-20
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 79 3e-15
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 74 1e-13
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 70 2e-12
SB_214| Best HMM Match : Arf (HMM E-Value=0) 67 1e-11
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 61 7e-10
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 42 5e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 41 0.001
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 38 0.006
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 36 0.024
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 36 0.032
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 35 0.055
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 35 0.073
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 34 0.096
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 33 0.22
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.39
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 32 0.39
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 32 0.51
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 32 0.51
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 29 3.6
SB_40909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 29 3.6
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 29 4.8
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 29 4.8
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 175 bits (427), Expect = 2e-44
Identities = 80/86 (93%), Positives = 85/86 (98%)
Frame = +2
Query: 254 LTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
+TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GE
Sbjct: 43 VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGE 102
Query: 434 AREELMRMLSEDELRDAVLLIFANKR 511
AREEL RML+EDELRDAVLL+FANK+
Sbjct: 103 AREELNRMLNEDELRDAVLLVFANKQ 128
Score = 108 bits (260), Expect = 4e-24
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 663
+DLPNAMNAAEITDKLGLHSLRNR WYIQATCATSGDGLYEGLDWLSN LK+
Sbjct: 128 QDLPNAMNAAEITDKLGLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLKS 179
Score = 82.2 bits (194), Expect = 4e-16
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = +3
Query: 129 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI*QQFPLL 275
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEI P +
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 163 bits (396), Expect = 1e-40
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = +2
Query: 266 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 445
P GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA+EE
Sbjct: 496 PVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEE 555
Query: 446 LMRMLSEDELRDAVLLIFANKRI 514
L RML+EDELRDAVLL+FANK++
Sbjct: 556 LSRMLAEDELRDAVLLVFANKQL 578
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 161 bits (392), Expect = 4e-40
Identities = 71/86 (82%), Positives = 82/86 (95%)
Frame = +2
Query: 254 LTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
+TTIPTIGFNVE+VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E
Sbjct: 43 VTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNE 102
Query: 434 AREELMRMLSEDELRDAVLLIFANKR 511
++EEL +ML EDEL+DAV+L+ ANK+
Sbjct: 103 SKEELNKMLQEDELKDAVVLVMANKQ 128
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 657
+DLPNA++ +EIT+KLGL S+R+R WYIQA CAT G GLYEGLDWLSN+L
Sbjct: 128 QDLPNALSVSEITEKLGLQSIRDRQWYIQAACATQGTGLYEGLDWLSNEL 177
Score = 70.9 bits (166), Expect = 9e-13
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +3
Query: 129 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEI*QQFPLL 275
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEI P +
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 141 bits (342), Expect = 4e-34
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +2
Query: 254 LTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
+ TIPTIGFNVE VEYKNI FTVWD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI E
Sbjct: 116 VNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQE 175
Query: 434 AREELMRMLSEDELRDAVLLIFANKR 511
A+EEL ++L E+EL+ A LL+ ANK+
Sbjct: 176 AKEELFKLLKEEELKRAALLVLANKQ 201
Score = 79.8 bits (188), Expect = 2e-15
Identities = 30/51 (58%), Positives = 44/51 (86%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 660
+DLP++M+ E+++KL LH+LR+RNWYIQATCA G G+YEGL+WL+ Q++
Sbjct: 201 QDLPDSMSTTELSEKLSLHTLRSRNWYIQATCALKGQGVYEGLEWLAQQIQ 251
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 126 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGE 251
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDE 114
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 133 bits (321), Expect = 2e-31
Identities = 58/86 (67%), Positives = 73/86 (84%)
Frame = +2
Query: 254 LTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
++T+PT+GFNVETV YKNISFTVWD+GGQDKIR LWR Y+Q QG+IFVVDS DRER E
Sbjct: 22 VSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEE 81
Query: 434 AREELMRMLSEDELRDAVLLIFANKR 511
AR EL ++L+E+EL+ +LL+ ANK+
Sbjct: 82 ARNELHKLLAEEELQQVILLVIANKQ 107
Score = 71.3 bits (167), Expect = 7e-13
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 663
+D+ NAM A+EI +KL L+ +R R W++Q+ CA G+GL+EGLDW++ Q++N
Sbjct: 107 QDMANAMTASEIREKLKLNEIRGRPWFVQSACAVKGEGLFEGLDWMATQIRN 158
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3
Query: 192 MVGLDAAGKTTILYKLKLGEI*QQFPLL 275
M+GLD AGKTTILY+LKL E+ P L
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTL 28
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 124 bits (298), Expect = 9e-29
Identities = 55/92 (59%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Frame = +2
Query: 239 QIR*NLTTIPTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND 415
+++ ++TIPTIGFNVET++ KN++ T+WDVGGQDKIRPLWRHYFQ T+GL+FVVDS+D
Sbjct: 40 KLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSD 99
Query: 416 RERIGEAREELMRMLSEDELRDAVLLIFANKR 511
R+ EA+EEL +L DE RD +++ ANK+
Sbjct: 100 VLRMPEAKEELHGVLDSDEFRDVPVVVVANKQ 131
Score = 57.6 bits (133), Expect = 9e-09
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 672
+DLPNA+ A E+ LGL + W++Q CAT+GDGLYE +D + +K+ ++
Sbjct: 131 QDLPNALKAGEMAKHLGLLQHKRNPWHVQEACATNGDGLYEAMDHMVRMVKDFHK 185
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 165 FGKKEMRILMVGLDAAGKTTILYKLKLGEI*QQFPLL 275
FG +++RI+M+GLDAAGKTTILYKLKL E P +
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTI 51
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 118 bits (283), Expect = 6e-27
Identities = 52/92 (56%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Frame = +2
Query: 239 QIR*NLTTIPTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSND 415
+++ + T+PT+ FNVET+ KNI+F+VWD+GGQDKIR LWRHYFQ +G+IFVVDS D
Sbjct: 130 KLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSAD 189
Query: 416 RERIGEAREELMRMLSEDELRDAVLLIFANKR 511
+ERI E REEL R+L EL +++ ANK+
Sbjct: 190 KERIFEVREELTRVLQHSELNGVPVVVVANKQ 221
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLS 648
+DL A+ ++ ++L L+ W IQ TCAT+GDGLYE ++ L+
Sbjct: 221 QDLLGAIGPDKMAEELSLYKHTKNPWRIQGTCATAGDGLYEAMEALA 267
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 98.7 bits (235), Expect = 4e-21
Identities = 42/62 (67%), Positives = 54/62 (87%)
Frame = +2
Query: 326 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFAN 505
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EAR+EL R++++ E++D ++LIFAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 506 KR 511
K+
Sbjct: 203 KQ 204
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -3
Query: 466 FAEHPHELFACLADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTNVF 302
F L + L +T PI T+Y ED L +M PQ +DFVL+SNI K ++
Sbjct: 70 FQARTQGLCSGLINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNILRDKKKLY 124
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 96.7 bits (230), Expect = 2e-20
Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +2
Query: 233 QTQIR*NLTTIPTIGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 409
+ + R + T+PT FNVET+ +K I F VWD+GG+++ RPLW+ Y + T +I+VVDS
Sbjct: 40 RNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDS 99
Query: 410 NDRERIGEAREELMRMLSEDELRDAVLLIFANKRIC 517
++ EAR+EL +L+ +L A +LIFANK+ C
Sbjct: 100 TSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDC 135
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRN-WYIQATCATSGDGLYEGLDWLSNQL 657
+D PNA+ EIT L LH L R+ W++Q A G+GL +GL LS +
Sbjct: 133 QDCPNAIPPREITHMLSLHDLNARHLWFVQPCSALLGEGLLDGLRALSEMI 183
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 129 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEI*QQFPLLA 278
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E P A
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTA 54
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/61 (54%), Positives = 48/61 (78%)
Frame = +2
Query: 329 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 508
+ GQ IRP WR Y+ NT +I+VVDS D++RIG +++EL+ ML EDEL+ A+L++FANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 509 R 511
+
Sbjct: 213 Q 213
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 642
+D+ AM+++E+++ LGL +L++R W I T A G+GL E ++W
Sbjct: 213 QDMEGAMSSSEVSNALGLSALKSRTWAIFKTSAVKGEGLDEAMEW 257
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 74.1 bits (174), Expect = 1e-13
Identities = 27/83 (32%), Positives = 51/83 (61%)
Frame = +2
Query: 263 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 442
IPT+GFN+ V N++ VWD+GGQ + R +W Y + ++++VD+ D +++ ++
Sbjct: 50 IPTVGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKN 109
Query: 443 ELMRMLSEDELRDAVLLIFANKR 511
EL +L + +L +L+ NK+
Sbjct: 110 ELHNLLEKPQLAGIPILVLGNKK 132
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 153 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGE 251
FK LF K+EM + +VGL +GKTT + + G+
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNR 579
KDLPN+++ E+ ++L L S+++R
Sbjct: 132 KDLPNSLDEKELVERLNLTSVQDR 155
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/85 (35%), Positives = 52/85 (61%)
Frame = +2
Query: 257 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 436
+T T GFNV + ++ +W++GG +K R W ++ +TQ L++VVDS+D +R E+
Sbjct: 196 STTKTEGFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNES 255
Query: 437 REELMRMLSEDELRDAVLLIFANKR 511
R+ L +LS L +L+ A+K+
Sbjct: 256 RDNLKSLLSNSLLNGVPVLLVASKQ 280
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 177 EMRILMVGLDAAGKTTILYKLKLGE 251
E RIL++GLD +GK+ L L G+
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGD 190
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 70.1 bits (164), Expect = 2e-12
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +2
Query: 275 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 385
GFNVETVE++++ FT+WDVGG K+RPLWRHY+ NTQ
Sbjct: 222 GFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/82 (32%), Positives = 50/82 (60%)
Frame = +2
Query: 263 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 442
+PT+ E + + FT +D+GG + R +W+ YF G++F++D D ER+ E+++
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 443 ELMRMLSEDELRDAVLLIFANK 508
EL +L++++L +LI NK
Sbjct: 65 ELDSLLADEQLSSCPVLILGNK 86
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +2
Query: 320 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 469
+WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ + + EL +L E+
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +2
Query: 302 KNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 478
KN+ F VWD+GGQ +R +HYF + GLI+VVDS D +R+ EA +L+ +L E +
Sbjct: 16 KNVHFAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMV 70
Query: 479 DAVLLIFANKR 511
D +++ ANK+
Sbjct: 71 DVPVVVVANKQ 81
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 651
+DLPN + A +I + LGL L+ ++Q A++GDGL E WL N
Sbjct: 81 QDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKWLPN 128
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 PTIGFNVETVEYKN-ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 442
PT GFN+++V+ K VWD+GGQ KIRP W++YF+NT L
Sbjct: 47 PTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPYWKNYFENTDIL----------------- 89
Query: 443 ELMRMLSEDELRDAVLLIFANKR 511
EL +L E++L LL+FANK+
Sbjct: 90 ELDELLEEEKLIGVPLLVFANKQ 112
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGL 624
+DL NA AEI+ LGL+++R+R W IQ A +G+G+
Sbjct: 112 QDLMNAATPAEISSNLGLNTIRSRGWQIQGCSALTGEGV 150
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 174 KEMRILMVGLDAAGKTTILYKL 239
+EMRIL++GLD +GKTTIL L
Sbjct: 16 REMRILLLGLDNSGKTTILKSL 37
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +2
Query: 290 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 469
TVE +WD GQ++ R L Y++ QG+I V D+N RE + E L +
Sbjct: 51 TVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYS 110
Query: 470 ELRDAVLLIFANK 508
+D V ++ NK
Sbjct: 111 TKKDIVKMLVGNK 123
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 263 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 430
I TIG F + T+E K I +WD GQ++ R + Y++ G+I V D D+E
Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFN 118
Query: 431 EAREELMRM 457
++ L +
Sbjct: 119 NVKQWLQEI 127
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +2
Query: 257 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 436
T + T G +K++ F ++DVGGQ R W H F+ +IF V + + +
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAE 236
Query: 437 REELMRMLSEDELRDAV 487
EE+ RM+ +L D++
Sbjct: 237 DEEMNRMMESMKLFDSI 253
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 257 TTIPTIGFNVE----TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 421
T I TIG + + TV+ K I +WD GQ++ R L Y+++ G++ + D N+ E
Sbjct: 36 TYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESE 94
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 PTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
PTIG F ++TV+ + + +WD GQ++ R + + Y+ N G+I D +++ E
Sbjct: 38 PTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSF-E 96
Query: 434 AREELMRMLSEDELRDAVLLIFANK 508
+ + + + +D ++ I NK
Sbjct: 97 SLPQWLDDTNRYTSKDVLIAIVGNK 121
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 PTIG--FNVETVEYKN---ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 421
PT+G F+V +E K I +WD GQ++ R + Y++NT G + + D +R+
Sbjct: 44 PTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRD 100
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 123 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLK 242
F+M + + L+K LF K E IL++GLD AGKTT+L ++K
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
Score = 36.3 bits (80), Expect = 0.024
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 269 TIGFNVETVEYKNISFTVWDVGGQDKIRPLW 361
T+G N+ + ++ WD+GGQ ++R LW
Sbjct: 60 TVGLNIGKITISHVKLMFWDLGGQQELRTLW 90
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 257 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 436
T + T G +YK + F ++DVGGQ R W H F++ +I+ V + + E
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEE 285
Query: 437 REELMRMLSEDELRDAVL 490
E RM +L ++++
Sbjct: 286 DESTNRMEESLKLFESII 303
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +2
Query: 257 TTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 436
T + T G +YK + F ++DVGGQ R W H F++ +I+ V + + E
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEE 237
Query: 437 REELMRMLSEDELRDAVL 490
E RM +L ++++
Sbjct: 238 DESTNRMEESLKLFESII 255
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +2
Query: 263 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 430
I TIG F + T+ + + +WD GQ++ R + Y++ T G+I V D +
Sbjct: 7 ITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFV 66
Query: 431 EAREELMRMLSEDELRDAVLLIFANKRIC 517
+ L + + D + ++ NK C
Sbjct: 67 NVKRWLHEI--DQNCDDVIRILVGNKDDC 93
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 275 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL-- 448
G + V K++ +WD GQ++ R + R Y++ G + V D + RE L
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD 192
Query: 449 MRMLSEDELRDAVLLIFANKR 511
R L+ + V+++ NK+
Sbjct: 193 ARTLASPNI---VIILVGNKK 210
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Frame = +2
Query: 266 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSND 415
PT G + + I F + DVGGQ R W H F+N ++F +V+S+
Sbjct: 179 PTSGIIEYPFDLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDS 238
Query: 416 RERIGEAREELMRMLSEDELRDAVLLIFANKR 511
R+ E++ +++ +++ +++F NK+
Sbjct: 239 ENRMEESKALFRTIITYPWFQNSSIILFLNKK 270
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 526 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 657
++ +TD L ++ L NR W + C + DGL EG+ WL Q+
Sbjct: 179 LSCVRVTDMLQMNKL-NRPWQVNMMCVENLDGLLEGMTWLLKQV 221
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 266 PTIG--FNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGE 433
PTIG F +TV + + +WD GQ++ R L Y ++++ + V D + E
Sbjct: 194 PTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSF-E 252
Query: 434 AREELMRMLSEDELRDAVLLIFANK 508
+ + ++M+ ++ AV++I NK
Sbjct: 253 SVGDWVKMVRDERGEKAVIIIVGNK 277
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 272 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 451
+G V + + WD GQ+K R + + Y++N +I V D +R + LM
Sbjct: 48 VGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLM 107
Query: 452 RM 457
+
Sbjct: 108 NV 109
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 272 IGFNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 421
I F V+TV K + +WD GQ++ R + Y++ G I + D + E
Sbjct: 56 IDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEE 107
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 221 HNSVQTQIR*NLTTIPTIGFNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLI 394
H Q + + T + F ++T+ I+ +WD GQ++ R + + YF+ G++
Sbjct: 914 HRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGIL 973
Query: 395 FVVD 406
D
Sbjct: 974 IFYD 977
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 35.1 bits (77), Expect = 0.055
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 293 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 472
VE K I VWD GQ++ R + Y++ G + V D ++ + L+ + +
Sbjct: 56 VEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHAD 115
Query: 473 LRDAVLLI 496
V+L+
Sbjct: 116 PTIVVMLV 123
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 34.7 bits (76), Expect = 0.073
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +2
Query: 269 TIG--FNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA 436
TIG F +TV + + F +WD GQ++ L Y++ Q I V D +++ A
Sbjct: 53 TIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARA 112
Query: 437 R---EELMRMLS 463
+ +EL R S
Sbjct: 113 KTWVKELQRQAS 124
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 34.3 bits (75), Expect = 0.096
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 272 IGFNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 406
+ F ++T V+ K + +WD GQ++ R + + YF+ G++ + D
Sbjct: 477 VDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYD 523
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/69 (18%), Positives = 30/69 (43%)
Frame = +2
Query: 302 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 481
K I +WD GQ++ + Y++ G++ V D + + + ++ + + D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANED 61
Query: 482 AVLLIFANK 508
++ NK
Sbjct: 62 VKRMLVGNK 70
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 320 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 487
V DVGGQ R W H+F ++F + + E E+ ML +L + +
Sbjct: 166 VIDVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEI 221
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 32.3 bits (70), Expect = 0.39
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 302 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 406
+++ +WD GQ++ R + + Y+++ G+I D
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +2
Query: 302 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 457
+ I +WD GQ++ R L +F++ G + V D + R L ++
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +2
Query: 293 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 472
V K F +WD GQ++ + L Y+++ I V D R +R L
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQRYG 62
Query: 473 LRDAVLLIFANK 508
+D V+ + NK
Sbjct: 63 PQDIVIAVAGNK 74
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +1
Query: 508 KDLPNAMNAAEITDKLGLHSLRNRNWYIQ 594
+D+ +M+ AEI+++L L +++ W+IQ
Sbjct: 60 QDIKGSMSVAEISEQLNLACIKDHGWHIQ 88
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 168 GKKEMRILMVGLDAAGKTTILYKLKL 245
G M++++VG +A GKTT++++L L
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLML 573
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 302 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 406
K I T+ D GQ++ + YF+ QG+ V D
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFD 433
>SB_40909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 121 YYEYNFPKQSRIKEKTQHQ*IPNNSRMSKWRRTWKFVPRA 2
Y +Y P SR K + + S WRR W ++ +A
Sbjct: 9 YSKYRSPLTSRYASKEMAYCFSEDKKFSTWRRLWLYLAKA 48
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 317 TVWDVGGQDKIRPLWRHYF 373
TV+D+GG KIR +W+ Y+
Sbjct: 7 TVYDLGGGAKIRGIWKDYY 25
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 386 GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLI 496
G++FVVD+++RER+ E R L + LLI
Sbjct: 38 GVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 308 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 418
I F VWD GQ+K L Y+ Q I + D R
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR 117
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 266 PTIG--FNVETVEYKN---ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 406
PTIG F ++T+++ I +W + GQ++ + R Y++ + + D
Sbjct: 49 PTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFD 100
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 247 PNLSLYRIVVLPAASKPTINILIS-FLPKRPLNKFANIFPILNYY 116
P+ +L + + P S TI L+S +LP +PL + I +LN+Y
Sbjct: 455 PSNALKCLDIHPLPSSSTITFLLSHYLPPQPLPSSSAITFLLNHY 499
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 177 EMRILMVGLDAAGKTTILYKLKLGEI 254
E RI +VG + +GKTT+L K+ LGE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,127,975
Number of Sequences: 59808
Number of extensions: 495431
Number of successful extensions: 1218
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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