Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20219
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   1.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   3.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.9  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 248 IQEDTHPKKVNLGVGAY 298
           + E   P K+NLG+G+Y
Sbjct: 249 LDEGAPPSKINLGLGSY 265


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 248 IQEDTHPKKVNLGVGAY 298
           + E   P K+NLG+G+Y
Sbjct: 249 LDEGAPPSKINLGLGSY 265


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 248 IQEDTHPKKVNLGVGAY 298
           + E   P K+NLG+G Y
Sbjct: 248 LDEGAPPSKINLGLGTY 264


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +1

Query: 451 PCHQK*EQLYCTDTVRHWRFRLGLEF 528
           P + K EQ       RHW+  LG  F
Sbjct: 330 PLYLKHEQQGAAPDYRHWQIPLGRRF 355


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 157 IVSTLLGLSTWVVNFFNT*AIFTKLSNTGKIITN 56
           I S+ L ++TW +   +  AI +KL   GK+ T+
Sbjct: 491 IKSSFLDINTWKMLVKSFDAIDSKLQTGGKVETS 524


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 385 ILMIESSTMENFFCLSDRRQNKWFSLIISICSNTKIYFFRMCVLLYAS 242
           ILM+ +  +  F CL   R   ++ ++    SN +I F     +LY S
Sbjct: 291 ILMLGTVVLAFFICLLPFRALTFWIIVAPAGSNFEIGFENYYNILYFS 338


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 305 DEGKPFVLPSVRKAEEILHSRGLNHEYAPISG 400
           D+GK F   S  K   I      NH+   I G
Sbjct: 253 DQGKKFAYNSTVKVAVIYGGTSTNHQRGRILG 284


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 426 LNWLLEKTALSSKIRATVLYRHCPALALPPWTRVHNETL 542
           +N L ++  LS+    TVL    P LALP      N  L
Sbjct: 374 INNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNRIL 412


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 426 LNWLLEKTALSSKIRATVLYRHCPALALPPWTRVHNETL 542
           +N L ++  LS+    TVL    P LALP      N  L
Sbjct: 266 INNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNRIL 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,478
Number of Sequences: 336
Number of extensions: 4948
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)