Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20219
         (742 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   5.7  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   5.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.9  

>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 57  LVIILPVLDSFVKMAQVLKKLTTQVLK 137
           + +I+P   +  K+ Q++ KLT++V+K
Sbjct: 301 MYVIMPNNSNRAKLQQLIPKLTSEVVK 327


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 686 SSSAPCKSK-PLVLGSK*RYFLCGKLRVLQICGWFPQV 576
           SS  P K   P+  G+K     CG+   LQ CG   Q+
Sbjct: 188 SSVRPSKGLIPVAPGAKCPITTCGRNEALQACGTCNQI 225


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 369 PLLWRISSAFLT--EGKTNGFPSSSLYAPTPRFTFLGCVSSCMLL*CLRLHLADPS 208
           P  W+     L   +GK  G   SS Y P      LG V   ++L  L  HL +PS
Sbjct: 526 PAQWKRQRLVLLPKQGKPPG--ESSSYRPLCMLDALGKVLERLILNRLNEHLEEPS 579


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = -2

Query: 330 GKTNGFPSSSLYAPTPRFTFLGCVSSCMLL*CLRLHLADP 211
           GK  G   SS Y P      LG V   ++L  L  HL DP
Sbjct: 495 GKPPG--ESSSYRPLSMLDALGKVLEQLILNRLNKHLEDP 532


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 873,364
Number of Sequences: 2352
Number of extensions: 19732
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)