Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20219
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 104 6e-23
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 104 6e-23
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 96 2e-20
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.023
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 36 0.023
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 36 0.023
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 29 4.6
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 104 bits (250), Expect = 6e-23
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = +2
Query: 245 SIQEDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAV 424
+ + D++PKK+NLGVGAYRDD+GKPFVLPSV++AE + + L+ EYA I G +T
Sbjct: 35 AFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIAANLDKEYAGIVGLPEFTKLS 94
Query: 425 AKLAFGEDSPVIKNKSNCTVQTLSGTGASALDS 523
A+LA GE+S VIKNK T Q++SGTGA + S
Sbjct: 95 AQLALGENSDVIKNKRIFTTQSISGTGALRIGS 127
Score = 75.8 bits (178), Expect = 3e-14
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 RLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDI 690
R+G EF++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI
Sbjct: 124 RIGSEFLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADI 182
Query: 691 SKFPKVPYSVARV-AHNP 741
++ P+ + AHNP
Sbjct: 183 AQIPEGSTILLHACAHNP 200
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 168 TGLRASSTWWNNVQMGPPDVILGITEAYKRTHILKK 275
T +R S WW++V+MGPPD ILG+TEA+K KK
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKK 44
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 104 bits (250), Expect = 6e-23
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = +2
Query: 245 SIQEDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAV 424
+ + D++PKK+NLGVGAYRDD+GKPFVLPSV++AE + + L+ EYA I G +T
Sbjct: 35 AFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIAANLDKEYAGIVGLPEFTKLS 94
Query: 425 AKLAFGEDSPVIKNKSNCTVQTLSGTGASALDS 523
A+LA GE+S VIKNK T Q++SGTGA + S
Sbjct: 95 AQLALGENSDVIKNKRIFTTQSISGTGALRIGS 127
Score = 75.8 bits (178), Expect = 3e-14
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 RLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDI 690
R+G EF++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI
Sbjct: 124 RIGSEFLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADI 182
Query: 691 SKFPKVPYSVARV-AHNP 741
++ P+ + AHNP
Sbjct: 183 AQIPEGSTILLHACAHNP 200
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 168 TGLRASSTWWNNVQMGPPDVILGITEAYKRTHILKK 275
T +R S WW++V+MGPPD ILG+TEA+K KK
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKK 44
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/88 (50%), Positives = 65/88 (73%)
Frame = +2
Query: 245 SIQEDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNHEYAPISGEATYTDAV 424
+ ++DT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ + ++ EY+ I+G +
Sbjct: 40 AFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAKMDKEYSTITGVPEFAPLA 99
Query: 425 AKLAFGEDSPVIKNKSNCTVQTLSGTGA 508
AKLAFG++S VI++ T Q++SGTGA
Sbjct: 100 AKLAFGDNSEVIRDGRVFTTQSISGTGA 127
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 511 RLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDI 690
R+G +F+ K + +K ++ PTPTW NH + L + YRY++ +T GFD++GALEDI
Sbjct: 129 RIGGQFVEK-FIPSKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDI 187
Query: 691 SKFPKVPYSVARV-AHNP 741
SK P+ + AHNP
Sbjct: 188 SKMPEGSVILLHACAHNP 205
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 192 WWNNVQMGPPDVILGITEAYKR 257
W+ NV + P D ILG+TEA+K+
Sbjct: 22 WFRNVPLAPADPILGVTEAFKK 43
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 EDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHSRGLNHEYAPISGEATYTDAVAK 430
++T P KVNL +GAYR +EG+P+VLP V + E EI + LNHEY P+ G + A +
Sbjct: 24 DETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATE 83
Query: 431 LAFGEDSPVIKNKSNCTVQTLSGTGA 508
L G +SP IK + + VQ LSGTGA
Sbjct: 84 LVLGAESPAIKEERSFGVQCLSGTGA 109
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 511 RLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALED 687
R G EF+ K +++ PTWGNH + Y ++D ++ L D
Sbjct: 111 RAGAEFLAS-VCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSD 169
Query: 688 ISKFPKVPYSVAR-VAHNP 741
+ P+ + AHNP
Sbjct: 170 LESAPEKSVIILHGCAHNP 188
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 QEDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHSRGLNHEYAPISGEATYTDAVA 427
Q++ P K+NL + AYR ++G+P+VLP VR+ E + H NHEY PI G + +
Sbjct: 25 QKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHEPHHNHEYLPILGHDGFCKSAT 84
Query: 428 KLAFGEDSPVIKNKSNCTVQTLSGTGA 508
L G DS IK + +VQ +SGTGA
Sbjct: 85 ALLLGNDSLAIKEGRSFSVQCISGTGA 111
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -2
Query: 513 AEAPVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLT 334
+ +P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T
Sbjct: 32 SSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPST 89
Query: 333 EGKTNGFPSSSLYA 292
G T+G SSS YA
Sbjct: 90 VGSTSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -2
Query: 513 AEAPVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLT 334
+ +P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T
Sbjct: 239 SSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPST 296
Query: 333 EGKTNGFPSSSLYA 292
G T+G SSS YA
Sbjct: 297 VGSTSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = -2
Query: 513 AEAPVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLT 334
+ +P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T
Sbjct: 239 SSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPST 296
Query: 333 EGKTNGFPSSSLYA 292
G T+G SSS YA
Sbjct: 297 VGSTSGAASSSSYA 310
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -1
Query: 430 FSYSISICGLTTDGSILMIESSTMENFFCLSDRRQNKWFSLIISICSNTKIYFF 269
F+ S +I G T GSI +I MEN ++ W ++ I+ N IY +
Sbjct: 182 FTISRTIVGFFTGGSISIINVFIMENI----PKKHRMWINMAITWSPNMPIYSY 231
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +1
Query: 565 LPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKFPKVPYSVARVAHNP 741
LP PT P IC T + D T AL + +K P+V + A NP
Sbjct: 4 LPPPTPPRKPNICGTSGNSNGINENIDTSTFSVSAAKALFESAKRPEVRNAAIAAAKNP 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,112,344
Number of Sequences: 27780
Number of extensions: 441810
Number of successful extensions: 1268
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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