Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20218
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 281 VQPICLEHLYLNSLL*YYFISS 216
           +Q  CL    LN+L+ YY IS+
Sbjct: 382 IQYFCLMARCLNTLIFYYHIST 403


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -3

Query: 439 DNLPGCICEHSIFVDNSSSKFGGLWKNIYRCHLSSS-----LHFEMF*LQS 302
           ++LPGC    S     +  +F  L ++ +  HL+S+     LHF    L+S
Sbjct: 373 ESLPGCHMVDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKS 423


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -3

Query: 439 DNLPGCICEHSIFVDNSSSKFGGLWKNIYRCHLSSS-----LHFEMF*LQS 302
           ++LPGC    S     +  +F  L ++ +  HL+S+     LHF    L+S
Sbjct: 380 ESLPGCHMVDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKS 430


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 35  FFRRLFHIPNSNINY 79
           F+ R F + NSN NY
Sbjct: 268 FYGRTFTLSNSNTNY 282


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 304 TEARTSQNAKKRTNDTCKCFSKGHQ 378
           TEA     A  +  D C+   K HQ
Sbjct: 296 TEAEVRAAAANKVKDFCQNLDKAHQ 320


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 554 IFWGCGFLCIFCVPTVYFL 498
           I WG  FL +  + TV+F+
Sbjct: 53  IEWGVKFLKVVTIITVFFV 71


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 554 IFWGCGFLCIFCVPTVYFL 498
           I WG  FL +  + TV+F+
Sbjct: 53  IEWGVKFLKVVTIITVFFV 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,873
Number of Sequences: 336
Number of extensions: 2622
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)