Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20218
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   1.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.7  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 421  ICEHSIFVDNSSSKFGGLWKNIYRCHLSSSLHFEMF 314
            + E  + ++N S  +  LW+NI+R  LSS     +F
Sbjct: 926  LLEPKVSLENPSVNWRLLWRNIHRSCLSSLQRSTLF 961


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 150 QNKHGKQGVQQGPLKAKPQVMDARNKIISKKRIQIQMLETNWLN 281
           Q K+   G+QQ P +     MD   +   ++R Q+Q  E N LN
Sbjct: 687 QPKYRSYGLQQKPPRYLQVSMDELKRHTQQRREQLQR-ELNELN 729


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,381
Number of Sequences: 2352
Number of extensions: 11130
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)