Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20218
         (666 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    32   0.81 
AY089369-1|AAL90107.1|  251|Drosophila melanogaster AT19154p pro...    28   9.9  
AE014134-822|AAF52184.1|  251|Drosophila melanogaster CG8885-PA ...    28   9.9  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
            protein.
          Length = 1053

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = +2

Query: 266  DKLAE-LAKQRDARLKLEHLKMQRRGQMTPVNVFPKATKFTRTVVNK 403
            D+LAE LAK  D R  + + K+QRRG+ + + V P+A K+  +V+N+
Sbjct: 909  DELAENLAKTYDLRKGVLYRKVQRRGRTSYLPVVPRAFKW--SVINQ 953


>AY089369-1|AAL90107.1|  251|Drosophila melanogaster AT19154p
           protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 561 SENFLGLWIFMYFLCTNC 508
           SE+FLG W+ +YF  T+C
Sbjct: 96  SEDFLGKWLLIYFGFTHC 113


>AE014134-822|AAF52184.1|  251|Drosophila melanogaster CG8885-PA
           protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 561 SENFLGLWIFMYFLCTNC 508
           SE+FLG W+ +YF  T+C
Sbjct: 96  SEDFLGKWLLIYFGFTHC 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,532,537
Number of Sequences: 53049
Number of extensions: 443741
Number of successful extensions: 1336
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)