Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20217
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7274 Cluster: PREDICTED: similar to CG2611-PA;...    55   2e-06
UniRef50_UPI00005844DA Cluster: PREDICTED: similar to RIKEN cDNA...    51   4e-05
UniRef50_Q6DET5 Cluster: MGC89669 protein; n=6; Tetrapoda|Rep: M...    51   4e-05
UniRef50_Q96A57 Cluster: UPF0414 transmembrane protein C20orf30;...    51   4e-05
UniRef50_O64568 Cluster: Expressed protein; n=6; Magnoliophyta|R...    43   0.007
UniRef50_Q7JNC1 Cluster: Putative uncharacterized protein; n=2; ...    35   2.5  
UniRef50_UPI0000E22BB4 Cluster: PREDICTED: hypothetical protein;...    34   3.3  
UniRef50_Q9LVP2 Cluster: Emb|CAB43660.1; n=2; core eudicotyledon...    34   3.3  
UniRef50_Q9H6X4 Cluster: Transmembrane protein 134; n=19; Eutele...    34   3.3  
UniRef50_Q05B54 Cluster: Transmembrane protein 134; n=9; Eutheri...    34   3.3  
UniRef50_Q9W073 Cluster: CG12025-PA; n=5; Endopterygota|Rep: CG1...    33   5.7  

>UniRef50_UPI0000DB7274 Cluster: PREDICTED: similar to CG2611-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG2611-PA
           - Apis mellifera
          Length = 131

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           F+PGAYH+R+A  AY++ PGYSF DIPEFD
Sbjct: 102 FIPGAYHMRVAILAYQKVPGYSFDDIPEFD 131


>UniRef50_UPI00005844DA Cluster: PREDICTED: similar to RIKEN cDNA
           5730494N06 gene; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to RIKEN cDNA 5730494N06 gene -
           Strongylocentrotus purpuratus
          Length = 155

 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           F+PGAYH+R+A  AYK Y GYSF DIP+++
Sbjct: 125 FIPGAYHVRLACYAYKGYKGYSFEDIPDYE 154


>UniRef50_Q6DET5 Cluster: MGC89669 protein; n=6; Tetrapoda|Rep:
           MGC89669 protein - Xenopus tropicalis (Western clawed
           frog) (Silurana tropicalis)
          Length = 120

 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90  FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119


>UniRef50_Q96A57 Cluster: UPF0414 transmembrane protein C20orf30;
           n=31; Eumetazoa|Rep: UPF0414 transmembrane protein
           C20orf30 - Homo sapiens (Human)
          Length = 120

 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90  FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119


>UniRef50_O64568 Cluster: Expressed protein; n=6; Magnoliophyta|Rep:
           Expressed protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 103

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIP 91
           F+PG Y+ RIAY AYK Y G+SF++IP
Sbjct: 75  FIPGFYYTRIAYYAYKGYKGFSFSNIP 101


>UniRef50_Q7JNC1 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 168

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           F+PG YH+    C     PGYSF  +P F+
Sbjct: 138 FIPGFYHVYYVTCTLCGRPGYSFDKLPTFN 167


>UniRef50_UPI0000E22BB4 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 191

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 14  LPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           +PG YH+   YCA K + G+ F  +P F+
Sbjct: 162 VPGVYHVIFIYCAVKGHRGFQFFYLPYFE 190


>UniRef50_Q9LVP2 Cluster: Emb|CAB43660.1; n=2; core
           eudicotyledons|Rep: Emb|CAB43660.1 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 121

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEF 97
           FLPG Y  RIAY +++   GY F  IP +
Sbjct: 93  FLPGFYETRIAYYSWRGAEGYRFAAIPSY 121


>UniRef50_Q9H6X4 Cluster: Transmembrane protein 134; n=19;
           Euteleostomi|Rep: Transmembrane protein 134 - Homo
           sapiens (Human)
          Length = 195

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 14  LPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           +PG YH+   YCA K + G+ F  +P F+
Sbjct: 166 VPGVYHVIFIYCAVKGHRGFQFFYLPYFE 194


>UniRef50_Q05B54 Cluster: Transmembrane protein 134; n=9;
           Eutheria|Rep: Transmembrane protein 134 - Bos taurus
           (Bovine)
          Length = 195

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 14  LPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
           +PG YH+   YCA K + G+ F  +P F+
Sbjct: 166 VPGVYHVIFIYCAVKGHRGFQFFYLPYFE 194


>UniRef50_Q9W073 Cluster: CG12025-PA; n=5; Endopterygota|Rep:
           CG12025-PA - Drosophila melanogaster (Fruit fly)
          Length = 170

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 11  FLPGAYHIRIAYCAYKQYPGYSFTDIPEF 97
           F+PGAYH+   + A K Y G+ F  +P F
Sbjct: 141 FIPGAYHVVYIWLAAKGYRGFDFYHLPLF 169


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,342,076
Number of Sequences: 1657284
Number of extensions: 9948458
Number of successful extensions: 16217
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16214
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)