Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20217
(754 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110408-1|AAI10409.2| 120|Homo sapiens chromosome 20 open read... 51 5e-06
BC070212-1|AAH70212.1| 120|Homo sapiens C20orf30 protein protein. 51 5e-06
BC015113-1|AAH15113.1| 120|Homo sapiens chromosome 20 open read... 51 5e-06
BC009770-1|AAH09770.1| 120|Homo sapiens chromosome 20 open read... 51 5e-06
BC009769-1|AAH09769.1| 120|Homo sapiens chromosome 20 open read... 51 5e-06
BC009768-1|AAH09768.1| 120|Homo sapiens chromosome 20 open read... 51 5e-06
AY359115-1|AAQ89473.1| 120|Homo sapiens HSPC274 protein. 51 5e-06
AL121924-3|CAI22630.1| 183|Homo sapiens chromosome 20 open read... 51 5e-06
AL121924-1|CAI22627.1| 120|Homo sapiens chromosome 20 open read... 51 5e-06
AL121890-3|CAI19216.1| 183|Homo sapiens chromosome 20 open read... 51 5e-06
AL121890-1|CAI19213.1| 120|Homo sapiens chromosome 20 open read... 51 5e-06
BC011990-1|AAH11990.1| 120|Homo sapiens chromosome 20 open read... 48 3e-05
BC125134-1|AAI25135.1| 180|Homo sapiens transmembrane protein 1... 34 0.48
AK025402-1|BAB15126.1| 195|Homo sapiens protein ( Homo sapiens ... 34 0.48
>BC110408-1|AAI10409.2| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>BC070212-1|AAH70212.1| 120|Homo sapiens C20orf30 protein protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>BC015113-1|AAH15113.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>BC009770-1|AAH09770.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>BC009769-1|AAH09769.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>BC009768-1|AAH09768.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>AY359115-1|AAQ89473.1| 120|Homo sapiens HSPC274 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>AL121924-3|CAI22630.1| 183|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 183
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 153 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 182
>AL121924-1|CAI22627.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>AL121890-3|CAI19216.1| 183|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 183
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 153 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 182
>AL121890-1|CAI19213.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 50.8 bits (116), Expect = 5e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y GYS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRGYSYDDIPDFD 119
>BC011990-1|AAH11990.1| 120|Homo sapiens chromosome 20 open reading
frame 30 protein.
Length = 120
Score = 48.4 bits (110), Expect = 3e-05
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +2
Query: 11 FLPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
FLPG YH+RIAY A K Y YS+ DIP+FD
Sbjct: 90 FLPGFYHLRIAYYASKGYRAYSYDDIPDFD 119
>BC125134-1|AAI25135.1| 180|Homo sapiens transmembrane protein 134
protein.
Length = 180
Score = 34.3 bits (75), Expect = 0.48
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 14 LPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
+PG YH+ YCA K + G+ F +P F+
Sbjct: 151 VPGVYHVIFIYCAVKGHRGFQFFYLPYFE 179
>AK025402-1|BAB15126.1| 195|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21749 fis, clone COLF5897. ).
Length = 195
Score = 34.3 bits (75), Expect = 0.48
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 14 LPGAYHIRIAYCAYKQYPGYSFTDIPEFD 100
+PG YH+ YCA K + G+ F +P F+
Sbjct: 166 VPGVYHVIFIYCAVKGHRGFQFFYLPYFE 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,259,443
Number of Sequences: 237096
Number of extensions: 1534283
Number of successful extensions: 1750
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1750
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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