Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20216
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   1.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   1.8  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.6  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 121  KSKICDTHSDFIMNRRRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
            +S+   + +D I  R R  +     ERL R  RRV  NQ + + LS
Sbjct: 1166 RSRSAPSEADTIRRRMRRRE----MERLRRTARRVPSNQGVREVLS 1207


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 166 RRGHDDEEGYERLHRKRRRVSENQ 237
           +RG  D++GY+R   K  R ++N+
Sbjct: 532 KRGKKDDKGYDRRSGKEERSNDNR 555


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 404 EMYNLCNSCWFVECKEL*LWWRIC 475
           + YN    C+F+  K + L +R+C
Sbjct: 477 DRYNFVTECFFMTHKAIDLGYRVC 500


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,826
Number of Sequences: 2352
Number of extensions: 13104
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)