Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20216
(733 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051796-1|AAK93220.1| 800|Drosophila melanogaster LD31211p pro... 126 2e-29
AL031766-1|CAA21136.1| 348|Drosophila melanogaster EG:84H4.3 pr... 126 2e-29
AE014298-657|AAF45970.1| 800|Drosophila melanogaster CG7035-PB,... 126 2e-29
AE014298-656|AAN09124.1| 800|Drosophila melanogaster CG7035-PA,... 126 2e-29
AJ238970-1|CAB53186.1| 800|Drosophila melanogaster cap binding ... 124 1e-28
BT022805-1|AAY55221.1| 753|Drosophila melanogaster IP13758p pro... 33 0.40
BT022776-1|AAY55192.1| 753|Drosophila melanogaster IP13958p pro... 33 0.40
AE014297-3006|AAF55893.1| 747|Drosophila melanogaster CG7907-PA... 33 0.40
AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein... 29 6.5
AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA... 29 6.5
>AY051796-1|AAK93220.1| 800|Drosophila melanogaster LD31211p
protein.
Length = 800
Score = 126 bits (305), Expect = 2e-29
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +3
Query: 252 LESLILRVGXXXXXXXXXXXXXXXXVLEADLSTFRVKILRILTDCAIRMPEKCTIYATLV 431
LESLILRVG VLEADL TFR+KILRIL+DCA+RMPEKCT+Y TLV
Sbjct: 34 LESLILRVGERSTSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVYTTLV 93
Query: 432 GLLNAKNYNFGGEFVDYIVKTFKENLK 512
GLLNAKNY FGGEFVD++VKTFKE+LK
Sbjct: 94 GLLNAKNYKFGGEFVDHMVKTFKESLK 120
Score = 60.9 bits (141), Expect = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 509 KVGKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDW 664
K+ +W+AARY LRF+ADLVNCH D +NED VP VRRDW
Sbjct: 120 KMCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDW 171
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 MNRRRGHDDE-EGYERLHRKRRRVSENQEIEDRL 255
M+RRR HD E EGY+ KRRRVSENQEIEDRL
Sbjct: 1 MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRL 34
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 667 VFAVLSALPWVGRSCMKRRIS 729
VFAVLS LPWVGR +++ S
Sbjct: 173 VFAVLSTLPWVGRDLYEKKES 193
>AL031766-1|CAA21136.1| 348|Drosophila melanogaster EG:84H4.3
protein.
Length = 348
Score = 126 bits (305), Expect = 2e-29
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +3
Query: 252 LESLILRVGXXXXXXXXXXXXXXXXVLEADLSTFRVKILRILTDCAIRMPEKCTIYATLV 431
LESLILRVG VLEADL TFR+KILRIL+DCA+RMPEKCT+Y TLV
Sbjct: 34 LESLILRVGERSTSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVYTTLV 93
Query: 432 GLLNAKNYNFGGEFVDYIVKTFKENLK 512
GLLNAKNY FGGEFVD++VKTFKE+LK
Sbjct: 94 GLLNAKNYKFGGEFVDHMVKTFKESLK 120
Score = 60.9 bits (141), Expect = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 509 KVGKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDW 664
K+ +W+AARY LRF+ADLVNCH D +NED VP VRRDW
Sbjct: 120 KMCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDW 171
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 MNRRRGHDDE-EGYERLHRKRRRVSENQEIEDRL 255
M+RRR HD E EGY+ KRRRVSENQEIEDRL
Sbjct: 1 MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRL 34
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 667 VFAVLSALPWVGRSCMKRRIS 729
VFAVLS LPWVGR +++ S
Sbjct: 173 VFAVLSTLPWVGRDLYEKKES 193
>AE014298-657|AAF45970.1| 800|Drosophila melanogaster CG7035-PB,
isoform B protein.
Length = 800
Score = 126 bits (305), Expect = 2e-29
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +3
Query: 252 LESLILRVGXXXXXXXXXXXXXXXXVLEADLSTFRVKILRILTDCAIRMPEKCTIYATLV 431
LESLILRVG VLEADL TFR+KILRIL+DCA+RMPEKCT+Y TLV
Sbjct: 34 LESLILRVGERSTSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVYTTLV 93
Query: 432 GLLNAKNYNFGGEFVDYIVKTFKENLK 512
GLLNAKNY FGGEFVD++VKTFKE+LK
Sbjct: 94 GLLNAKNYKFGGEFVDHMVKTFKESLK 120
Score = 60.9 bits (141), Expect = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 509 KVGKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDW 664
K+ +W+AARY LRF+ADLVNCH D +NED VP VRRDW
Sbjct: 120 KMCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDW 171
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 MNRRRGHDDE-EGYERLHRKRRRVSENQEIEDRL 255
M+RRR HD E EGY+ KRRRVSENQEIEDRL
Sbjct: 1 MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRL 34
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 667 VFAVLSALPWVGRSCMKRRIS 729
VFAVLS LPWVGR +++ S
Sbjct: 173 VFAVLSTLPWVGRDLYEKKES 193
>AE014298-656|AAN09124.1| 800|Drosophila melanogaster CG7035-PA,
isoform A protein.
Length = 800
Score = 126 bits (305), Expect = 2e-29
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +3
Query: 252 LESLILRVGXXXXXXXXXXXXXXXXVLEADLSTFRVKILRILTDCAIRMPEKCTIYATLV 431
LESLILRVG VLEADL TFR+KILRIL+DCA+RMPEKCT+Y TLV
Sbjct: 34 LESLILRVGERSTSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVYTTLV 93
Query: 432 GLLNAKNYNFGGEFVDYIVKTFKENLK 512
GLLNAKNY FGGEFVD++VKTFKE+LK
Sbjct: 94 GLLNAKNYKFGGEFVDHMVKTFKESLK 120
Score = 60.9 bits (141), Expect = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 509 KVGKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDW 664
K+ +W+AARY LRF+ADLVNCH D +NED VP VRRDW
Sbjct: 120 KMCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDW 171
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 MNRRRGHDDE-EGYERLHRKRRRVSENQEIEDRL 255
M+RRR HD E EGY+ KRRRVSENQEIEDRL
Sbjct: 1 MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRL 34
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 667 VFAVLSALPWVGRSCMKRRIS 729
VFAVLS LPWVGR +++ S
Sbjct: 173 VFAVLSTLPWVGRDLYEKKES 193
>AJ238970-1|CAB53186.1| 800|Drosophila melanogaster cap binding
protein 80 protein.
Length = 800
Score = 124 bits (299), Expect = 1e-28
Identities = 60/87 (68%), Positives = 67/87 (77%)
Frame = +3
Query: 252 LESLILRVGXXXXXXXXXXXXXXXXVLEADLSTFRVKILRILTDCAIRMPEKCTIYATLV 431
LESLILRVG VLEADL TFR+KILRIL+DCA+ MPEKCT+Y TLV
Sbjct: 34 LESLILRVGEATTSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVAMPEKCTVYTTLV 93
Query: 432 GLLNAKNYNFGGEFVDYIVKTFKENLK 512
GLLNAKNY FGGEFVD++VKTFKE+LK
Sbjct: 94 GLLNAKNYKFGGEFVDHMVKTFKESLK 120
Score = 60.9 bits (141), Expect = 2e-09
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = +2
Query: 509 KVGKWNAARYCLRFIADLVNCHXXXXXXXXXXXXXXXDSANEDGVPHVRRDW 664
K+ +W+AARY LRF+ADLVNCH D +NED VP VRRDW
Sbjct: 120 KMCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSNEDTVPQVRRDW 171
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/34 (73%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 MNRRRGHDDE-EGYERLHRKRRRVSENQEIEDRL 255
M+RRR HD E EGY+ KRRRVSENQEIEDRL
Sbjct: 1 MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRL 34
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 667 VFAVLSALPWVGRSCMKRRIS 729
VFAVLS LPWVGR +++ S
Sbjct: 173 VFAVLSTLPWVGRDLYEKKES 193
>BT022805-1|AAY55221.1| 753|Drosophila melanogaster IP13758p
protein.
Length = 753
Score = 33.1 bits (72), Expect = 0.40
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 363 ILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENL 509
++ L C P + + YATLVGL+N ++ FG E + ++ E++
Sbjct: 68 LINELVICLGYYPGQASAYATLVGLINVADFEFGSECLLFMAHKVGESV 116
>BT022776-1|AAY55192.1| 753|Drosophila melanogaster IP13958p
protein.
Length = 753
Score = 33.1 bits (72), Expect = 0.40
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 363 ILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENL 509
++ L C P + + YATLVGL+N ++ FG E + ++ E++
Sbjct: 68 LINELVICLGYYPGQASAYATLVGLINVADFEFGSECLLFMAHKVGESV 116
>AE014297-3006|AAF55893.1| 747|Drosophila melanogaster CG7907-PA
protein.
Length = 747
Score = 33.1 bits (72), Expect = 0.40
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 363 ILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENL 509
++ L C P + + YATLVGL+N ++ FG E + ++ E++
Sbjct: 68 LINELVICLGYYPGQASAYATLVGLINVADFEFGSECLLFMAHKVGESV 116
>AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein
protein.
Length = 2162
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 363 ILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKSGNGMLLGI 539
+L + C + E+C+ L+G +N K+Y + ++IVK +K + + M++ +
Sbjct: 178 MLTLYKQCPPPVLEECSKTLGLIGFINRKSYPI---YEEFIVKNYKSSKRMQKYMIMAL 233
>AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA
protein.
Length = 3218
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 363 ILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKSGNGMLLGI 539
+L + C + E+C+ L+G +N K+Y + ++IVK +K + + M++ +
Sbjct: 178 MLTLYKQCPPPVLEECSKTLGLIGFINRKSYPI---YEEFIVKNYKSSKRMQKYMIMAL 233
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,364,847
Number of Sequences: 53049
Number of extensions: 595596
Number of successful extensions: 1729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1724
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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