Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20216
(733 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.7
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 24 1.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 9.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 225 YTTPFPMEAFISFFIIMSSTTVHNKITVRITNL*LFSLC 109
Y FP E I+F+II+ T+ + + + + + LC
Sbjct: 213 YKGDFPTETDITFYIIIRRKTLFYTVNLILPTVLISFLC 251
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +3
Query: 399 PEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTF 497
P ++ +L LN KN+N + Y+++ F
Sbjct: 278 PSDYFLFRSLQNSLNGKNFNNDDDIKSYLIQFF 310
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 160 NRRRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
+R R + + YE+LH ++ ++ E + R S
Sbjct: 7 DRNREYRKDRRYEKLHNEKEKLLEERTNRKRNS 39
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 160 NRRRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
+R R + + YE+LH ++ ++ E + R S
Sbjct: 7 DRNREYRKDRRYEKLHNEKEKLLEERTNRKRNS 39
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 382 IVLSACPRNVQSMQL 426
+VLS CP N+ +Q+
Sbjct: 852 LVLSGCPSNMMELQV 866
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 336 LPVHLLILLGYSPNWNYFFRQLLKLRTQAILDFLVF 229
+PVH + + + NY R+ L L Q L+ F
Sbjct: 160 IPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPF 195
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 336 LPVHLLILLGYSPNWNYFFRQLLKLRTQAILDFLVF 229
+PVH + + + NY R+ L L Q L+ F
Sbjct: 160 IPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPF 195
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 336 LPVHLLILLGYSPNWNYFFRQLLKLRTQAILDFLVF 229
+PVH + + + NY R+ L L Q L+ F
Sbjct: 211 IPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPF 246
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 336 LPVHLLILLGYSPNWNYFFRQLLKLRTQAILDFLVF 229
+PVH + + + NY R+ L L Q L+ F
Sbjct: 160 IPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPF 195
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + YE+LH ++ ++ E + +R S
Sbjct: 10 REYREKNRRYEKLHNEKEKLLEERTSRNRYS 40
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + + YE+LH ++ ++ E + R S
Sbjct: 10 REYREKDRRYEKLHNEKEKLLEERTSRKRYS 40
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + + YE+LH ++ ++ E + R S
Sbjct: 10 REYREKDRRYEKLHNEKEKLLEERTSRKRYS 40
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + + YE+LH ++ ++ E + R S
Sbjct: 10 REYREKDRRYEKLHNEKEKLLEERTSRKRYS 40
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + + YE+LH ++ ++ E + R S
Sbjct: 10 REYREKDRRYEKLHNEKEKLLEERTSRKRYS 40
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +1
Query: 193 YERLHRKRRRVSENQEIEDRLS 258
YE+LH ++ ++ E + +R S
Sbjct: 252 YEKLHNEKEKLLEERTSRERYS 273
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = +1
Query: 166 RRGHDDEEGYERLHRKRRRVSENQEIEDRLS 258
R + + YE+LH ++ ++ E + R S
Sbjct: 243 REYREKDRRYEKLHNEKEKLLEERTSRKRYS 273
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,906
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 54
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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