Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20212
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 25 0.69
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 25 0.69
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.4
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 6.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 6.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.4
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 8.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 8.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 8.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 8.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.5
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.69
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 145 FLRRAEHCMGKVAEAPESPVSKCVSSMSPIVV 50
+LRR C + EAP PV + + S++P+V+
Sbjct: 47 YLRRQLKCA--LGEAPCDPVGRRLKSLAPLVL 76
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.69
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 145 FLRRAEHCMGKVAEAPESPVSKCVSSMSPIVV 50
+LRR C + EAP PV + + S++P+V+
Sbjct: 47 YLRRQLKCA--LGEAPCDPVGRRLKSLAPLVL 76
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 551 YRVQTFNFYNHNSYLNVN 604
Y+ +N YN+N+Y N N
Sbjct: 89 YKYSNYNNYNNNNYNNNN 106
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSY 592
+ LS N S Y N YN+N+Y
Sbjct: 83 SSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 551 YRVQTFNFYNHNSYLNVN 604
Y+ +N YN+N+Y N N
Sbjct: 89 YKYSNYNNYNNNNYNNNN 106
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSY 592
+ LS N S Y N YN+N+Y
Sbjct: 83 SSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 551 YRVQTFNFYNHNSYLNVN 604
Y+ +N YN+N+Y N N
Sbjct: 89 YKYSNYNNYNNNNYNNNN 106
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSY 592
+ LS N S Y N YN+N+Y
Sbjct: 83 SSLSNNYKYSNYNNYNNNNYNNNNY 107
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 551 YRVQTFNFYNHNSYLNVN 604
Y+ +N YN+N+Y N N
Sbjct: 89 YKYSNYNNYNNNNYNNNN 106
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSY 592
+ LS N S Y N YN+N+Y
Sbjct: 83 SSLSNNYKYSNYNNYNNNNYNNNNY 107
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSYLNVN 604
+ LS N S Y +N YN+N+Y N N
Sbjct: 316 SSLSNNYKYSNYN--NYNNYNNNNYNNYN 342
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 509 SKQTQLSTNKPLSIYRVQTFNFYNHNSYLNVNI 607
S ++ S+N P + Y+ Q N Y + +L ++
Sbjct: 101 SNRSSTSSNDPKNQYKNQNNNHYTSHQHLRTHL 133
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 569 NFYNHNSYLNVNIILCINLT*KRYIQRWCSRPRSP 673
N YN Y N+N I I + Y + RP P
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGP 136
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 569 NFYNHNSYLNVNIILCINLT*KRYIQRWCSRPRSP 673
N YN Y N+N I I + Y + RP P
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGP 136
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 569 NFYNHNSYLNVNIILCINLT*KRYIQRWCSRPRSP 673
N YN Y N+N I I + Y + RP P
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGP 136
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 569 NFYNHNSYLNVNIILCINLT*KRYIQRWCSRPRSP 673
N YN Y N+N I I + Y + RP P
Sbjct: 102 NNYNKKLYYNINYIEQIPIPVPVYYGNFLPRPMGP 136
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 211 FPVLDVDISTILHGR 167
FPVL V I+ +LHG+
Sbjct: 8 FPVLFVIINVLLHGQ 22
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 64 TSKTHTLRPETPGPQ 108
T H PETPGPQ
Sbjct: 462 TPHHHPHPPETPGPQ 476
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 344 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 378
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSYLNVNII 610
+ LS N +I N YN Y N+N I
Sbjct: 83 SSLSNNYISNISNYNNNNNYNKKLYYNINYI 113
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSYLNVNII 610
+ LS N +I N YN Y N+N I
Sbjct: 83 SSLSNNYISNISNYNNDNNYNKKLYYNINYI 113
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 412 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 446
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -1
Query: 462 NSLPLSKSVR--NCVPRSPSGILRSSRRSPLSAIR 364
N L + +R N PSG +RS+ +P+S R
Sbjct: 412 NVLDIDDDIRHKNSAANPPSGYIRSAFGTPISTGR 446
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 518 TQLSTNKPLSIYRVQTFNFYNHNSYLNVNII 610
+ LS N +I N YN Y N+N I
Sbjct: 321 SSLSNNYISNISNYNNNNNYNKKLYYNINYI 351
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 644 QRWCSRPRSP 673
+RW SRPR P
Sbjct: 43 KRWWSRPREP 52
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +1
Query: 190 CPHPKPESTATLKFTWLGLISS 255
CP P TWLG ++S
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNS 374
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +1
Query: 190 CPHPKPESTATLKFTWLGLISS 255
CP P TWLG ++S
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNS 374
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +1
Query: 190 CPHPKPESTATLKFTWLGLISS 255
CP P TWLG ++S
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNS 374
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 641 IQRWCSRPRSPPLADV 688
+ +WC PR PL V
Sbjct: 484 LPQWCLPPREAPLVGV 499
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,851
Number of Sequences: 438
Number of extensions: 4899
Number of successful extensions: 39
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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