Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20209
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    62   4e-12
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    62   4e-12
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    58   9e-11
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    27   0.15 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 62.1 bits (144), Expect = 4e-12
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +1

Query: 583 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGT
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGT 32


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 62.1 bits (144), Expect = 4e-12
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +1

Query: 583 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGT
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGT 32


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 57.6 bits (133), Expect = 9e-11
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +1

Query: 583 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGT
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDLGGGT 31


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 176 DHSVLCCVHRHRASHRRCRQEPGGDEPNNTIFDAKRLI--GRKFEDATVQADMKHWPFEV 349
           DH  +  +H +  SH   +QEP G   +N  F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 350 VS 355
           +S
Sbjct: 399 LS 400


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +2

Query: 356 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 481
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 128 LPAREGGDHRQRPGQQDH 181
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 538 TKDAGTISGLNVLRIINEPTAA 603
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 690 WTRRSTAAEVKDKYIS 643
           WT   T A+V +KY+S
Sbjct: 437 WTSHLTQADVIEKYLS 452


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 433 GAYENEGNCRSLSRQNCAECSYHGSPYFNDSQRQATKDAGTI 558
           G Y    + +  S  + A  + +G P+    ++QA    GT+
Sbjct: 487 GLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTL 528


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,194
Number of Sequences: 336
Number of extensions: 4389
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)