Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20209
(721 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 137 1e-32
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 115 3e-26
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 69 4e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 3e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.94
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 30 1.6
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 2.2
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.9
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 28 6.6
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 6.6
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.8
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 8.8
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 137 bits (331), Expect = 1e-32
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +2
Query: 254 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 433
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 434 VLTKMKETAEAYLGKTVQNAVITVP 508
VL KMKETAEAYLG+ V +AVITVP
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVP 147
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 69 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 248
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 249 MNP 257
+NP
Sbjct: 61 LNP 63
Score = 107 bits (256), Expect = 1e-23
Identities = 49/56 (87%), Positives = 54/56 (96%)
Frame = +1
Query: 511 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
YFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGT
Sbjct: 149 YFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGT 204
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 136 bits (328), Expect = 2e-32
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +2
Query: 254 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 433
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 434 VLTKMKETAEAYLGKTVQNAVITVP 508
VLTKMKETAEAYLG V +AV+TVP
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 132 bits (318), Expect = 4e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 69 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 248
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 249 MNP 257
MNP
Sbjct: 61 MNP 63
Score = 103 bits (248), Expect = 1e-22
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 511 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
YF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGT
Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGT 204
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 69 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 248
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 249 MNPT 260
MNPT
Sbjct: 61 MNPT 64
Score = 113 bits (271), Expect = 2e-25
Identities = 63/110 (57%), Positives = 72/110 (65%), Gaps = 25/110 (22%)
Frame = +2
Query: 254 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 424
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 425 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVP 508
SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 106 bits (255), Expect = 2e-23
Identities = 52/56 (92%), Positives = 52/56 (92%)
Frame = +1
Query: 511 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
YFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGT
Sbjct: 242 YFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGT 297
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 419 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 508
++SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 511 YFNDSQRQATKDAG 552
YFNDSQRQATKDAG
Sbjct: 174 YFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 115 bits (277), Expect = 3e-26
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +2
Query: 254 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 433
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 434 VLTKMKETAEAYLGKTVQNAVITVP 508
VLTKMKETAEAYLGK V +AV+TVP
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVP 845
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +3
Query: 87 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 257
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 98.7 bits (235), Expect = 4e-21
Identities = 45/56 (80%), Positives = 52/56 (92%)
Frame = +1
Query: 511 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
YFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGT
Sbjct: 847 YFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGT 901
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 436
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 437 LTKMKETAEAYLGKTVQNAVITVP 508
T++K TAE L V + VI+VP
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVP 204
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 87 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 242
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 487 ECSYHGSPYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 657
+C Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 658 FDLG 669
D+G
Sbjct: 258 VDIG 261
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 68.9 bits (161), Expect = 4e-12
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +1
Query: 514 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGT 678
F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT
Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGT 233
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +3
Query: 75 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 248
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 249 MNP 257
+NP
Sbjct: 90 INP 92
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 430
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 431 MVLTKMKETAEAYLGKTVQNAVITVP 508
V+ K++ AE L TV AV++VP
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVP 177
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 26/72 (36%)
Frame = +1
Query: 511 YFNDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYG 618
+FND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYG
Sbjct: 48 HFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYG 107
Query: 619 LDKK--GTGERN 648
LDK G ERN
Sbjct: 108 LDKARGGKAERN 119
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +2
Query: 374 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +1
Query: 508 PYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGG 675
P+FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G
Sbjct: 114 PFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGAS 173
Query: 676 TS 681
++
Sbjct: 174 ST 175
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 368 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 508
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 138 GKVEIIANDQGNRTTPSYVAFTDTERLI 221
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 147 EIIANDQGNRTTPSYVAFT-DTERL 218
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 550 LHLLWLVFESH*STGNRDNCILHSFAEIS 464
++ LWL F + S+ + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 365 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQK 544
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 545 MQ 550
Q
Sbjct: 714 SQ 715
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 56 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 232
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 233 QEPGGDEPNNTIFDA 277
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 255 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 157
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 15 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 101
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 462 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 283
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 282 RLASNIVL 259
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 468 ISAKLCRM-QLSRFP-VLQ*LSKTSHKRCRYHLRLERSPNH 584
+SAKLC + LS+ LQ S ++C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 412 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSPYFN 519
PRG Q Y G+C S+S++NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +3
Query: 468 ISAKLCRM-QLSRFP-VLQ*LSKTSHKRCRYHLRLERSPNH 584
+SAKLC + LS+ LQ S ++C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 97 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 240
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 97 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 240
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 27.9 bits (59), Expect = 8.8
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Frame = +3
Query: 387 IRVKTKPFSPRKSVPWCLRK*RKLPKLISAKLCRMQLSRFPVLQ*LSKTSHKRCRYHLRL 566
+ +K FS + C K L +++ L Q + + L H R R R
Sbjct: 676 VHLKVCHFSSQVVDTACQHKWSNLKEVLVPSLPERQTGKRKLTNKLLMNLHVRLRRWRRE 735
Query: 567 ERSPNHQ*THCCCDCLRS*QKGYWRTKCTYL*PRRRYF-DVSILTSRMVSSR 719
R+PNH S +G W++ R+R+F + LT R ++SR
Sbjct: 736 SRAPNHP-RPDLNTLEESKPEGAWQSATALTERRQRHFVSCNTLTRRSLASR 786
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +3
Query: 108 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 287
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 288 SDVSSKMLLCKP 323
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,601,194
Number of Sequences: 59808
Number of extensions: 605160
Number of successful extensions: 1811
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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