BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20205 (743 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 74 9e-14 U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 1e-10 L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 1e-10 AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 1e-10 U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 5e-09 U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 5e-09 AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 5e-09 U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 55 6e-08 AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 49 3e-06 AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 49 3e-06 Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04 Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04 U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04 U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04 AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04 AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04 Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.003 U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 39 0.003 L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 39 0.003 L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 39 0.003 AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010 AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010 AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013 L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.12 L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.12 AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 32 0.37 U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 32 0.49 AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.49 AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.49 U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.86 Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 30 1.5 Z48543-2|CAA88433.2| 478|Caenorhabditis elegans Hypothetical pr... 30 1.5 Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 30 2.0 U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 2.0 U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 2.0 U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 2.0 AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 2.0 Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.6 AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.6 U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 4.6 AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 4.6 Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.1 Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.1 AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 28 6.1 AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 6.1 Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 28 8.0 Z50176-3|CAA90540.1| 196|Caenorhabditis elegans Hypothetical pr... 28 8.0 >AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical protein K08D12.3a protein. Length = 151 Score = 74.1 bits (174), Expect = 9e-14 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 18/83 (21%) Frame = +3 Query: 264 SCYNCNKTGHIARNCP----EGGRESAT--QTCYNCNKSGHISRNCPDGTK--------- 398 +CY C + GHI+RNCP +GGR TCYNC ++GH SR+CP G Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGG 64 Query: 399 ---TCYVCGKPGHISRECDEARN 458 +CY CG GH SR+C AR+ Sbjct: 65 GGGSCYNCGGRGHYSRDCPSARS 87 Score = 70.1 bits (164), Expect = 2e-12 Identities = 37/84 (44%), Positives = 43/84 (51%), Gaps = 19/84 (22%) Frame = +3 Query: 264 SCYNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPDG-- 392 SCYNC GH +R+CP EGG R Q CYNC +SGHISR C + Sbjct: 68 SCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGS 127 Query: 393 --TKTCYVCGKPGHISRECDEARN 458 K CY C + GHISR+C N Sbjct: 128 AEEKRCYQCQETGHISRDCPSQTN 151 Score = 66.1 bits (154), Expect = 2e-11 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 12/78 (15%) Frame = +1 Query: 46 CYKCNRTGHFARECTQ-------GGVVSRDS-GFNRQREKCFKCNRTGHFARDCKE---- 189 CY C GH++R+C GG R G + +KC+ C R+GH +R+C E Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSA 128 Query: 190 EADRCYRCNGTGHIAREC 243 E RCY+C TGHI+R+C Sbjct: 129 EEKRCYQCQETGHISRDC 146 Score = 62.5 bits (145), Expect = 3e-10 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 20/91 (21%) Frame = +1 Query: 40 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE--------- 192 S CY C TGHF+R+C +GG G C+ C GH++RDC Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGY 94 Query: 193 -----------ADRCYRCNGTGHIARECAQS 252 +CY C +GHI+REC +S Sbjct: 95 GGRGGEGRSFGGQKCYNCGRSGHISRECTES 125 Score = 58.8 bits (136), Expect = 4e-09 Identities = 29/83 (34%), Positives = 36/83 (43%), Gaps = 12/83 (14%) Frame = +1 Query: 31 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD---- 198 MS CYKC + GH +R C G G C+ C TGHF+RDC + Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59 Query: 199 --------RCYRCNGTGHIAREC 243 CY C G GH +R+C Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDC 82 Score = 53.2 bits (122), Expect = 2e-07 Identities = 19/51 (37%), Positives = 31/51 (60%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD 198 CY C R+GH +RECT+ G + + ++C++C TGH +RDC + + Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151 Score = 48.0 bits (109), Expect = 7e-06 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 11/47 (23%) Frame = +3 Query: 336 QTCYNCNKSGHISRNCPDGT-----------KTCYVCGKPGHISREC 443 + CY C + GHISRNCP+G TCY C + GH SR+C Sbjct: 4 RNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDC 50 Score = 35.5 bits (78), Expect = 0.040 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%) Frame = +3 Query: 228 HSARVRTEP---DEPSCYNCNKTGHIARNCP 311 H +R TE +E CY C +TGHI+R+CP Sbjct: 117 HISRECTESGSAEEKRCYQCQETGHISRDCP 147 >U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 55.2 bits (127), Expect = 5e-08 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR C + K Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203 Score = 52.8 bits (121), Expect(2) = 1e-10 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = +3 Query: 315 GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 443 GG E C+NC GH S CP+ + C+ CG+ GH S EC Sbjct: 235 GGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277 Score = 51.6 bits (118), Expect = 6e-07 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%) Frame = +3 Query: 315 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 GG E C+NC + GH S +CP+ K CY C +PGH SREC E R Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202 Score = 46.4 bits (105), Expect = 2e-05 Identities = 30/94 (31%), Positives = 37/94 (39%), Gaps = 27/94 (28%) Frame = +1 Query: 43 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 141 VCY C + GH +RECT+ GG D GF E K Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243 Query: 142 CFKCNRTGHFARDCKEEADRCYRCNGTGHIAREC 243 CF C GH + +C E C+ C GH + EC Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 C+NC GH + CPE R C+NC + GH S CP+ K Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282 Score = 42.7 bits (96), Expect = 3e-04 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +1 Query: 118 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 G + CF C + GH + DC KE R CY C GH +REC + Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 35.1 bits (77), Expect = 0.053 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +R+C EE Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEE 201 Score = 31.1 bits (67), Expect(2) = 1e-10 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE 314 R E + CYNC + GH +R C E Sbjct: 177 RKEREPRVCYNCQQPGHTSRECTE 200 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 Query: 402 CYVCGKPGHISRECDEARN*PQP 470 C+ C +PGH S +C E R +P Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182 >L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 55.2 bits (127), Expect = 5e-08 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR C + K Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203 Score = 52.8 bits (121), Expect(2) = 1e-10 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = +3 Query: 315 GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 443 GG E C+NC GH S CP+ + C+ CG+ GH S EC Sbjct: 235 GGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277 Score = 51.6 bits (118), Expect = 6e-07 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%) Frame = +3 Query: 315 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 GG E C+NC + GH S +CP+ K CY C +PGH SREC E R Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202 Score = 46.4 bits (105), Expect = 2e-05 Identities = 30/94 (31%), Positives = 37/94 (39%), Gaps = 27/94 (28%) Frame = +1 Query: 43 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 141 VCY C + GH +RECT+ GG D GF E K Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243 Query: 142 CFKCNRTGHFARDCKEEADRCYRCNGTGHIAREC 243 CF C GH + +C E C+ C GH + EC Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 C+NC GH + CPE R C+NC + GH S CP+ K Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282 Score = 42.7 bits (96), Expect = 3e-04 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +1 Query: 118 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 G + CF C + GH + DC KE R CY C GH +REC + Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 35.1 bits (77), Expect = 0.053 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +R+C EE Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEE 201 Score = 31.1 bits (67), Expect(2) = 1e-10 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE 314 R E + CYNC + GH +R C E Sbjct: 177 RKEREPRVCYNCQQPGHTSRECTE 200 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 Query: 402 CYVCGKPGHISRECDEARN*PQP 470 C+ C +PGH S +C E R +P Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182 >AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase protein 1 protein. Length = 763 Score = 55.2 bits (127), Expect = 5e-08 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR C + K Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERK 203 Score = 52.8 bits (121), Expect(2) = 1e-10 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = +3 Query: 315 GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 443 GG E C+NC GH S CP+ + C+ CG+ GH S EC Sbjct: 235 GGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277 Score = 51.6 bits (118), Expect = 6e-07 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%) Frame = +3 Query: 315 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 GG E C+NC + GH S +CP+ K CY C +PGH SREC E R Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202 Score = 46.4 bits (105), Expect = 2e-05 Identities = 30/94 (31%), Positives = 37/94 (39%), Gaps = 27/94 (28%) Frame = +1 Query: 43 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 141 VCY C + GH +RECT+ GG D GF E K Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243 Query: 142 CFKCNRTGHFARDCKEEADRCYRCNGTGHIAREC 243 CF C GH + +C E C+ C GH + EC Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 C+NC GH + CPE R C+NC + GH S CP+ K Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282 Score = 42.7 bits (96), Expect = 3e-04 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +1 Query: 118 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 G + CF C + GH + DC KE R CY C GH +REC + Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200 Score = 35.1 bits (77), Expect = 0.053 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +R+C EE Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEE 201 Score = 31.1 bits (67), Expect(2) = 1e-10 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE 314 R E + CYNC + GH +R C E Sbjct: 177 RKEREPRVCYNCQQPGHTSRECTE 200 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 Query: 402 CYVCGKPGHISRECDEARN*PQP 470 C+ C +PGH S +C E R +P Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182 >U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. Length = 974 Score = 58.4 bits (135), Expect = 5e-09 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302 Score = 58.4 bits (135), Expect = 5e-09 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416 Score = 49.6 bits (113), Expect = 2e-06 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Frame = +3 Query: 321 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 R C+NC + GH S +CP+ K CY C +PGH SR+C E R Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301 Score = 49.6 bits (113), Expect = 2e-06 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Frame = +3 Query: 321 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 R C+NC + GH S +CP+ K CY C +PGH SR+C E R Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415 Score = 48.0 bits (109), Expect = 7e-06 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 324 ESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 443 E C+NC GH S CP+ + C+ CG+ GH S EC Sbjct: 449 ERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488 Score = 44.8 bits (101), Expect = 7e-05 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 25/92 (27%) Frame = +1 Query: 43 VCYKCNRTGHFAREC-------------TQGGVVSRDSGF----------NRQRE--KCF 147 VCY C + GH +R+C T G D GF N +R KCF Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456 Query: 148 KCNRTGHFARDCKEEADRCYRCNGTGHIAREC 243 C GH + +C E C+ C GH + EC Sbjct: 457 NCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 C+NC GH + CPE R C+NC + GH S CP+ K Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +1 Query: 130 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 + CF C + GH + DC KE R CY C GH +R+C + Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +1 Query: 130 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 + CF C + GH + DC KE R CY C GH +R+C + Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 39.5 bits (88), Expect = 0.002 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE-----GGRESATQTCYNCNKSGH-------ISRNCP 386 + E + CYNC + GH +R+CPE GR T N G N Sbjct: 390 KKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEE 449 Query: 387 DGTKTCYVCGKPGHISRECDE 449 G C+ C GH S EC E Sbjct: 450 RGPMKCFNCKGEGHRSAECPE 470 Score = 36.7 bits (81), Expect = 0.017 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +RDC EE Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300 Score = 36.7 bits (81), Expect = 0.017 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +RDC EE Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 414 Score = 33.1 bits (72), Expect = 0.21 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 365 + E + CYNC + GH +R+CPE + + + SG Sbjct: 276 KKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 360 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 470 SG ++ + C+ C +PGH S +C E + +P Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 360 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 470 SG ++ + C+ C +PGH S +C E + +P Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395 >U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2 protein. Length = 974 Score = 58.4 bits (135), Expect = 5e-09 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302 Score = 58.4 bits (135), Expect = 5e-09 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416 Score = 49.6 bits (113), Expect = 2e-06 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Frame = +3 Query: 321 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 R C+NC + GH S +CP+ K CY C +PGH SR+C E R Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301 Score = 49.6 bits (113), Expect = 2e-06 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Frame = +3 Query: 321 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 R C+NC + GH S +CP+ K CY C +PGH SR+C E R Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415 Score = 48.0 bits (109), Expect = 7e-06 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 324 ESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 443 E C+NC GH S CP+ + C+ CG+ GH S EC Sbjct: 449 ERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488 Score = 44.8 bits (101), Expect = 7e-05 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 25/92 (27%) Frame = +1 Query: 43 VCYKCNRTGHFAREC-------------TQGGVVSRDSGF----------NRQRE--KCF 147 VCY C + GH +R+C T G D GF N +R KCF Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456 Query: 148 KCNRTGHFARDCKEEADRCYRCNGTGHIAREC 243 C GH + +C E C+ C GH + EC Sbjct: 457 NCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 C+NC GH + CPE R C+NC + GH S CP+ K Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +1 Query: 130 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 + CF C + GH + DC KE R CY C GH +R+C + Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +1 Query: 130 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 + CF C + GH + DC KE R CY C GH +R+C + Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 39.5 bits (88), Expect = 0.002 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE-----GGRESATQTCYNCNKSGH-------ISRNCP 386 + E + CYNC + GH +R+CPE GR T N G N Sbjct: 390 KKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEE 449 Query: 387 DGTKTCYVCGKPGHISRECDE 449 G C+ C GH S EC E Sbjct: 450 RGPMKCFNCKGEGHRSAECPE 470 Score = 36.7 bits (81), Expect = 0.017 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +RDC EE Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300 Score = 36.7 bits (81), Expect = 0.017 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +RDC EE Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 414 Score = 33.1 bits (72), Expect = 0.21 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 365 + E + CYNC + GH +R+CPE + + + SG Sbjct: 276 KKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 360 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 470 SG ++ + C+ C +PGH S +C E + +P Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 360 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 470 SG ++ + C+ C +PGH S +C E + +P Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395 >AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line helicase protein 2 protein. Length = 974 Score = 58.4 bits (135), Expect = 5e-09 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302 Score = 58.4 bits (135), Expect = 5e-09 Identities = 20/45 (44%), Positives = 30/45 (66%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 416 Score = 49.6 bits (113), Expect = 2e-06 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Frame = +3 Query: 321 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 R C+NC + GH S +CP+ K CY C +PGH SR+C E R Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301 Score = 49.6 bits (113), Expect = 2e-06 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Frame = +3 Query: 321 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 455 R C+NC + GH S +CP+ K CY C +PGH SR+C E R Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415 Score = 48.0 bits (109), Expect = 7e-06 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 Query: 324 ESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 443 E C+NC GH S CP+ + C+ CG+ GH S EC Sbjct: 449 ERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488 Score = 44.8 bits (101), Expect = 7e-05 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 25/92 (27%) Frame = +1 Query: 43 VCYKCNRTGHFAREC-------------TQGGVVSRDSGF----------NRQRE--KCF 147 VCY C + GH +R+C T G D GF N +R KCF Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456 Query: 148 KCNRTGHFARDCKEEADRCYRCNGTGHIAREC 243 C GH + +C E C+ C GH + EC Sbjct: 457 NCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 C+NC GH + CPE R C+NC + GH S CP+ K Sbjct: 455 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +1 Query: 130 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 + CF C + GH + DC KE R CY C GH +R+C + Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +1 Query: 130 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 249 + CF C + GH + DC KE R CY C GH +R+C + Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413 Score = 39.5 bits (88), Expect = 0.002 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE-----GGRESATQTCYNCNKSGH-------ISRNCP 386 + E + CYNC + GH +R+CPE GR T N G N Sbjct: 390 KKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEE 449 Query: 387 DGTKTCYVCGKPGHISRECDE 449 G C+ C GH S EC E Sbjct: 450 RGPMKCFNCKGEGHRSAECPE 470 Score = 36.7 bits (81), Expect = 0.017 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +RDC EE Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300 Score = 36.7 bits (81), Expect = 0.017 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 C+ C + GH + +C + R+ C+ C + GH +RDC EE Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 414 Score = 33.1 bits (72), Expect = 0.21 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 365 + E + CYNC + GH +R+CPE + + + SG Sbjct: 276 KKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 360 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 470 SG ++ + C+ C +PGH S +C E + +P Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281 Score = 27.9 bits (59), Expect = 8.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +3 Query: 360 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 470 SG ++ + C+ C +PGH S +C E + +P Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 395 >U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical protein F07E5.5 protein. Length = 384 Score = 54.8 bits (126), Expect = 6e-08 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 425 +C++C + GH +CP+ S+ C+ C H C G K TC+VC + G Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289 Query: 426 HISRECDEARN 458 HISR+C + N Sbjct: 290 HISRDCHQNVN 300 Score = 47.6 bits (108), Expect = 9e-06 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 9/70 (12%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCYVCGK 419 C+ C H C + G + TC+ C + GHISR+C PDG C VCG Sbjct: 256 CFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCGA 314 Query: 420 PGHISRECDE 449 H+ R+C E Sbjct: 315 NTHLRRDCPE 324 Score = 47.2 bits (107), Expect = 1e-05 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 7/79 (8%) Frame = +1 Query: 34 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYR- 210 S VC+KC H EC + GV GF CF C + GH +RDC + + Y Sbjct: 252 SDGVCFKCGSMEHSIHECKKKGV----KGF--PYATCFVCKQVGHISRDCHQNVNGVYPD 305 Query: 211 ---CNGTG---HIARECAQ 249 CN G H+ R+C + Sbjct: 306 GGCCNVCGANTHLRRDCPE 324 Score = 46.0 bits (104), Expect = 3e-05 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Frame = +1 Query: 31 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR--- 201 ++ S C+ C GH +C + S D CFKC H +CK++ + Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278 Query: 202 ---CYRCNGTGHIARECAQS 252 C+ C GHI+R+C Q+ Sbjct: 279 YATCFVCKQVGHISRDCHQN 298 >AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA helicase-4 protein. Length = 1156 Score = 49.2 bits (112), Expect = 3e-06 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD---GTKTCYVCGKPGHISR 437 C+NC + GHI++ C + + C NC + GH + +C C CG GH + Sbjct: 572 CHNCGEEGHISKECDK--PKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAV 629 Query: 438 ECDEARN*PQPPC 476 +CD+ + P+ PC Sbjct: 630 DCDQPKV-PRGPC 641 Score = 47.2 bits (107), Expect = 1e-05 Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 207 C C GHFA +C Q V R C C + GHFA+DC+ E R C Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668 Query: 208 RCNGTGHIARECAQSP 255 RC GH EC P Sbjct: 669 RCAEEGHWGYECPTRP 684 Score = 46.8 bits (106), Expect = 2e-05 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Frame = +3 Query: 228 HSARVRTEPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTKT 401 H ++ +P P C NC + GH A +C + C NC GH + +C D K Sbjct: 580 HISKECDKPKVPRFPCRNCEQLGHFASDCDQP--RVPRGPCRNCGIEGHFAVDC-DQPKV 636 Query: 402 ----CYVCGKPGHISREC--DEARN*PQPPC 476 C CG+ GH +++C + R P PC Sbjct: 637 PRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667 Score = 43.2 bits (97), Expect = 2e-04 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 216 C+ C GH ++EC + V R C C + GHFA DC + C C Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622 Query: 217 GTGHIARECAQ 249 GH A +C Q Sbjct: 623 IEGHFAVDCDQ 633 Score = 41.1 bits (92), Expect = 8e-04 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGH 428 C NC GH A +C + + C NC + GH +++C + T+ C C + GH Sbjct: 618 CRNCGIEGHFAVDCDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGH 675 Query: 429 ISREC 443 EC Sbjct: 676 WGYEC 680 Score = 39.9 bits (89), Expect = 0.002 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 267 CYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCPDGTK 398 C NC + GH A++C E R T+ C C + GH CP K Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPK 685 Score = 35.5 bits (78), Expect = 0.040 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 Query: 402 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 494 C+ CG+ GHIS+ECD+ + P+ PC QL Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601 >AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase protein 4 protein. Length = 1156 Score = 49.2 bits (112), Expect = 3e-06 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD---GTKTCYVCGKPGHISR 437 C+NC + GHI++ C + + C NC + GH + +C C CG GH + Sbjct: 572 CHNCGEEGHISKECDK--PKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAV 629 Query: 438 ECDEARN*PQPPC 476 +CD+ + P+ PC Sbjct: 630 DCDQPKV-PRGPC 641 Score = 47.2 bits (107), Expect = 1e-05 Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 6/76 (7%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 207 C C GHFA +C Q V R C C + GHFA+DC+ E R C Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668 Query: 208 RCNGTGHIARECAQSP 255 RC GH EC P Sbjct: 669 RCAEEGHWGYECPTRP 684 Score = 46.8 bits (106), Expect = 2e-05 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Frame = +3 Query: 228 HSARVRTEPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTKT 401 H ++ +P P C NC + GH A +C + C NC GH + +C D K Sbjct: 580 HISKECDKPKVPRFPCRNCEQLGHFASDCDQP--RVPRGPCRNCGIEGHFAVDC-DQPKV 636 Query: 402 ----CYVCGKPGHISREC--DEARN*PQPPC 476 C CG+ GH +++C + R P PC Sbjct: 637 PRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667 Score = 43.2 bits (97), Expect = 2e-04 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 216 C+ C GH ++EC + V R C C + GHFA DC + C C Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622 Query: 217 GTGHIARECAQ 249 GH A +C Q Sbjct: 623 IEGHFAVDCDQ 633 Score = 41.1 bits (92), Expect = 8e-04 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGH 428 C NC GH A +C + + C NC + GH +++C + T+ C C + GH Sbjct: 618 CRNCGIEGHFAVDCDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGH 675 Query: 429 ISREC 443 EC Sbjct: 676 WGYEC 680 Score = 39.9 bits (89), Expect = 0.002 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 267 CYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCPDGTK 398 C NC + GH A++C E R T+ C C + GH CP K Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPK 685 Score = 35.5 bits (78), Expect = 0.040 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 Query: 402 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 494 C+ CG+ GHIS+ECD+ + P+ PC QL Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601 >Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical protein F02E9.2b protein. Length = 196 Score = 43.2 bits (97), Expect = 2e-04 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +3 Query: 309 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 470 P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159 Score = 31.1 bits (67), Expect = 0.86 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 139 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 249 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152 >Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical protein F02E9.2a protein. Length = 227 Score = 43.2 bits (97), Expect = 2e-04 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +3 Query: 309 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 470 P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190 Score = 31.1 bits (67), Expect = 0.86 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 139 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 249 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183 >U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. Length = 227 Score = 43.2 bits (97), Expect = 2e-04 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +3 Query: 309 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 470 P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190 Score = 31.1 bits (67), Expect = 0.86 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 139 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 249 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183 >U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. Length = 227 Score = 43.2 bits (97), Expect = 2e-04 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = +3 Query: 309 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 470 P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190 Score = 31.1 bits (67), Expect = 0.86 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%) Frame = +1 Query: 139 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 249 +CF+C + H A+ C K +A CY C H++ C + Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183 >AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA helicase-3 protein. Length = 720 Score = 43.2 bits (97), Expect = 2e-04 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 333 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 473 + TC+NC K GH + C + C CG P H + EC ++N Q P Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248 Score = 38.3 bits (85), Expect = 0.006 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +1 Query: 142 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 246 CF C + GH A +C C C H A ECA Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238 Score = 35.1 bits (77), Expect = 0.053 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC K GH A C RE C NC H + C +K Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242 >AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line helicase protein 3 protein. Length = 720 Score = 43.2 bits (97), Expect = 2e-04 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +3 Query: 333 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 473 + TC+NC K GH + C + C CG P H + EC ++N Q P Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248 Score = 38.3 bits (85), Expect = 0.006 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +1 Query: 142 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 246 CF C + GH A +C C C H A ECA Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238 Score = 35.1 bits (77), Expect = 0.053 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 398 +C+NC K GH A C RE C NC H + C +K Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242 >Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical protein F11A10.8 protein. Length = 302 Score = 39.1 bits (87), Expect = 0.003 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 440 +C+NC++ GH A CP G+ Q ++ I TCY CG+ GH + Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264 Query: 441 C 443 C Sbjct: 265 C 265 Score = 31.9 bits (69), Expect = 0.49 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 31 MSSSVCYKCNRTGHFARECTQGGV 102 +S CYKC GH+A C +G + Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270 Score = 31.5 bits (68), Expect = 0.65 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 14/89 (15%) Frame = +1 Query: 16 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQR-------EK-------CFKC 153 +KP + C+ C+ GH A C +R + + R +K C+KC Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKC 255 Query: 154 NRTGHFARDCKEEADRCYRCNGTGHIARE 240 GH+A C + A + N T H+A E Sbjct: 256 GEKGHYANRCHKGA-LAFLSN-TAHLAHE 282 Score = 27.9 bits (59), Expect = 8.0 Identities = 9/28 (32%), Positives = 14/28 (50%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEGGRESATQTCY 347 +CY C + GH A C +G + T + Sbjct: 251 TCYKCGEKGHYANRCHKGALAFLSNTAH 278 >U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env protein precursor protein. Length = 2272 Score = 39.1 bits (87), Expect = 0.003 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKPGHISREC 443 C +C + G C + +++A+Q C C +SG H++ + C+ C + GHI+ C Sbjct: 631 CSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNC 690 Score = 37.1 bits (82), Expect = 0.013 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +1 Query: 37 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 213 S C C + G C++ S+D+ +KC +C ++G C + +R C+RC Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680 Query: 214 NGTGHIAREC 243 N GHIA C Sbjct: 681 NEMGHIAWNC 690 Score = 32.3 bits (70), Expect = 0.37 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 386 C C ++G +C + + C+ CN+ GHI+ NCP Sbjct: 656 CDECQQSGWHMASC----FKLKNRACFRCNEMGHIAWNCP 691 Score = 32.3 bits (70), Expect = 0.37 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPE 314 +C+ CN+ GHIA NCP+ Sbjct: 676 ACFRCNEMGHIAWNCPK 692 Score = 31.5 bits (68), Expect = 0.65 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 82 ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 EC Q G S F + CF+CN GH A +C ++ Sbjct: 658 ECQQSGW-HMASCFKLKNRACFRCNEMGHIAWNCPKK 693 >L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1 protein, isoforma protein. Length = 2175 Score = 39.1 bits (87), Expect = 0.003 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKPGHISREC 443 C +C + G C + +++A+Q C C +SG H++ + C+ C + GHI+ C Sbjct: 534 CSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNC 593 Score = 37.1 bits (82), Expect = 0.013 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +1 Query: 37 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 213 S C C + G C++ S+D+ +KC +C ++G C + +R C+RC Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583 Query: 214 NGTGHIAREC 243 N GHIA C Sbjct: 584 NEMGHIAWNC 593 Score = 32.3 bits (70), Expect = 0.37 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 386 C C ++G +C + + C+ CN+ GHI+ NCP Sbjct: 559 CDECQQSGWHMASC----FKLKNRACFRCNEMGHIAWNCP 594 Score = 32.3 bits (70), Expect = 0.37 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPE 314 +C+ CN+ GHIA NCP+ Sbjct: 579 ACFRCNEMGHIAWNCPK 595 Score = 31.5 bits (68), Expect = 0.65 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 82 ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 EC Q G S F + CF+CN GH A +C ++ Sbjct: 561 ECQQSGW-HMASCFKLKNRACFRCNEMGHIAWNCPKK 596 >L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1 protein, isoformb protein. Length = 2186 Score = 39.1 bits (87), Expect = 0.003 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKPGHISREC 443 C +C + G C + +++A+Q C C +SG H++ + C+ C + GHI+ C Sbjct: 545 CSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNC 604 Score = 37.1 bits (82), Expect = 0.013 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +1 Query: 37 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 213 S C C + G C++ S+D+ +KC +C ++G C + +R C+RC Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594 Query: 214 NGTGHIAREC 243 N GHIA C Sbjct: 595 NEMGHIAWNC 604 Score = 32.3 bits (70), Expect = 0.37 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 386 C C ++G +C + + C+ CN+ GHI+ NCP Sbjct: 570 CDECQQSGWHMASC----FKLKNRACFRCNEMGHIAWNCP 605 Score = 32.3 bits (70), Expect = 0.37 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPE 314 +C+ CN+ GHIA NCP+ Sbjct: 590 ACFRCNEMGHIAWNCPK 606 Score = 31.5 bits (68), Expect = 0.65 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 82 ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 192 EC Q G S F + CF+CN GH A +C ++ Sbjct: 572 ECQQSGW-HMASCFKLKNRACFRCNEMGHIAWNCPKK 607 >AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical protein Y116A8C.32 protein. Length = 699 Score = 37.5 bits (83), Expect = 0.010 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 383 C NC H + CP+ + C NC GHIS++C Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468 Score = 35.1 bits (77), Expect = 0.053 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +3 Query: 342 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 443 C NC H S CPD C CG GHIS++C Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468 >AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein protein. Length = 699 Score = 37.5 bits (83), Expect = 0.010 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 Query: 267 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 383 C NC H + CP+ + C NC GHIS++C Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468 Score = 35.1 bits (77), Expect = 0.053 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Frame = +3 Query: 342 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 443 C NC H S CPD C CG GHIS++C Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468 >AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical protein K08D12.3b protein. Length = 42 Score = 37.1 bits (82), Expect = 0.013 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +3 Query: 336 QTCYNCNKSGHISRNCPDG 392 + CY C + GHISRNCP+G Sbjct: 4 RNCYKCQQPGHISRNCPNG 22 Score = 35.5 bits (78), Expect = 0.040 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +3 Query: 264 SCYNCNKTGHIARNCPEG 317 +CY C + GHI+RNCP G Sbjct: 5 NCYKCQQPGHISRNCPNG 22 Score = 31.9 bits (69), Expect = 0.49 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 Query: 31 MSSSVCYKCNRTGHFARECTQG 96 MS CYKC + GH +R C G Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22 Score = 31.1 bits (67), Expect = 0.86 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 396 KTCYVCGKPGHISREC 443 + CY C +PGHISR C Sbjct: 4 RNCYKCQQPGHISRNC 19 Score = 29.1 bits (62), Expect = 3.5 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query: 142 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 231 C+KC + GH +R+C E+D R G G + Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36 >L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 10, isoform a protein. Length = 456 Score = 33.9 bits (74), Expect = 0.12 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 228 HSARVRTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 380 H +V + SC CN TG +++ +GG T TC C SGH ++N Sbjct: 195 HGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243 >L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 10, isoform b protein. Length = 446 Score = 33.9 bits (74), Expect = 0.12 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +3 Query: 228 HSARVRTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 380 H +V + SC CN TG +++ +GG T TC C SGH ++N Sbjct: 195 HGTQVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243 >AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical protein K02F6.1 protein. Length = 783 Score = 32.3 bits (70), Expect = 0.37 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +3 Query: 261 PSCYNCNKTGHIARNCPEGGRES 329 P CY C GH++++CP+ S Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333 Score = 29.5 bits (63), Expect = 2.6 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = +1 Query: 202 CYRCNGTGHIARECAQS 252 CY+C GH++++C QS Sbjct: 313 CYKCKVVGHVSKDCPQS 329 Score = 29.1 bits (62), Expect = 3.5 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = +3 Query: 342 CYNCNKSGHISRNCPDGT 395 CY C GH+S++CP + Sbjct: 313 CYKCKVVGHVSKDCPQSS 330 Score = 28.7 bits (61), Expect = 4.6 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 138 CYKC GH +++C Q S +SG NR+ E Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341 >U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily assigned gene nameprotein 204, isoform b protein. Length = 868 Score = 31.9 bits (69), Expect = 0.49 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +2 Query: 296 RTELSRGGAGVCDADLLQLQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 472 RT L R G + ++V LP SR +DV+ + RQA P + RRG +++ Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702 Query: 473 LSPLQS 490 LS L S Sbjct: 703 LSNLPS 708 >AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical protein F54G2.2 protein. Length = 1023 Score = 31.9 bits (69), Expect = 0.49 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Frame = +3 Query: 252 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 386 P+ C C + G +C P+ RE C+ C + GHIS CP Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/55 (23%), Positives = 23/55 (41%) Frame = +1 Query: 37 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR 201 + +C +C + G C+ + + R +CF C GH + C + DR Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629 Score = 29.5 bits (63), Expect = 2.6 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPE 314 + E P C+ C + GHI+ CP+ Sbjct: 602 KRERPPPQCFTCGEMGHISTYCPK 625 >AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical protein R52.2 protein. Length = 1019 Score = 31.9 bits (69), Expect = 0.49 Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%) Frame = +1 Query: 40 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 213 S C C+ T H R EC R+ CF C R+GH C C C Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370 Query: 214 NGTGH 228 G H Sbjct: 371 KGNHH 375 Score = 28.7 bits (61), Expect = 4.6 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Frame = +3 Query: 267 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 419 C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371 Query: 420 PGHISREC 443 H + C Sbjct: 372 GNHHTVFC 379 >U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein K10D2.3 protein. Length = 1425 Score = 31.1 bits (67), Expect = 0.86 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCKEEADR 201 C++C+R GHF C Q + +R + ++ N +G ++ +E DR Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410 Score = 29.9 bits (64), Expect = 2.0 Identities = 10/47 (21%), Positives = 20/47 (42%) Frame = +3 Query: 252 PDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 392 P + C+ C++ GH +CP+ + + N + R+ G Sbjct: 1352 PTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398 Score = 28.7 bits (61), Expect = 4.6 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +3 Query: 294 IARNCPEGGRESATQTCYNCNKSGHISRNCP 386 + R C +G + Q C+ C++ GH +CP Sbjct: 1342 LLRKCNQGSAPTDRQ-CHQCHRIGHFVESCP 1371 Score = 27.9 bits (59), Expect = 8.0 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 79 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 195 R+C QG + +RQ C +C+R GHF C + A Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA 1374 >Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical protein C27B7.5 protein. Length = 386 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +3 Query: 243 RTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 386 R+ P + +K R GR C++C + GHISR CP Sbjct: 138 RSSPRSDGMGSSSKRPRSGRRTGRRGRGGPGH-CFHCQEHGHISRMCP 184 Score = 28.3 bits (60), Expect = 6.1 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +3 Query: 267 CYNCNKTGHIARNCPE 314 C++C + GHI+R CP+ Sbjct: 170 CFHCQEHGHISRMCPK 185 >Z48543-2|CAA88433.2| 478|Caenorhabditis elegans Hypothetical protein C18D1.2 protein. Length = 478 Score = 30.3 bits (65), Expect = 1.5 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -2 Query: 655 HEALQRARLYTSQQSNLTLQSVARTPLCICTVIGYRVSRVAS 530 H+ LQ+ +YT+ QSNL +VA +C Y + + S Sbjct: 67 HKILQKTYVYTASQSNLLFSAVAIGAMCAVYPFMYIIQKKGS 108 >Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical protein F09C6.10 protein. Length = 153 Score = 29.9 bits (64), Expect = 2.0 Identities = 16/66 (24%), Positives = 26/66 (39%) Frame = +3 Query: 240 VRTEPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGK 419 +R +P +P C N+ + C G + T CN+ +I N CG Sbjct: 46 IRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREYANWNMQKCGI 105 Query: 420 PGHISR 437 P +S+ Sbjct: 106 PHVVSK 111 >U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical protein C17H11.6c protein. Length = 778 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Frame = +3 Query: 384 PD-GTKTCYVCGKPGHISRECDEAR 455 PD GT CY C + H ++ CDEAR Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222 >U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical protein C17H11.6b protein. Length = 796 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Frame = +3 Query: 384 PD-GTKTCYVCGKPGHISRECDEAR 455 PD GT CY C + H ++ CDEAR Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222 >U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical protein C17H11.6a protein. Length = 793 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%) Frame = +3 Query: 384 PD-GTKTCYVCGKPGHISRECDEAR 455 PD GT CY C + H ++ CDEAR Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222 >AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical protein F49F1.8 protein. Length = 615 Score = 29.9 bits (64), Expect = 2.0 Identities = 10/36 (27%), Positives = 14/36 (38%) Frame = +1 Query: 46 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 153 C+ C GH AR C + + G+ Q C Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611 Score = 29.1 bits (62), Expect = 3.5 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 127 RQREKCFKCNRTGHFARDCKEEA 195 R + +C C GH AR+CK++A Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593 >Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical protein F28F8.7 protein. Length = 464 Score = 29.5 bits (63), Expect = 2.6 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +3 Query: 342 CYNCNKSGHISRNCPDGTKTCYVC 413 C NCNK+ PD TK C +C Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325 >AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical protein Y73B3A.13 protein. Length = 418 Score = 29.5 bits (63), Expect = 2.6 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +3 Query: 342 CYNCNKSGHISRNCPDGTKTCYVC 413 C NCNK+ PD TK C +C Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304 >U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein C16A3.7 protein. Length = 1119 Score = 28.7 bits (61), Expect = 4.6 Identities = 21/75 (28%), Positives = 26/75 (34%), Gaps = 2/75 (2%) Frame = +3 Query: 258 EPSCYNCNKTGHIARNCPEGGR--ESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHI 431 + C C + R CP G +S T C + D TC GK H Sbjct: 450 DKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCGTPGKNHHC 509 Query: 432 SRECDEARN*PQPPC 476 +C E P PPC Sbjct: 510 REKCHEG---PCPPC 521 Score = 28.7 bits (61), Expect = 4.6 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -2 Query: 220 CRYICSNGQPLPCNPSQSVLCGC 152 CR C G PCN + SV+C C Sbjct: 509 CREKCHEGPCPPCNLNTSVICRC 531 >AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical protein Y38H6C.5 protein. Length = 915 Score = 28.7 bits (61), Expect = 4.6 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +3 Query: 402 CYVCGKPGHISREC 443 CY CGK GH + EC Sbjct: 411 CYYCGKRGHTANEC 424 >Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical protein F36F2.3b protein. Length = 363 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +3 Query: 318 GRESATQTCYNCNKSGHISRNCP 386 G T TC C++ GH +NCP Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172 >Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein F36F2.3a protein. Length = 1128 Score = 28.3 bits (60), Expect = 6.1 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +3 Query: 318 GRESATQTCYNCNKSGHISRNCP 386 G T TC C++ GH +NCP Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172 >AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related. see also lmb-protein 1 protein. Length = 1067 Score = 28.3 bits (60), Expect = 6.1 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +1 Query: 79 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ 249 R C Q + + GF K C+ G DC +++ +C C G R+C Q Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQ 878 >AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical protein Y48G1BM.5 protein. Length = 994 Score = 28.3 bits (60), Expect = 6.1 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +3 Query: 306 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 458 CP ++ QTC + + R C + + C +C P HI+ C A++ Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972 >Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical protein D1086.6 protein. Length = 282 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = +3 Query: 222 GAHSARVRTEPDEPSCYNCNKTGHIARNCPEGGRE--SATQTCY 347 G H A +RT P+E +C NK + C + +E Q CY Sbjct: 22 GQHDA-IRTNPNEQTCETWNKCDDDQKRCVDKTKEVIYTDQICY 64 >Z50176-3|CAA90540.1| 196|Caenorhabditis elegans Hypothetical protein C09G1.3 protein. Length = 196 Score = 27.9 bits (59), Expect = 8.0 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -2 Query: 706 LFK*FKHNNSLTSCKNKHEALQRARLYTSQQSNL-TLQSVARTPLCICTVIGY-RVSRVA 533 LF+ K NN + +H+ +Q R+ T Q N +LQ V+ C VI + SRVA Sbjct: 6 LFRRTKRNNEEQKTE-EHQDVQETRILTYNQKNAESLQQVSDEVFMSCKVIDWAESSRVA 64 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,877,289 Number of Sequences: 27780 Number of extensions: 331975 Number of successful extensions: 1573 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 1081 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1429 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1756472266 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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