Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20205
(743 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 32 0.007
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 31 0.011
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 31 0.015
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 29 0.046
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 29 0.046
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 29 0.046
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 26 0.32
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 26 0.43
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.57
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 5.3
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 7.0
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 31.9 bits (69), Expect = 0.007
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 682 NSLTSCKNKHEALQRARLYTSQQSNLTLQSVA 587
NS C N+H++LQR L Q++ TLQ +A
Sbjct: 322 NSAVGCWNEHQSLQRQNLEMVAQNDRTLQMIA 353
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 31.1 bits (67), Expect = 0.011
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 685 NNSLTSCKNKHEALQRARLYTSQQSNLTLQSVARTPLCICTVIGYRVSRVASFAY 521
NNS C N+H+ LQR + Q+ TLQ + + R++R+ Y
Sbjct: 324 NNSAIGCWNEHQPLQRQNMDMVAQNEKTLQMIISVKIIQNLAYSGRMNRIHKNEY 378
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 30.7 bits (66), Expect = 0.015
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 685 NNSLTSCKNKHEALQRARLYTSQQSNLTLQSV 590
NNS C N+H+ LQR + Q+ TLQ+V
Sbjct: 324 NNSAIGCWNEHQPLQRENMDMVAQNEETLQTV 355
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 29.1 bits (62), Expect = 0.046
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 682 NSLTSCKNKHEALQRARLYTSQQSNLTLQSVA 587
+S C N+H L+R + T QS+ TLQ +A
Sbjct: 324 DSALGCWNEHRTLERHNIRTVAQSDETLQMIA 355
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 29.1 bits (62), Expect = 0.046
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 682 NSLTSCKNKHEALQRARLYTSQQSNLTLQSVA 587
+S C N+H L+R + T QS+ TLQ +A
Sbjct: 324 DSALGCWNEHRTLERHNIRTVAQSDETLQMIA 355
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 29.1 bits (62), Expect = 0.046
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 682 NSLTSCKNKHEALQRARLYTSQQSNLTLQSVA 587
+S C N+H L+R + T QS+ TLQ +A
Sbjct: 324 DSALGCWNEHRTLERHNIRTVAQSDETLQMIA 355
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 26.2 bits (55), Expect = 0.32
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 682 NSLTSCKNKHEALQRARLYTSQQSNLTLQSV 590
NS +C N+H+ LQR Q+ TLQ +
Sbjct: 327 NSGIACVNEHQVLQRESFDVVAQNEETLQMI 357
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 25.8 bits (54), Expect = 0.43
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = +3
Query: 261 PSCYNCNKTGHIARNCPEGGRESATQTCYNCNK 359
P C C H + CP+G + T N K
Sbjct: 76 PICGACGDIAHTVKYCPKGTKNPGTLATVNAFK 108
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 342 CYNCNKSGHISRNCPDGTK 398
C C H + CP GTK
Sbjct: 78 CGACGDIAHTVKYCPKGTK 96
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.4 bits (53), Expect = 0.57
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 685 NNSLTSCKNKHEALQRARLYTSQQSNLTLQSV 590
NN+L SC N+H++L R + ++ TLQ V
Sbjct: 322 NNTL-SCWNEHQSLDRQNIDVVARNEDTLQMV 352
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +1
Query: 10 EFSKPIAMSSSVCYKCNRTGHFAR 81
+ KP+ +V Y ++G+F+R
Sbjct: 165 DIGKPVVAEETVDYMLEKSGNFSR 188
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 374 PQLSRRHQDVLRVRQARPHLARVRR 448
P+L+ R V ARPH + V R
Sbjct: 110 PELTNRKSVVFHHDNARPHTSLVTR 134
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,632
Number of Sequences: 438
Number of extensions: 3763
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -