Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20203
(742 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 79 5e-15
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 68 7e-12
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 66 2e-11
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 51 9e-07
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 49 3e-06
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 44 2e-04
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 31 1.3
SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95) 30 1.7
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_57619| Best HMM Match : DUF229 (HMM E-Value=0) 29 5.2
SB_6267| Best HMM Match : DUF930 (HMM E-Value=3.6) 29 5.2
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 28 6.9
SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24) 28 6.9
SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14) 28 9.1
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 28 9.1
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436
+DLI +LKSE+ G E+ ++ALMTP + A L A+ G+GTDE +IE+L T +N I
Sbjct: 132 RDLIKDLKSEVGGYFEDTVIALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEI 191
Query: 437 RTISAFYEQLYGKSLESDLKGDTS 508
I Y L+ + LE D+ GDTS
Sbjct: 192 IAIRNAYNTLFSRDLEKDIAGDTS 215
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 630 GNDESIFNSILITRSYQQLRQIFAEY 707
G DES FNSIL +RS+ QLR F EY
Sbjct: 238 GTDESKFNSILASRSFDQLRATFNEY 263
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYAR 260
LRKA+KG GTDE +I+VL R + + I + T ++R
Sbjct: 165 LRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSR 204
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 380 GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSDTSRDCACRCAWPIAMK 559
G D +A++ +LC+ +N + IS Y+ ++G+ L DLK + D P A
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAEY 160
Query: 560 TRASMKAQLK 589
++ +K
Sbjct: 161 DATLLRKAIK 170
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYAR 260
TL A G D KA++ +LC R QR I+ +KT + R
Sbjct: 92 TLDIASNKPGCDNKALMYLLCSRTNSQRQRISLEYKTMFGR 132
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 621 RSMGNDESIFNSILITRSYQQLRQIFAEYEALTGKDIE 734
+ +G DE++ +L TR+ ++ I Y L +D+E
Sbjct: 170 KGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLE 207
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 68.1 bits (159), Expect = 7e-12
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436
KDL+++LKSEL+GNLE ++A+M P + AK L + G GTDEE +I+ILCT SN G
Sbjct: 32 KDLMNDLKSELSGNLEECLLAMMEPSVLYDAKCLRRGMRGAGTDEETLIDILCTRSNQGN 91
Query: 437 R 439
R
Sbjct: 92 R 92
Score = 35.1 bits (77), Expect = 0.060
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRR 206
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 383 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSDTSRDC 526
T+E +I IL SN I Y+ +YGK L +DLK + S +C
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEEC 49
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 621 RSMGNDESIFNSILITRSYQQLRQIFAEY 707
+ G DES FN +L +RS+ QL+ F EY
Sbjct: 116 KKWGTDESRFNVVLASRSFPQLQATFNEY 144
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436
KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +IEILCT SN I
Sbjct: 488 KDLVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLIEILCTRSNAEI 547
Query: 437 RTISAFYEQLYGKSLESDLKGDTS 508
+ I Y + YG+SL D+K +TS
Sbjct: 548 QEIKQEYNKKYGRSLTDDMKSETS 571
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYART 263
+L AMKG GT E +I++LC R + EI + + Y R+
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRS 561
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 621 RSMGNDESIFNSILITRSYQQLRQIFAEY 707
+ G DE F I TRSY QL+ +F EY
Sbjct: 184 KKWGTDEDCFIEIFTTRSYPQLQAMFPEY 212
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 350 KELHDAVSGI---GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSDTSR 520
++LH+AV+ + G + +A + + N I +I Y++ YG SLE D+K +TS
Sbjct: 60 EDLHEAVAAMLLPGNEADART-LYFAMKN--IDSIKEEYQKKYGCSLEDDVKEETSGDFE 116
Query: 521 D 523
D
Sbjct: 117 D 117
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 630 GNDESIFNSILITRSYQQLRQIFAEYEALTG 722
G DE F +IL RS ++ + AEY+ L+G
Sbjct: 613 GTDEDQFITILSQRSSAHVQAVLAEYKTLSG 643
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436
KDL ELKS L + + +L AK L++A G GTDE+A+I ILCT SN G
Sbjct: 51 KDLNEELKSVLDEEIMKALESLAEEAAMKDAKTLYEATKGFGTDEDALISILCTRSNKGQ 110
Query: 437 R 439
R
Sbjct: 111 R 111
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/57 (36%), Positives = 37/57 (64%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 427
+D++ L+ L ++++ + + + F AK LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 396 QDILEALQPHLGDDVKDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRR 206
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 624 SMGNDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDS 740
S G DE F + RS+ Q+ + AEY+ LT +IE+S
Sbjct: 136 SWGTDEGAFIRVFTQRSFTQISAMCAEYKKLTKVEIEES 174
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRR 206
L A+KG GTDE +I+++C R
Sbjct: 429 LHDAIKGLGTDEDLLIEIICTR 450
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNY 254
L+KAMKGFG+DE+AII+VL + QRL IA++FK Y
Sbjct: 311 LKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQY 348
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 433
KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +IE LCT SN G
Sbjct: 91 KDLVEQLDGKVADDVHEAVTSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTG 149
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAII 403
KDL++ELKSEL+G E+ IVAL+ P A LH A+ + I+
Sbjct: 350 KDLVNELKSELSGKFEDAIVALLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +2
Query: 347 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSDTSRD 523
A++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + S D
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFED 366
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 621 RSMGNDESIFNSILITRSYQQLRQIFAEYEALTGKDI 731
+ G DES+F IL RS QLR ++ Y+ + DI
Sbjct: 416 KKWGTDESVFTKILTCRSDLQLRALYQAYQHVAKCDI 452
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRR 206
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/84 (26%), Positives = 46/84 (54%)
Frame = +2
Query: 257 KDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 436
+D+++ + E++G+L+ + P +F A L ++ G GTD+ +I ++ + S +
Sbjct: 61 RDIMNSIDREMSGDLKAGLQCARNPAEYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDL 119
Query: 437 RTISAFYEQLYGKSLESDLKGDTS 508
I A + Q Y K++ ++GD S
Sbjct: 120 VEIKASFLQKYHKTVYKMIEGDCS 143
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 621 RSMGNDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDS 740
+ G DES FN +L +RS+ QL+ F EY ++ +DI +S
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNS 66
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYART 263
L K+MKG GTD+ +I V+ R V +EI +F Y +T
Sbjct: 93 LWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKT 133
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 IVALMTPLPHFYAK-ELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 478
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 479 LESDLKGDTS 508
+E+ LKG +S
Sbjct: 597 VEA-LKGKSS 605
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +3
Query: 270 ANSRVNSPATWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYP 449
A N P T S +P T+ + ++ L+PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 450 HFTNNCTARA 479
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 1037
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Frame = +2
Query: 251 LCKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILC---TL 421
+ K L+ +K+E TGN E + + +PHF++ + + S + E + +
Sbjct: 688 MVKLLLQFIKAERTGNWELHLASTAAMIPHFFSMDRPNYSSWKSKNPRVFEEFMAGNHAV 747
Query: 422 SNYGIRTISAFYEQLYGKSLESD--LKGDTSDTSRDCACRCAWPIAMKTRASMKAQLK 589
S G + + +S+ +D KG S++ A W + RAS+ LK
Sbjct: 748 SRSGQPFSQVWTDMALEQSVNADSKSKGGIVGISQNPAALQRWFLTSHERASVTTALK 805
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 334 APLLR*GAPRCCLRNWNRRRSHHRDP 411
+P L PRCC +N N R H DP
Sbjct: 138 SPFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_57619| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 616
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -3
Query: 563 WFSSRLAMHNDTHNLLKCPTCRLLSP 486
WF S+ H D HN LK T RL SP
Sbjct: 411 WFKSK---HPDVHNALKANTDRLTSP 433
>SB_6267| Best HMM Match : DUF930 (HMM E-Value=3.6)
Length = 502
Score = 28.7 bits (61), Expect = 5.2
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +3
Query: 171 DEKAIIDVLCR-RGIVQRLEIAETFKTNYART*LANSRVNSPATWKMSSSH**LPCPTST 347
D + +++ LC G ++ ++A + + T LAN+ +S + S +P T
Sbjct: 179 DRETLVEHLCAFEGFREQGDLAAAMRAD-TPTILANT--DSVGSTSAPGSAQAMPA-TQC 234
Query: 348 LRSSTMLSQELEPTKKPSSRSCARFPTMVSVPY--PHFTNN 464
RSST S + + S+S A +PTM + Y P T N
Sbjct: 235 ARSSTTRSYRISKRARSESQSAAIWPTMSTARYGRPSCTQN 275
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 344 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 484
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 493 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 539
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 344 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 484
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 47 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 93
>SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24)
Length = 285
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 344 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 484
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 229 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 275
>SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14)
Length = 812
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +1
Query: 406 DPVHAFQLWYPYHIRILRTTVRQEPG----IGLKRRHVGHFKRLCVSLCMA 546
+PVH F YH ++ R R+ PG IG K R + R L +A
Sbjct: 727 NPVHGFSSGLRYHEQVTRNQARKSPGSDSEIGQKARILKRGSRQVSDLAIA 777
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 344 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 481
Y K + + VSG GTD + + I T+S ISA L+ K++
Sbjct: 582 YVKYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAV 627
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,795,017
Number of Sequences: 59808
Number of extensions: 431569
Number of successful extensions: 1445
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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