Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20200
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 189 2e-48
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 180 1e-45
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 3e-43
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 142 3e-34
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 1e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 59 3e-09
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.96
SB_59310| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 2.9
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 29 2.9
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.9
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 3.9
SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.1
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 28 6.7
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.9
SB_30272| Best HMM Match : GDI (HMM E-Value=0) 28 8.9
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_5912| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-08) 28 8.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 189 bits (461), Expect = 2e-48
Identities = 99/149 (66%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
Frame = +3
Query: 75 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 255 *TP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRHV-SDGGKPKIKVAYKGEDKTFFPEE 428
P T + + ++ + T HV +G +PKI+V +KGE K+FFPEE
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARD--MTHWPFHVIREGERPKIQVEFKGEKKSFFPEE 118
Query: 429 VSSMVLTKMKETAEAYLGKTVQNAVITFP 515
+SSMVLTKMKETAEAYLG V +AV+T P
Sbjct: 119 ISSMVLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 133 bits (322), Expect = 1e-31
Identities = 68/129 (52%), Positives = 83/129 (64%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEACQ*WRQT*DQGSI*G*RQNLFPRGSQ 433
+NP NT+FDAKRLIGRKF+D V DM HWPF + + Q G +++ FP
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 434 FHGAYENEGNCRSLSWQNCAECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 613
+ + + + VPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 614 IAYGLDKRV 640
IAYGLDK+V
Sbjct: 181 IAYGLDKKV 189
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 646 ERNVLIFDLGGGT 684
ERNVLI+DLGGGT
Sbjct: 192 ERNVLIYDLGGGT 204
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 180 bits (437), Expect = 1e-45
Identities = 95/148 (64%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Frame = +3
Query: 75 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 255 *TP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRHVSDGGKPKIKVAYKGEDKTFFPEEV 431
P T + + + + + +SD KPKI+V YKGE KTF EE+
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATV-QSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEI 119
Query: 432 SSMVLTKMKETAEAYLGKTVQNAVITFP 515
SSMVL KMKETAEAYLG+ V +AVIT P
Sbjct: 120 SSMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 129 bits (311), Expect = 3e-30
Identities = 68/127 (53%), Positives = 82/127 (64%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEACQ*WRQT*DQGSI*G*RQNLFPRGSQ 433
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+ + Q G R+
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 434 FHGAYENEGNCRSLSWQNCAECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 613
+ + + Q VPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAA 180
Query: 614 IAYGLDK 634
+AYGLDK
Sbjct: 181 LAYGLDK 187
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 640 TGERNVLIFDLGGGT 684
+GE+NVLIFDLGGGT
Sbjct: 190 SGEKNVLIFDLGGGT 204
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 172 bits (418), Expect = 3e-43
Identities = 108/215 (50%), Positives = 126/215 (58%), Gaps = 50/215 (23%)
Frame = +3
Query: 75 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 255 *TPTT-----------QYSMPNVSSDVSS--------------KMLLCKPT*STGLSRHV 359
PT ++ P V D+ K+ T + V
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 360 SDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRT------ 521
++ G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQR 180
Query: 522 -------------------SMTLKDKPQKMQVPSL 569
MT +D+P KMQ+ S+
Sbjct: 181 QATKDAGESVRGVCWARSGQMTPRDRPLKMQISSM 215
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 509 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKRV 640
VPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDK+V
Sbjct: 239 VPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKV 282
Score = 58.4 bits (135), Expect = 6e-09
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 352
+NP NTIFDAKRLIGR+F+D V+ DMKHW FE
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFE 93
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3
Query: 426 EVSSMVLTKMKETAEAYLGKTVQNAVITFP 515
++SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 509 VPAYFNDSQRQATKDAG 559
VPAYFNDSQRQATKDAG
Sbjct: 171 VPAYFNDSQRQATKDAG 187
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 646 ERNVLIFDLGGGT 684
ERNVLIFDLGGGT
Sbjct: 285 ERNVLIFDLGGGT 297
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 142 bits (343), Expect = 3e-34
Identities = 79/142 (55%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVA*TPTT 269
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 270 QYSMPNVSSDVSSKMLLCKPT*STGLSRHVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 449
S + + V KP ++V K E KTF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 450 KMKETAEAYLGKTVQNAVITFP 515
KMKETAEAYLGK V +AV+T P
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVP 845
Score = 108 bits (259), Expect = 5e-24
Identities = 57/127 (44%), Positives = 77/127 (60%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEACQ*WRQT*DQGSI*G*RQNLFPRGSQF 436
NP NT+FDAKRLIGR ++D +VQ D+K +PF+ ++ Q + +
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISA 819
Query: 437 HGAYENEGNCRSLSWQNCAECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 616
+ + + + VPAYFND+QRQATKDAG I+GL V+RIINEPTAAAI
Sbjct: 820 MVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAI 879
Query: 617 AYGLDKR 637
AYG+DK+
Sbjct: 880 AYGMDKK 886
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 634 KGTGERNVLIFDLGGGT 684
K GE+N+L+FDLGGGT
Sbjct: 885 KKEGEKNILVFDLGGGT 901
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 80.6 bits (190), Expect = 1e-15
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Frame = +3
Query: 81 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 255 *TP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRHVSDGGKPKIKVAYKGEDKTFFPEEV 431
P T Y +K L + G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 432 SSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQKMQVPSLA 572
V+ K++ AE L TV AV++ P +K + ++ SLA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAASLA 195
Score = 71.3 bits (167), Expect = 7e-13
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEACQ*WRQT*DQGSI*G*RQNLFPRGSQ 433
+NP NTI+DAKR IG+ F + K + F R + G + G + N +
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRG--NAGFLVGKKGNFTVITPE 147
Query: 434 FHGAYENEGNCRSLSWQNCA----ECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEP 601
G Y + R+++ +N + VPA F+ QR AT A +++G+ VLR+INEP
Sbjct: 148 EIGGYVIK-KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEP 206
Query: 602 TAAAIAYGLDKR 637
TAAA+AYGL K+
Sbjct: 207 TAAALAYGLHKK 218
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 68.5 bits (160), Expect = 5e-12
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEACQ*WRQT*D-QGSI*G*RQNLFPRGSQ 433
N NTI KR IGRKF D VQ ++ H P++ + + Q G +Q +F
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLG-KQEVFSPEQV 176
Query: 434 FHGAYENEGNCRSLSWQN-CAECSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 610
+ ++ + +C VP+Y+ D QR+ DA +GLN LR++N+ TA
Sbjct: 177 MAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAV 236
Query: 611 AIAYGLDKRVLENE 652
++AYG+ K+ L +
Sbjct: 237 SLAYGIYKQDLPTD 250
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 248
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 381 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 515
I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+ P
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 59.3 bits (137), Expect = 3e-09
Identities = 38/66 (57%), Positives = 42/66 (63%), Gaps = 24/66 (36%)
Frame = +2
Query: 509 VPAYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAI 616
VPA+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAI
Sbjct: 45 VPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAI 104
Query: 617 AYGLDK 634
AYGLDK
Sbjct: 105 AYGLDK 110
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +3
Query: 381 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 515
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVIT P
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 509 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 628
VP +FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 112 VPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 375 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFP 515
P +K Y+ D TF PEE+ M+L + E + +++ V+T P
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 144 GKVEIIANDQGNRTTPSYVAFTDTERLI 227
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 31.1 bits (67), Expect = 0.96
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 238
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 239 QEPGGVNPNNTIFDA 283
G++P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 153 EIIANDQGNRTTPSYVAFT-DTERL 224
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_59310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 433 LTSSGKKVLSSPLYATLILGLPPSLTCLERPVLHVGLHSSIFELTSDETFGIEY 272
+T +G V + GL ++ CL RP+ H +H S ++ + FG+ +
Sbjct: 194 ITHNGMLVSTYHTQWNACFGLSHTMECLFRPITHNRMHVSTYQTQWNACFGLSH 247
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -1
Query: 433 LTSSGKKVLSSPLYATLILGLPPSLTCLERPVLHVGLHSSIFELTSDETFGIEYCV 266
+T +G V + GL ++ CL RP+ H G+ S + + FG+ + +
Sbjct: 8 ITHNGMLVSAYHTQWNACFGLSHTMECLFRPITHNGMLVSTYHTQWNACFGLSHAM 63
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -1
Query: 433 LTSSGKKVLSSPLYATLILGLPPSLTCLERPVLHVGLHSSIFELTSDETFGIEYCV 266
+T +G V + GL ++ CL RP+ H G+ S + + FG+ + +
Sbjct: 39 ITHNGMLVSTYHTQWNACFGLSHAMKCLFRPITHNGMLVSAYHTQWNACFGLSHAM 94
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 372 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQK 551
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 552 MQ 557
Q
Sbjct: 714 SQ 715
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 29.5 bits (63), Expect = 2.9
Identities = 30/127 (23%), Positives = 51/127 (40%)
Frame = +3
Query: 207 TDTERLIGDAAKNQVA*TPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRHVSDGGKPKIK 386
TDT++ G + + + +++SMP V + S K + L S G K+
Sbjct: 2251 TDTQQGDGPTSDEKTSGKSPSKHSMPTVGLEFSPNKPASKRFSTGSLRSRKSKGSVEKVD 2310
Query: 387 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITFPRTSMTLKDKPQKMQVPS 566
G KT +SS K K +++ ++ S ++ +P+KM S
Sbjct: 2311 KTEGGSPKTV----LSSTFEVKGKGLGSQPESRSIPSSPPFASPKSSSVMQQPRKMSSRS 2366
Query: 567 LA*TFSE 587
LA SE
Sbjct: 2367 LATALSE 2373
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 419 PRGSQFHGAYENEGNCRSLSWQNCAECSYHVPAYFN 526
PRG Q Y G+C S+S +NC + S+ V +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 557 LHLLWLVFESH*STRERDNCILHSFAKIS 471
++ LWL F + S+ D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_43628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 529 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLI 380
VI + GN +T + + R V +FV ++ L+ G VLS P+ T++
Sbjct: 36 VIVLFGNSLTLYIVLSNRRLRTVPNLFVVSLALSDLGMGVLSMPMCITVL 85
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 21 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 107
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 238
L++ N + ++ R GY L R C R + +R + H++L R +RC
Sbjct: 661 LRLVNTRDDKTHGKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTDTETRFCEKRCA 718
Query: 239 QEPGGVNPNNTIFDA 283
G++P N F+A
Sbjct: 719 GTASGMDPKNIPFNA 733
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 137 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGVN 259
P R DH R ++ RH A +R +EPGGV+
Sbjct: 942 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVH 982
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 137 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGVN 259
P R DH R ++ RH A +R +EPGGV+
Sbjct: 75 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVH 115
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 202 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 327
R+ P S+ PP RW+ P Q QT H R Y S
Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 103 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 246
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_30272| Best HMM Match : GDI (HMM E-Value=0)
Length = 1199
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -2
Query: 426 PRGKRFCLHPYMLP*S*VCLHH*HASKGQCFMSACTVASSNLRPMRRLASNIVLLGFTPP 247
PRG R C HP+ P S V L H ++ CF+ L R L+ ++VLL TP
Sbjct: 1046 PRG-RACRHPFSRPNSLVVL---HLTRSSCFI---------LLARRALSYSLVLLYLTPS 1092
Query: 246 GSWRHL--R*DARCL*TQHKTEWSC 178
+ L R + L H T SC
Sbjct: 1093 SCFILLARRASSYSLVVLHLTRSSC 1117
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 103 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 246
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_5912| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-08)
Length = 337
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -1
Query: 529 VIEVRGNVITAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLY----ATLILGLPPS 362
VI + GN++ F R S S+ + + LT ++ PLY + ILG+ S
Sbjct: 34 VIAITGNLLVLFSIWKCRLLSEPSYFLLGVLALTDLAVGIIVQPLYVLYKTSEILGM-AS 92
Query: 361 LTCL 350
+TC+
Sbjct: 93 ITCV 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,420,535
Number of Sequences: 59808
Number of extensions: 594138
Number of successful extensions: 1770
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1759
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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