Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20198
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.36 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = -2

Query: 281 FNLRLVHHL--PYVFLVGTVALLC----HLIFIKWSISL*CSLQAFRFIDPFFPLSCIF 123
           F +  VH L   Y F    + LLC    +  FI +++ L   L  + F+ P F L CI+
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIY 147


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 420 FFIIYKQNIKLFSIYLVFLFV 482
           FF  Y+   K +S+++VF+ V
Sbjct: 164 FFASYQYGTKTYSLFIVFMTV 184


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 420 FFIIYKQNIKLFSIYLVFLFV 482
           FF  Y+   K +S+++VF+ V
Sbjct: 164 FFASYQYGTKTYSLFIVFMTV 184


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 488 Y*SYILLFYLKYSFFFTYYS 547
           Y ++I+LFYL       YY+
Sbjct: 321 YCNFIILFYLSVFVILVYYA 340


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 405 ESCHFFFIIYKQNIKLFSIYLVF 473
           +S +F+F  Y  +  L S+Y +F
Sbjct: 52  KSDYFYFSFYITSYTLLSVYSLF 74


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 405 ESCHFFFIIYKQNIKLFSIYLVF 473
           +S +F+F  Y  +  L S+Y +F
Sbjct: 52  KSDYFYFSFYITSYTLLSVYSLF 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,050
Number of Sequences: 336
Number of extensions: 2283
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)