Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20194
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   3.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.6  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   8.0  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 582 NKYFWSF*DILSHIDLSKFLIHFYK 508
           N +FWS+   +S+I  +   + FYK
Sbjct: 122 NCFFWSYQSYMSYIFANIMGLEFYK 146


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 582 NKYFWSF*DILSHIDLSKFLIHFYK 508
           N +FWS+   +S+I  +   + FYK
Sbjct: 122 NCFFWSYQSYMSYIFANIMGLEFYK 146


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 513 YKNLYFITMVIEYGDYLNLCGTFYSSI 433
           Y N   +T+  EY    NL G F  SI
Sbjct: 326 YDNEQSVTIKTEYAKEKNLAGVFIWSI 352


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 600 LQNFICNKYFWSF*DILS 547
           L NF+ N  FW F  I++
Sbjct: 247 LANFLTNLLFWEFDQIVN 264


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
          protein protein.
          Length = 102

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 40 NCSFPSSHIIFTSSL 84
          NC + S H++ +SSL
Sbjct: 24 NCHYTSGHLLGSSSL 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,446
Number of Sequences: 336
Number of extensions: 2565
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)