Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20194
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019087-1|AAH19087.1|  526|Homo sapiens chromosome 14 open read...    30   7.2  
AY260577-1|AAP86638.1|  526|Homo sapiens FLJ20371 protein.             30   7.2  
AY260572-1|AAP86633.1|  526|Homo sapiens FLJ20371 protein.             30   7.2  
AK027804-1|BAB55381.1|  274|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AK000378-1|BAA91126.1|  526|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AF456126-1|AAO15528.1|  526|Homo sapiens feline leukemia virus s...    30   7.2  
AC007182-2|AAD51374.1|  526|Homo sapiens unknown protein.              30   7.2  

>BC019087-1|AAH19087.1|  526|Homo sapiens chromosome 14 open reading
           frame 58 protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 301 IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 338


>AY260577-1|AAP86638.1|  526|Homo sapiens FLJ20371 protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 301 IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 338


>AY260572-1|AAP86633.1|  526|Homo sapiens FLJ20371 protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 301 IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 338


>AK027804-1|BAB55381.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14898 fis, clone PLACE1004969. ).
          Length = 274

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 49  IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 86


>AK000378-1|BAA91126.1|  526|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20371 fis, clone HEP19701. ).
          Length = 526

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 301 IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 338


>AF456126-1|AAO15528.1|  526|Homo sapiens feline leukemia virus
           subgroup C receptor-related protein FLVCR2 protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 301 IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 338


>AC007182-2|AAD51374.1|  526|Homo sapiens unknown protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 525 LIHFYKNLYFITMVIEYGDYLNLCGTFY--SSIVSRVILKH 409
           +   +KNL F+ +VI YG  LN  G FY  S++++R+++ H
Sbjct: 301 IARLFKNLNFVLLVITYG--LN-AGAFYALSTLLNRMVIWH 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,325,464
Number of Sequences: 237096
Number of extensions: 1136933
Number of successful extensions: 1272
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)