Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20194
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73271-1|AAA28574.1|  906|Drosophila melanogaster glutamate rece...    28   8.5  
BT010006-1|AAQ22475.1|  907|Drosophila melanogaster RE27895p pro...    28   8.5  
AE014134-943|AAF52268.1|  907|Drosophila melanogaster CG6992-PI ...    28   8.5  

>M73271-1|AAA28574.1|  906|Drosophila melanogaster glutamate
           receptor subunit protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 86  YKEDVKIIWEDGNEQFRQQRI 24
           Y +D +I+W++ +E F +QRI
Sbjct: 201 YADDYRILWKETDETFHEQRI 221


>BT010006-1|AAQ22475.1|  907|Drosophila melanogaster RE27895p
           protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 86  YKEDVKIIWEDGNEQFRQQRI 24
           Y +D +I+W++ +E F +QRI
Sbjct: 201 YADDYRILWKETDETFHEQRI 221


>AE014134-943|AAF52268.1|  907|Drosophila melanogaster CG6992-PI
           protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 86  YKEDVKIIWEDGNEQFRQQRI 24
           Y +D +I+W++ +E F +QRI
Sbjct: 201 YADDYRILWKETDETFHEQRI 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,382,119
Number of Sequences: 53049
Number of extensions: 355457
Number of successful extensions: 548
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)