Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20193
(817 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 103 2e-22
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 102 3e-22
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 99 2e-21
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 84 1e-16
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 72 5e-13
09_01_0039 - 687711-688607,692336-693113,693414-693501,693761-69... 31 1.4
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 30 1.9
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 30 2.5
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 29 4.4
07_03_0105 + 13455906-13457198 29 5.8
04_01_0418 - 5531652-5531827,5535111-5535195,5535250-5535402,553... 29 5.8
01_07_0346 + 42889121-42890406,42896115-42896118 29 5.8
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578... 29 5.8
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 7.7
09_06_0175 + 21350528-21351136 28 7.7
05_06_0149 - 25991761-25993181,25993246-25993324 28 7.7
04_04_0930 - 29480700-29480853,29481007-29483036 28 7.7
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 7.7
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 103 bits (246), Expect = 2e-22
Identities = 48/90 (53%), Positives = 64/90 (71%)
Frame = +2
Query: 242 SEGHRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGA 421
+ + KF+ GDSYIIL+TT+ +L DIHYWIG++++QDESG AAILTV LD GG
Sbjct: 67 ASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDESGTAAILTVELDAALGGR 126
Query: 422 AVQHRETMGHESALFLSYFQTPLTYLEGGI 511
AVQ+RE G+E+ FLSYF+ + GG+
Sbjct: 127 AVQYREIQGNETDKFLSYFRPCIMPQPGGV 156
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 616 ASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGR 759
+S+N D F+L + I+ F G + E+ KA+ ++D H G+
Sbjct: 170 SSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTFHEGK 217
Score = 33.5 bits (73), Expect = 0.21
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +3
Query: 189 TAGVQIWRIQNFEPIPV 239
T G++IWRI+NF+P+P+
Sbjct: 49 TGGLEIWRIENFKPVPI 65
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +2
Query: 242 SEGHRKFYKGDSYII--LRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFG 415
S KFY GD YI + D L I W G++S +++ A L + +
Sbjct: 420 SADQSKFYTGDCYIFQYMYPGDDKEECL---IGSWFGKKSIEEDRVTAISLASKMVESAK 476
Query: 416 GAAVQHRETMGHESALFLSYFQTPLTYLEGGI 511
AVQ R G E F FQ+ +GG+
Sbjct: 477 FQAVQTRLYEGKEPIQFFVIFQS-FQVFKGGL 507
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 102 bits (245), Expect = 3e-22
Identities = 46/89 (51%), Positives = 63/89 (70%)
Frame = +2
Query: 245 EGHRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAA 424
E H +F+ GDSY+IL+TT+ + DIHYW+G++++QDE+G AAI TV LD GG A
Sbjct: 94 ESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRA 153
Query: 425 VQHRETMGHESALFLSYFQTPLTYLEGGI 511
VQ+RE G+E+ FLSYF+ + EGGI
Sbjct: 154 VQYREVQGNETERFLSYFKPCIIPEEGGI 182
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 400 GRQVRGRRGPAPRDHGSRKCFVPIIFPDTLDLFGGRDPSGFNHVVTNAGAQ-KRMFQVKG 576
GR V+ R F P I P+ G SGF H N R+F +G
Sbjct: 151 GRAVQYREVQGNETERFLSYFKPCIIPEE-----GGIASGFRHTEINEREHVTRLFVCRG 205
Query: 577 KRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHG 756
K V V++V +S+N D F+L + I+ F G + E+ KA+ ++D +H G
Sbjct: 206 KHTVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDSNHEG 265
Query: 757 R 759
+
Sbjct: 266 K 266
Score = 41.9 bits (94), Expect = 6e-04
Identities = 36/119 (30%), Positives = 49/119 (41%)
Frame = +2
Query: 155 QSPSGFCQCRQNSRCANMENTELRTNTRCSEGHRKFYKGDSYIILRTTSDSRNNLSWDIH 334
+ P C N + + TE +T SE KFY GD YI + + I
Sbjct: 441 EEPQPQIDCTGNLQVWRVNGTE-KTFLSFSE-QCKFYSGDCYIF-QYSYPGEEGEECLIG 497
Query: 335 YWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGI 511
W G++S QDE A + + + AV R G E A F S FQ L +GG+
Sbjct: 498 TWFGKKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGV 555
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +1
Query: 565 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEK 705
Q G +++ QVD S+N C+VL + ++ ++G + ++++
Sbjct: 584 QGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTLFTWIGNLSSSMDQ 630
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 99 bits (238), Expect = 2e-21
Identities = 45/90 (50%), Positives = 61/90 (67%)
Frame = +2
Query: 242 SEGHRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGA 421
+ H KFY GDSYIIL+TT+ + D+HYW+G++++QDE+G AAILTV LD GG
Sbjct: 54 TSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEAGTAAILTVELDAALGGR 113
Query: 422 AVQHRETMGHESALFLSYFQTPLTYLEGGI 511
AVQ+RE G E+ LSYF+ + GG+
Sbjct: 114 AVQYREVQGGETEKLLSYFRPCIMPQPGGV 143
Score = 52.4 bits (120), Expect = 4e-07
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 400 GRQVRGRRGPAPRDHGSRKCFVPIIFPDTLDLFGGRDPSGFNHVVTNAGAQ-KRMFQVKG 576
GR V+ R F P I P G SGFNHV N R++ +G
Sbjct: 112 GRAVQYREVQGGETEKLLSYFRPCIMPQP-----GGVASGFNHVEVNQQDHVTRLYVCQG 166
Query: 577 KRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHG 756
K V V++V +S+N D F+L N I+ F G + E+ KA+ ++D H G
Sbjct: 167 KHVVHVKEVPFVRSSLNHEDIFILDTANKIFQFNGSNSCIQERAKALEVVQYIKDTFHEG 226
Query: 757 R 759
+
Sbjct: 227 K 227
Score = 31.9 bits (69), Expect = 0.63
Identities = 9/16 (56%), Positives = 16/16 (100%)
Frame = +3
Query: 192 AGVQIWRIQNFEPIPV 239
+G+++WRI+NF+P+PV
Sbjct: 37 SGLEVWRIENFKPVPV 52
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +1
Query: 565 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVE 702
Q G +++ QVD +S+N C++L N ++ + G +++
Sbjct: 540 QGSGSENMQAIQVDAVSSSLNSSYCYILHNGNTVFTWTGNLTTSLD 585
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 84.2 bits (199), Expect = 1e-16
Identities = 41/75 (54%), Positives = 50/75 (66%)
Frame = +2
Query: 284 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESAL 463
I T S +DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDK 113
Query: 464 FLSYFQTPLTYLEGG 508
FLSYF+ + LEGG
Sbjct: 114 FLSYFKPCIIPLEGG 128
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +2
Query: 257 KFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHR 436
KFY GD YI+L T + + YWIG++S ++ A + + G + R
Sbjct: 420 KFYSGDCYIVLYTYHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGR 479
Query: 437 ETMGHESALFLSYFQTPLTYLEGGI 511
G E F++ FQ P+ L+GGI
Sbjct: 480 IYQGKEPPQFIALFQ-PMVILKGGI 503
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +1
Query: 550 QKRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFAN 729
+ R++ KGKR +RV++V +S+N D F+L + IY F G + E+ KA+
Sbjct: 142 ETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAIQ 201
Query: 730 QVRDQDHHG 756
+++ H+G
Sbjct: 202 HLKETYHNG 210
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 72.1 bits (169), Expect = 5e-13
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +2
Query: 251 HRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQ 430
H KFY G++YIIL T ++HYW+G E+ +++ A+ + LD G VQ
Sbjct: 35 HGKFYTGNTYIILSTVELKSGVRQHNVHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQ 94
Query: 431 HRETMGHESALFLSYFQTPLTYLEGGI 511
+RET G ES FLSYF+ + ++G +
Sbjct: 95 YRETQGEESDKFLSYFKPCIIPIQGSL 121
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/116 (26%), Positives = 49/116 (42%)
Frame = +2
Query: 161 PSGFCQCRQNSRCANMENTELRTNTRCSEGHRKFYKGDSYIILRTTSDSRNNLSWDIHYW 340
P F C + + ++N + C+E + Y GD YII + + + W
Sbjct: 392 PRHFISCNGSLKVWLVDNGSV--TLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAW 448
Query: 341 IGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGG 508
G S ++ AAA L G+ D G AV + G E +F F++ L +GG
Sbjct: 449 SGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGG 503
>09_01_0039 -
687711-688607,692336-693113,693414-693501,693761-694148,
694176-694401,694527-694680,695073-695145
Length = 867
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 565 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEK-AKNVEKLKAISFANQVRD 741
++ G+ RVR+VD + N+ DCF + +D + + K + V K+KA N R
Sbjct: 33 ELYGRSFGRVREVDVEADGCNRHDCFRILVDLPVAKPLKSKIGQKVNKVKATYQPNASRK 92
Query: 742 QDHHGRGKSILWTSTR 789
G ++ +S R
Sbjct: 93 LVFRSAGSAVSSSSRR 108
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 427 PAPRDHGSRKCFVPIIFPDTLDLFGGRDPSGFNHV 531
P P H + V FPD L L GG D GF+ +
Sbjct: 48 PPPPHHRRARSEVAFRFPDDLGLGGGADGGGFDEI 82
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +3
Query: 333 TTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTERPWVTKVLCSYHISRHP*PIWREGS 512
+T S + R+ + PP ++P++ T S RSS TKV + P P + +
Sbjct: 33 STPSKPTPRRKPKAPPVAAPMSPVTPSSVRRSSRLLETPTKVTSETPVKPTPTPKRKRAA 92
Query: 513 VRF*PRRHERGSPETNVPGQREARCPR 593
P+ + P+ QR+ + P+
Sbjct: 93 PSPSPKTPTQSEPKRQRQRQRQRQQPK 119
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 330 STTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTER-PWVTK 455
ST + SRR+ + P SS +AWT A R W+TK
Sbjct: 67 STYLASSSRRRRKRPPVTSSDVAWTVEDAAIGDELRRGTWMTK 109
>07_03_0105 + 13455906-13457198
Length = 430
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 441 VSRCWTAAPPNLSSRPTVRIAAA 373
V R W +A P+L+SRP +AAA
Sbjct: 37 VCRAWRSALPSLASRPLAPVAAA 59
>04_01_0418 -
5531652-5531827,5535111-5535195,5535250-5535402,
5535516-5535632,5536136-5536363
Length = 252
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 565 QVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVR 738
+VKG++D R QI + GDC+++S + + E +N L +S N+++
Sbjct: 125 KVKGEKDEVYRGASTQILGVAVGDCYIMSTSGNDAGMLLEGVRNNNGL--VSLNNELK 180
>01_07_0346 + 42889121-42890406,42896115-42896118
Length = 429
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 300 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 422
R+ T G +TTGSV SRR+ + + A T SS P
Sbjct: 125 RSATTKTSGAATTGSVSSRRRARRAAAVARHSAATPSSAPP 165
>01_06_0058 -
26056334-26056630,26057063-26057365,26057748-26057891,
26057947-26058702,26058844-26059088,26059177-26060079,
26060163-26060225,26060537-26061025,26061211-26061291,
26061801-26061956,26062371-26062416
Length = 1160
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 164 SGFCQCRQNSRCANMENTELRTNTRCSEGHRKFYKGDSYIILRTTSDSRNNL 319
+G CQC ++ +C N E T T S+G DSY + R +DS++ +
Sbjct: 774 NGRCQCMRDGKCRNNYLREFNTTT--SQGK------DSYPLYRRRNDSKSKV 817
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 279 TSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 434
TS G PR AT +T GS R+T P QS+P T+ +PR++T
Sbjct: 104 TSVQGAPRAPATA----ATVPQGGSPRRTV--PAQSAPGGPATAQSSPRAAT 149
>09_06_0175 + 21350528-21351136
Length = 202
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +1
Query: 343 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCF 462
R G ARRVRS R P R P RR PRD F
Sbjct: 80 RGGGGARRVRSPRTPSRPPNSTSARRR--RPRDAAGTSLF 117
>05_06_0149 - 25991761-25993181,25993246-25993324
Length = 499
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -2
Query: 465 NKALS*PMVSRCWTAAPPNLSSRPTVRIAAAPDSSCVDSRPIQ*WISHDRLLRLSEVVRK 286
N A+S ++R AA P++ T R+ APDS V + PI+ SHD L + V+R+
Sbjct: 71 NDAVSADAMARL-AAANPSI----TFRLLPAPDSPDVGAHPIK--RSHDTLKLANPVLRE 123
Query: 285 MMYESP 268
+ P
Sbjct: 124 FLRSLP 129
>04_04_0930 - 29480700-29480853,29481007-29483036
Length = 727
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 649 SLDNDIY---VFVGEKAKNVEKLKAISFANQVRDQDHHGRGKSILWTSTRAMWMFRN 810
SLD D+Y VFV E ++++ N+ ++ DH GR + + WM+R+
Sbjct: 520 SLDTDVYAFGVFVMEVLTGRSPSSSVTYHNRQQEHDHDGRRQPMYIVD----WMWRH 572
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 28.3 bits (60), Expect = 7.7
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Frame = +3
Query: 258 NSTKEIHTSFYGRPRTVATIYHGIST-TGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 434
NST++ YG G T T + GS S +PP S+ ++ AP+S
Sbjct: 548 NSTQDGSAPSYGAQGVAGQASPGQQTSTPAAGSHPGYSSQPPTSAASSYPVQGSAPQSGY 607
Query: 435 ERPWVTKVLCSYHISRHP*PIWREGSVRF*PRRHERGSPETNVPGQ 572
P Y P + +GS P + ++ P T+ GQ
Sbjct: 608 GAP---PPQTGYGTQPQPQGGYSQGSYGA-PPQGQKAPPNTSPYGQ 649
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,660,848
Number of Sequences: 37544
Number of extensions: 587454
Number of successful extensions: 2066
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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