Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20193
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 89 3e-18
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 66 2e-11
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 66 2e-11
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 31 0.75
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 0.75
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 31 0.99
Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 31 1.3
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 31 1.3
AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical ... 30 2.3
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 9.2
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 28 9.2
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 28 9.2
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 28 9.2
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 28 9.2
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 28 9.2
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +2
Query: 251 HRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQ 430
H FY GD+YI L D WD+H+W+G+ ++ DE G AAI TV +DD GG Q
Sbjct: 37 HGVFYIGDAYIALYQKYDG----CWDVHFWLGKNASTDEIGVAAIKTVEIDDSLGGIPTQ 92
Query: 431 HRETMGHESALFLSYFQTPLTYLEGG 508
HRE +ES LFLSYF + Y+ GG
Sbjct: 93 HREIQNYESPLFLSYFPDGIRYVSGG 118
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +1
Query: 475 FPDTLDLFGGRDPSGFNHVVTNAGAQK-RMFQVKGKRDVRVRQVDPQIASMNKGDCFVLS 651
FPD + G SG+ HV K +F KGKR+VR +V+ ++ S+N GD F+L
Sbjct: 108 FPDGIRYVSGGYESGYRHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILD 167
Query: 652 LDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGK-----SILWTSTRAMWMF 804
L D+YV++ ++ +E++K ++ A + D + G K + W + W +
Sbjct: 168 LGKDLYVWMPPESGRLERIKGMARAKNIADHERMGIPKVHILDDVEWDNDSTFWSY 223
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +2
Query: 251 HRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQ 430
H +FY D+Y++L+TT ++ L I YW+G ++ D+ +A+ VGL +
Sbjct: 528 HGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHASLDKGMCSAVHAVGLRNHLNATCRT 587
Query: 431 HRETMGHESALFLSYFQTPLTYLEGG 508
RE M E+ FL+ F + Y+EGG
Sbjct: 588 QREEMNDETEEFLTLFGEEIVYIEGG 613
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/86 (33%), Positives = 47/86 (54%)
Frame = +2
Query: 251 HRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQ 430
H +FY D+Y++L+TT ++ L I YW+G ++ D+ +A+ VGL +
Sbjct: 528 HGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHASLDKGMCSAVHAVGLRNHLNATCRT 587
Query: 431 HRETMGHESALFLSYFQTPLTYLEGG 508
RE M E+ FL+ F + Y+EGG
Sbjct: 588 QREEMNDETEEFLTLFGEEIVYIEGG 613
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 559 MFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKA 714
+ QV+G ++V VR V P ++S+++ CFV+ + + G + +EK KA
Sbjct: 221 LIQVRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKA 272
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 431 HRETMGHESALFLSYFQTPLTYLEGGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSI 607
H +T HES + +T LT + L+T R EC RSK + + AL+ +
Sbjct: 117 HSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVCELEIARKECDRSKRT-IQALETEV 174
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 431 HRETMGHESALFLSYFQTPLTYLEGGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSI 607
H +T HES + +T LT + L+T R EC RSK + + AL+ +
Sbjct: 139 HSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVCELEIARKECDRSKRT-IQALETEV 196
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 31.5 bits (68), Expect = 0.75
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 431 HRETMGHESALFLSYFQTPLTYLEGGIRPVLTTSSRTREPRNECSRSKGSEMSALDKSI 607
H +T HES + +T LT + L+T R EC RSK + + AL+ +
Sbjct: 141 HSKTAPHESDMIKKKLETQLTQFRSELTQGLSTVCELEIARKECDRSKRT-IQALETEV 198
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.5 bits (68), Expect = 0.75
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 258 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 419
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 91 SSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 150
Query: 420 PRSSTERP 443
+STE P
Sbjct: 151 ETTSTEAP 158
Score = 31.5 bits (68), Expect = 0.75
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 258 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 419
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 137 SSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 196
Query: 420 PRSSTERP 443
+STE P
Sbjct: 197 ETTSTEPP 204
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +3
Query: 258 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 419
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 804 SSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 863
Query: 420 PRSSTERP 443
+STE P
Sbjct: 864 ETTSTEPP 871
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +3
Query: 258 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 419
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 666 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 725
Query: 420 PRSSTERP 443
+STE P
Sbjct: 726 ETTSTEPP 733
Score = 28.7 bits (61), Expect = 5.3
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Frame = +3
Query: 84 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIENS 263
T+T+P S + A + P ++ T VQ I P + + +S
Sbjct: 705 TSTEPPSSSTSPVQTTTTTAPETTSTEPPSSS---TTPVQTTTIT--APETTSTEPPSSS 759
Query: 264 TKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGAPR 425
T + T+ P T +T S T + + TS EPP SS P+ TT +
Sbjct: 760 TTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTITAPET 819
Query: 426 SSTERP 443
+STE P
Sbjct: 820 TSTEPP 825
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 31.1 bits (67), Expect = 0.99
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 658 NDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKSILWTSTR 789
+D+Y+F + K+ + K F Q+R + H G G + W++TR
Sbjct: 142 DDVYIF--DYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTR 183
>Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical
protein W04G3.2 protein.
Length = 565
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 236 GYWFEVLYSPYLHTG-CSADIGKSRMDFGFVTGVFI 132
G W++V+YSP + TG CS K D G TG +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 288 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 431
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 288 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 431
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical
protein T12F5.1 protein.
Length = 249
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 84 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQK 248
T K QE+ GP+ D+ D AK ++ R G QNF+ I + +K
Sbjct: 171 TPEKGQEVEGPVEEFDDETNEDVAKAR-SYNPAARKLGGSSKSDQNFQKINLRKK 224
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
F46H5.4 protein.
Length = 2018
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 213 IQNFEPIPVAQKDIENSTKEIHTSF-YGRPRTVATIYHG-ISTTGSVG 350
+++F PI VA +DIE T+E+ + + P+ ++ G I TT + G
Sbjct: 1877 VKDFSPIEVAIEDIEKKTRELSAAAQHKNPKMLSMFIQGSIGTTVNQG 1924
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 92 GRRPCPDGSQENKKETRKNDLHP 24
GRR CPDGS E+K+ + P
Sbjct: 161 GRRNCPDGSDEHKEHGKCKQHQP 183
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 92 GRRPCPDGSQENKKETRKNDLHP 24
GRR CPDGS E+K+ + P
Sbjct: 161 GRRNCPDGSDEHKEHGKCKQHQP 183
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 248 GHRKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKF 412
G RK+ + + + R S++ +NL W +WI RE ++ S A+ + D ++
Sbjct: 345 GRRKWKR---FYLNRFASEAISNLHWRYSFWIDRECDKN-SLCTAVREINFDQRW 395
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 190 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 44
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 726 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 774
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 190 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 44
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 719 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 767
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-related
protein LIN-59 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 9.2
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +3
Query: 198 VQIWRIQN-FEPIPVAQKDIENSTKEIHTSFYGRPRTVATIYHGISTTGSVGSRRKTSQE 374
+QI + Q FE +P + N+ + T F P+ V + + S +
Sbjct: 1210 MQIGKTQRVFEKVPPKNRYPINTNSYVFTEFT-HPKKVVRDFRPYDPSNP-------SPK 1261
Query: 375 PPQSSPLAWTTSSGAPRSSTE-RPWV-TKVLCSYHISRHP*PIWREGSVR 518
PP++S + T+S P+SS++ P V TK L HI R + + GS R
Sbjct: 1262 PPKTSSIPSTSSIDPPQSSSDGLPEVDTKKLSKRHIQRVLKRLVKNGSRR 1311
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 27.9 bits (59), Expect = 9.2
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +3
Query: 198 VQIWRIQN-FEPIPVAQKDIENSTKEIHTSFYGRPRTVATIYHGISTTGSVGSRRKTSQE 374
+QI + Q FE +P + N+ + T F P+ V + + S +
Sbjct: 1210 MQIGKTQRVFEKVPPKNRYPINTNSYVFTEFT-HPKKVVRDFRPYDPSNP-------SPK 1261
Query: 375 PPQSSPLAWTTSSGAPRSSTE-RPWV-TKVLCSYHISRHP*PIWREGSVR 518
PP++S + T+S P+SS++ P V TK L HI R + + GS R
Sbjct: 1262 PPKTSSIPSTSSIDPPQSSSDGLPEVDTKKLSKRHIQRVLKRLVKNGSRR 1311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,154,907
Number of Sequences: 27780
Number of extensions: 463070
Number of successful extensions: 1500
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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