Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20187
(790 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023633-1|AAY85033.1| 112|Drosophila melanogaster IP05674p pro... 77 3e-14
AE014297-4223|AAF56781.1| 111|Drosophila melanogaster CG17856-P... 77 3e-14
AY113594-1|AAM29599.1| 111|Drosophila melanogaster RH44664p pro... 77 4e-14
AE014298-2348|AAF48576.1| 111|Drosophila melanogaster CG3560-PA... 77 4e-14
S68803-1|AAB29876.2| 540|Drosophila melanogaster prn protein. 31 2.4
S68798-1|AAB29874.1| 540|Drosophila melanogaster dGATAa protein. 31 2.4
AY095095-1|AAM11423.1| 486|Drosophila melanogaster SD02611p pro... 31 2.4
AE014297-2136|AAF55264.3| 488|Drosophila melanogaster CG3978-PB... 31 2.4
AE014297-2135|AAN13693.1| 540|Drosophila melanogaster CG3978-PA... 31 2.4
AE014297-2713|AAF55703.2| 1038|Drosophila melanogaster CG4583-PA... 29 9.6
AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-P... 29 9.6
>BT023633-1|AAY85033.1| 112|Drosophila melanogaster IP05674p
protein.
Length = 112
Score = 77.0 bits (181), Expect = 3e-14
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +2
Query: 254 RIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 406
RI+RA+ LSM KTILPKE+WTKYEED YL P + +V+KER ERE+W K +
Sbjct: 62 RILRALHLSMTKTILPKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 112
Score = 76.2 bits (179), Expect = 5e-14
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 120 LSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNF-VLYVPYSSPCKKQS 296
L KWAYN+SGFN+YGL RDDCL+E DV EA+RRLP + DERN+ +L + S K
Sbjct: 17 LGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTKTIL 76
Query: 297 YLKKSGQNMKKIPYT*PQLLSKLRKRGWRE 386
++ + + I Y P L ++R RE
Sbjct: 77 PKEQWTKYEEDIKYLEPYLNEVQKEREERE 106
>AE014297-4223|AAF56781.1| 111|Drosophila melanogaster CG17856-PA
protein.
Length = 111
Score = 77.0 bits (181), Expect = 3e-14
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +2
Query: 254 RIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 406
RI+RA+ LSM KTILPKE+WTKYEED YL P + +V+KER ERE+W K +
Sbjct: 61 RILRALHLSMTKTILPKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 111
Score = 76.2 bits (179), Expect = 5e-14
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 120 LSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNF-VLYVPYSSPCKKQS 296
L KWAYN+SGFN+YGL RDDCL+E DV EA+RRLP + DERN+ +L + S K
Sbjct: 16 LGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTKTIL 75
Query: 297 YLKKSGQNMKKIPYT*PQLLSKLRKRGWRE 386
++ + + I Y P L ++R RE
Sbjct: 76 PKEQWTKYEEDIKYLEPYLNEVQKEREERE 105
>AY113594-1|AAM29599.1| 111|Drosophila melanogaster RH44664p
protein.
Length = 111
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +2
Query: 254 RIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEK 400
RI+RA+ LSM KTILPKE+WTKYEED YL P +++V KER ERE WEK
Sbjct: 61 RIMRALHLSMTKTILPKEQWTKYEEDVKYLEPYLKEVVKEREEREDWEK 109
Score = 75.4 bits (177), Expect = 8e-14
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +3
Query: 117 SLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNF-VLYVPYSSPCKKQ 293
+L +WAYNLSGFN+YGL RDDCL+E DV EA+RRLP + DERN+ ++ + S K
Sbjct: 15 NLGRWAYNLSGFNQYGLHRDDCLYENEDVKEAVRRLPRKLYDERNYRIMRALHLSMTKTI 74
Query: 294 SYLKKSGQNMKKIPYT*PQLLSKLRKRGWRE 386
++ + + + Y P L +++R RE
Sbjct: 75 LPKEQWTKYEEDVKYLEPYLKEVVKEREERE 105
>AE014298-2348|AAF48576.1| 111|Drosophila melanogaster CG3560-PA
protein.
Length = 111
Score = 76.6 bits (180), Expect = 4e-14
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +2
Query: 254 RIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEK 400
RI+RA+ LSM KTILPKE+WTKYEED YL P +++V KER ERE WEK
Sbjct: 61 RIMRALHLSMTKTILPKEQWTKYEEDVKYLEPYLKEVVKEREEREDWEK 109
Score = 75.4 bits (177), Expect = 8e-14
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +3
Query: 117 SLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNF-VLYVPYSSPCKKQ 293
+L +WAYNLSGFN+YGL RDDCL+E DV EA+RRLP + DERN+ ++ + S K
Sbjct: 15 NLGRWAYNLSGFNQYGLHRDDCLYENEDVKEAVRRLPRKLYDERNYRIMRALHLSMTKTI 74
Query: 294 SYLKKSGQNMKKIPYT*PQLLSKLRKRGWRE 386
++ + + + Y P L +++R RE
Sbjct: 75 LPKEQWTKYEEDVKYLEPYLKEVVKEREERE 105
>S68803-1|AAB29876.2| 540|Drosophila melanogaster prn protein.
Length = 540
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 297 RIVFCMESCMARTIRSFSRQQHGMEVCGVLQLHQEFHASNHPV 169
R+ C +C RT + R G VC L+ + H N P+
Sbjct: 221 RMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPL 263
>S68798-1|AAB29874.1| 540|Drosophila melanogaster dGATAa protein.
Length = 540
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 297 RIVFCMESCMARTIRSFSRQQHGMEVCGVLQLHQEFHASNHPV 169
R+ C +C RT + R G VC L+ + H N P+
Sbjct: 221 RMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPL 263
>AY095095-1|AAM11423.1| 486|Drosophila melanogaster SD02611p
protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 297 RIVFCMESCMARTIRSFSRQQHGMEVCGVLQLHQEFHASNHPV 169
R+ C +C RT + R G VC L+ + H N P+
Sbjct: 169 RMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPL 211
>AE014297-2136|AAF55264.3| 488|Drosophila melanogaster CG3978-PB,
isoform B protein.
Length = 488
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 297 RIVFCMESCMARTIRSFSRQQHGMEVCGVLQLHQEFHASNHPV 169
R+ C +C RT + R G VC L+ + H N P+
Sbjct: 169 RMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPL 211
>AE014297-2135|AAN13693.1| 540|Drosophila melanogaster CG3978-PA,
isoform A protein.
Length = 540
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 297 RIVFCMESCMARTIRSFSRQQHGMEVCGVLQLHQEFHASNHPV 169
R+ C +C RT + R G VC L+ + H N P+
Sbjct: 221 RMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPL 263
>AE014297-2713|AAF55703.2| 1038|Drosophila melanogaster CG4583-PA
protein.
Length = 1038
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 234 VVDERNFVLYVPYSSPCKKQSYLKKSGQ--NMKKIPYT*PQLLS 359
+V E + VP+ P + + + GQ ++KK+PYT PQL++
Sbjct: 20 IVAEHQENVQVPHFLPDPRDGSIYQLGQMGSLKKLPYTIPQLVA 63
>AE014297-1133|AAF54518.1| 1436|Drosophila melanogaster CG11872-PA
protein.
Length = 1436
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = -1
Query: 271 YGTYNTKFLSSTTWDGSLRSASVTSGVSCKQSSRNKPY 158
Y TYN K SS T +GSL +A TSG S SS Y
Sbjct: 1283 YNTYNPKRRSSYTLNGSLPTA--TSGSSAAGSSHLDGY 1318
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,427,186
Number of Sequences: 53049
Number of extensions: 607671
Number of successful extensions: 1661
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -