Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20182
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1057 + 27248249-27249001 99 4e-21
03_02_0380 - 7945959-7946699 98 8e-21
02_01_0529 - 3846489-3847268 95 4e-20
09_04_0535 + 18397051-18397644 86 3e-17
08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150 79 3e-15
08_02_1128 + 24510735-24511055 58 8e-09
01_05_0464 - 22470963-22472291 54 2e-07
01_01_0018 + 139150-140415 52 5e-07
01_03_0204 + 13771346-13772680 52 7e-07
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 45 8e-05
05_05_0328 + 24130887-24130919,24132207-24132279,24133542-241336... 45 8e-05
04_04_1632 - 34926955-34927332 45 8e-05
01_01_0592 + 4414416-4415132 43 2e-04
10_02_0162 + 6054823-6055830 40 0.002
05_03_0410 + 13616708-13617691 40 0.002
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798 31 0.76
12_02_0831 + 23529021-23529162,23529383-23529435,23529727-235310... 29 4.1
07_03_1061 + 23651404-23651625,23651764-23652954 29 5.4
>06_03_1057 + 27248249-27249001
Length = 250
Score = 98.7 bits (235), Expect = 4e-21
Identities = 54/106 (50%), Positives = 68/106 (64%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQQFW + L DI++ DFK +LPLARIKKIMK DE+V+MISAEAPV+FAKA EIFI
Sbjct: 80 LQQFWAERLVDIEQTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFIL 137
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K AI ++D +DFL+DIVPR ++K
Sbjct: 138 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLK 183
>03_02_0380 - 7945959-7946699
Length = 246
Score = 97.9 bits (233), Expect = 8e-21
Identities = 52/106 (49%), Positives = 65/106 (61%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW ++ ++ ++ DFK LPLARIKKIMK DE+V+MISAEAPVLFAKA E+FI
Sbjct: 46 LQAFWAYQRQEAERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFIL 105
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K AI ++D FDFL+DIVPR E K
Sbjct: 106 ELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAK 151
>02_01_0529 - 3846489-3847268
Length = 259
Score = 95.5 bits (227), Expect = 4e-20
Identities = 51/106 (48%), Positives = 68/106 (64%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
L++FW +E+I++ DFK +LPLARIKKIMK DE+V+MISAEAPV+FAKA E+FI
Sbjct: 84 LREFWANQMEEIEQTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEVFIL 141
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K AI ++D +DFL+DIVPR E+K
Sbjct: 142 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMK 187
>09_04_0535 + 18397051-18397644
Length = 197
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/106 (45%), Positives = 64/106 (60%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW + +I+ DFK LPLARIKKIMK DE+V+MI+AEAPV+FA+A E+FI
Sbjct: 60 LQMFWAEQYREIEATT--DFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFIL 117
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K + AI +++ FDFL+DIVPR + K
Sbjct: 118 ELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDDAK 163
>08_01_0702 - 6205731-6206516,6207521-6207549,6208135-6208150
Length = 276
Score = 79.4 bits (187), Expect = 3e-15
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW + +++++ +FK LPLARIKKIMK DE+VKMI+ EAP LFAKA E+FI
Sbjct: 106 LQAFWADQMAEVEQMT--EFKLPNLPLARIKKIMKADEDVKMIAGEAPALFAKACEMFIL 163
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ + + + I K+D FDFL+DI+ ++K
Sbjct: 164 DMTLRSWQHTEEGRRRTLQRSDVEAVIKKTDIFDFLVDIITDDKMK 209
>08_02_1128 + 24510735-24511055
Length = 106
Score = 58.0 bits (134), Expect = 8e-09
Identities = 34/86 (39%), Positives = 47/86 (54%)
Frame = +1
Query: 427 MKLDEEVKMISAEAPVLFAKAAEIFIHG*RCEPGRIRRKIKGGLCSATT*RQAILKSDQF 606
MK DE+V+MI+AEAPV+FA+A E+FI + K + AI +++ F
Sbjct: 1 MKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVF 60
Query: 607 DFLIDIVPRHEVKPTKPRYDAARKAP 684
DFL+DIVPR E K + A P
Sbjct: 61 DFLVDIVPRDEAKDAEAAAAVAAGIP 86
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +3
Query: 489 C*DFYTRLTLRAWSHTEENKRRTLQRNDIA 578
C F LT R W+H EENKRRTLQ++DIA
Sbjct: 22 CEMFILELTHRGWAHAEENKRRTLQKSDIA 51
>01_05_0464 - 22470963-22472291
Length = 442
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/106 (26%), Positives = 54/106 (50%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
+ +FW ++I+ ++DF A+P+AR+KKI+ + M++ + P +K E+F+
Sbjct: 22 MDEFWRDRQKEIE--TTKDFSEHAIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQ 79
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ + T +AI ++ +DFL+DI+ H VK
Sbjct: 80 ELAVRAWASAQSHNRCIILDTDIAKAIASTESYDFLVDILHNHRVK 125
>01_01_0018 + 139150-140415
Length = 421
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/106 (26%), Positives = 52/106 (49%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
+ +FW ++I+ ++DF A+P+AR+KKI + M+S + P +K E+F+
Sbjct: 22 MDEFWRDRQKEIE--TTKDFSEHAIPMARLKKIASSQKGNMMMSFDMPAFLSKMCELFVQ 79
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ + T +AI ++ +DFL+DI+ H K
Sbjct: 80 ELAVRAWASAQSHNRCIILDTDIAEAIASTESYDFLVDILHNHREK 125
>01_03_0204 + 13771346-13772680
Length = 444
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/123 (21%), Positives = 57/123 (46%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
+ +FW ++I+ ++DF +P+AR+KKI+ + M++ + P +K E+F+
Sbjct: 22 MDEFWRDRQKEIEM--TKDFSEHMIPMARLKKIVSSQKGNMMMTFDMPAFLSKMCELFVQ 79
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVKPTKPRYDAARKAPS 687
+ + +A+ ++ +DFL+DI+ H VK + ++
Sbjct: 80 ELAARAWACAQSHNRCIILDMDIAEAVASTESYDFLVDILHNHSVKQKSTPCSSTKRCRL 139
Query: 688 TDQ 696
DQ
Sbjct: 140 VDQ 142
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 403 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHG*RCEPGRIRRKIKGGLCSATT*RQ 582
P ARIKKIM+ DE+V I+ PVL ++A E+F+ I + ++ +Q
Sbjct: 10 PAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRTYEITLQSGAKTLNSFHLKQ 69
Query: 583 AILKSDQFDFLIDIV 627
+ + FDFL ++V
Sbjct: 70 CVRRYSSFDFLTEVV 84
>05_05_0328 +
24130887-24130919,24132207-24132279,24133542-24133635,
24133924-24134037,24134121-24134169,24134364-24134873
Length = 290
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 403 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHG--*RCEPGRIRRKIKGGLCSATT* 576
P RIKKIM+ DE+V I+ PVL +KA E+F+ R ++R +K S++
Sbjct: 10 PAPRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCNRTYDITVQRGVK--TLSSSHL 67
Query: 577 RQAILKSDQFDFLIDIVPR 633
+Q I + +DFL D+V +
Sbjct: 68 KQCIHSYNVYDFLRDVVSK 86
>04_04_1632 - 34926955-34927332
Length = 125
Score = 44.8 bits (101), Expect = 8e-05
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Frame = +1
Query: 397 ALPLARIKKIMKL---DEEV-----------KMISAEAPVLFAKAAEIFIHG*RCEPGRI 534
ALPLARIKKIMK D V +MIS EAPV+F+KA E+FI
Sbjct: 23 ALPLARIKKIMKRSAGDSSVVDGGGGGGGGARMISGEAPVVFSKACELFIAELTRRAWAA 82
Query: 535 RRKIKGGLCSATT*RQAILKSDQFDFLIDIV 627
+ K A+ +D FDFL+D+V
Sbjct: 83 TLEGKRRTVHKEDVAAAVQNTDLFDFLVDVV 113
Score = 34.7 bits (76), Expect = 0.082
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 483 EGC*DFYTRLTLRAWSHTEENKRRTLQRNDIA 578
+ C F LT RAW+ T E KRRT+ + D+A
Sbjct: 66 KACELFIAELTRRAWAATLEGKRRTVHKEDVA 97
>01_01_0592 + 4414416-4415132
Length = 238
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Frame = +1
Query: 343 DKVLEDIQKVNSE----DFKTQ--ALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFI 504
D+ E +++V E D Q ALPL R+K+I+++D ++K ++ EA +L A A E+F+
Sbjct: 94 DEATEPMEQVEGEGEDGDAAAQRPALPLGRVKRIIRVDRDIKKVTNEAALLIAAATELFV 153
Query: 505 HG*RCEPGRIRRKIKGGLCSATT*RQAILK-SDQFDFLIDIVPRHE 639
R + A R A + DFL+D +P E
Sbjct: 154 GSLAAGAHRAASRRGRRAVRAVHVRAAAREHRPTADFLLDCLPAAE 199
>10_02_0162 + 6054823-6055830
Length = 335
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/104 (24%), Positives = 47/104 (45%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
+++FW E I++ S + LP++R+K I+ E M+SA+ P K E+F+
Sbjct: 31 MEKFWRMSQEQIEE--SAGNEELILPISRVKNIIHAKEGGMMLSADTPAFVTKLCELFVQ 88
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHE 639
+ T +AI ++ + FL ++V H+
Sbjct: 89 ELILRAWVCANSHNREIILGTDIAEAITTTESYHFLANVVHGHQ 132
>05_03_0410 + 13616708-13617691
Length = 327
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
+++FW + E I+ S LP+ +K +++ + M+SA+ P K E+F+
Sbjct: 31 MEEFWRRSQEQIEA--SAGNHEHILPIDCVKNVIRPKNDAMMLSADTPTFVTKLCELFVQ 88
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHE-VKPTKPRYD-AARKA 681
+ T +AI ++ + FL +++ H+ + T P D +ARK
Sbjct: 89 ELTLRAWVCANSHNRDIILGTDIAEAITTTESYHFLGNVLRSHKALGSTAPDIDTSARKH 148
Query: 682 PSTDQ 696
DQ
Sbjct: 149 IKLDQ 153
>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
Length = 289
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 382 DFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFI 504
D + P+AR+++IM+ ++ S EA L KA EIF+
Sbjct: 200 DHGAGSFPMARVRQIMRAEDATIRPSNEAVFLINKATEIFL 240
>12_02_0831 +
23529021-23529162,23529383-23529435,23529727-23531074,
23531154-23531324,23531672-23532531
Length = 857
Score = 29.1 bits (62), Expect = 4.1
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Frame = +3
Query: 360 HTES*FRRLQDPSFAVGSHQEDHETRRGGEDDISRGTGLIREGC*DFYTRLTLRAWSHTE 539
H E + L DPS V +D E G +++ R G R + + +E
Sbjct: 222 HRELFLKILHDPSLLVPLENQDQEASSSGAVPLNKSDSFPRPGG-SSGKRNPIFDRNDSE 280
Query: 540 ENKRRTLQ------RNDIATGYIEIGSVRFPDRHSAAA*SQADETALRRRQKSPKHGSVL 701
N+R +Q ++DI T + IG+ R PD ++ S + +LR+ + V+
Sbjct: 281 NNRRSEIQKSPSRLKSDIETAKV-IGT-RMPDGVEGSSVSLTESKSLRKSGTTSNRFKVI 338
Query: 702 -PPVSASIRRPTEQFA 746
+ A+++ ++ A
Sbjct: 339 RKKIKAAVKENRKELA 354
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 523 PGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVKPTKPR 660
PGR R+ GGL S T + +QF + D+V ++ +PR
Sbjct: 102 PGRTRKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPR 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,647,479
Number of Sequences: 37544
Number of extensions: 343946
Number of successful extensions: 942
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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