Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20182
(765 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ... 99 4e-21
At3g48590.1 68416.m05305 CCAAT-box binding transcription factor ... 97 9e-21
At1g54830.3 68414.m06253 CCAAT-box binding transcription factor ... 95 3e-20
At1g54830.2 68414.m06252 CCAAT-box binding transcription factor ... 95 3e-20
At1g54830.1 68414.m06251 CCAAT-box binding transcription factor ... 95 3e-20
At1g56170.1 68414.m06454 transcription factor, putative similar ... 94 8e-20
At1g08970.4 68414.m01000 CCAAT-box binding transcription factor ... 94 1e-19
At1g08970.3 68414.m00999 CCAAT-box binding transcription factor ... 94 1e-19
At1g08970.2 68414.m00998 CCAAT-box binding transcription factor ... 94 1e-19
At1g08970.1 68414.m00997 CCAAT-box binding transcription factor ... 94 1e-19
At5g50480.1 68418.m06252 CCAAT-box binding transcription factor ... 77 2e-14
At5g27910.1 68418.m03352 CCAAT-box binding transcription factor ... 63 2e-10
At5g50490.1 68418.m06254 CCAAT-box binding transcription factor ... 57 1e-08
At5g50470.1 68418.m06250 CCAAT-box binding transcription factor ... 57 1e-08
At5g38140.1 68418.m04596 histone-like transcription factor (CBF/... 55 6e-08
At3g12480.1 68416.m01553 transcription factor, putative 43 3e-04
At5g43250.1 68418.m05285 transcription factor, putative similar ... 42 3e-04
At4g04545.1 68417.m00665 Ulp1 protease family protein contains P... 29 3.4
At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein... 28 7.8
At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein... 28 7.8
>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
Hap5a, putative
Length = 250
Score = 98.7 bits (235), Expect = 4e-21
Identities = 54/106 (50%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW ++I++VN DFK LPLARIKKIMK DE+V+MISAEAP+LFAKA E+FI
Sbjct: 57 LQMFWTYQRQEIEQVN--DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFIL 114
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K AI ++D FDFL+DIVPR E+K
Sbjct: 115 ELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIK 160
>At3g48590.1 68416.m05305 CCAAT-box binding transcription factor
Hap5a, putative
Length = 234
Score = 97.5 bits (232), Expect = 9e-21
Identities = 54/106 (50%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW ++I++VN DFK LPLARIKKIMK DE+V+MISAEAP+LFAKA E+FI
Sbjct: 44 LQLFWTYQRQEIEQVN--DFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFIL 101
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K AI ++D FDFL+DIVPR E+K
Sbjct: 102 ELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 147
>At1g54830.3 68414.m06253 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 95.5 bits (227), Expect = 3e-20
Identities = 55/137 (40%), Positives = 76/137 (55%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 49 LQSFWETQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 106
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVKPTKPRYDAARKAPS 687
+ K A+ ++D FDFL+DIVPR +++ A A +
Sbjct: 107 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 166
Query: 688 TDQYYLQLAPASGGLQN 738
Y L P + + N
Sbjct: 167 AGYPYGYLPPGTAPIGN 183
>At1g54830.2 68414.m06252 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 95.5 bits (227), Expect = 3e-20
Identities = 55/137 (40%), Positives = 76/137 (55%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 49 LQSFWETQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 106
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVKPTKPRYDAARKAPS 687
+ K A+ ++D FDFL+DIVPR +++ A A +
Sbjct: 107 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 166
Query: 688 TDQYYLQLAPASGGLQN 738
Y L P + + N
Sbjct: 167 AGYPYGYLPPGTAPIGN 183
>At1g54830.1 68414.m06251 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 95.5 bits (227), Expect = 3e-20
Identities = 55/137 (40%), Positives = 76/137 (55%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 49 LQSFWETQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 106
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVKPTKPRYDAARKAPS 687
+ K A+ ++D FDFL+DIVPR +++ A A +
Sbjct: 107 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATA 166
Query: 688 TDQYYLQLAPASGGLQN 738
Y L P + + N
Sbjct: 167 AGYPYGYLPPGTAPIGN 183
>At1g56170.1 68414.m06454 transcription factor, putative similar to
Transcription factor GB:CAA74053 GI:2398533 from
[Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 199
Score = 94.3 bits (224), Expect = 8e-20
Identities = 51/106 (48%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW +++I+ ++ DFK LPLARIKKIMK DE+V+MISAEAPV+FAKA E+FI
Sbjct: 55 LQMFWANQMQEIE--HTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFIL 112
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K AI ++D FDFL+DI+PR E+K
Sbjct: 113 ELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELK 158
>At1g08970.4 68414.m01000 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/106 (46%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 59 LQAFWENQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 116
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K A+ ++D FDFL+DIVPR +++
Sbjct: 117 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLR 162
>At1g08970.3 68414.m00999 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/106 (46%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 59 LQAFWENQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 116
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K A+ ++D FDFL+DIVPR +++
Sbjct: 117 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLR 162
>At1g08970.2 68414.m00998 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/106 (46%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 59 LQAFWENQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 116
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K A+ ++D FDFL+DIVPR +++
Sbjct: 117 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLR 162
>At1g08970.1 68414.m00997 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/106 (46%), Positives = 67/106 (63%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
LQ FW+ ++I+K DFK +LPLARIKKIMK DE+V+MISAEAPV+FA+A E+FI
Sbjct: 59 LQAFWENQFKEIEKTT--DFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFIL 116
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVK 645
+ K A+ ++D FDFL+DIVPR +++
Sbjct: 117 ELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLR 162
>At5g50480.1 68418.m06252 CCAAT-box binding transcription factor
Hap5a, putative GI:14577940 CCAAT-binding protein
subunit HAP5 {Hypocrea jecorina} similar to
Transcription factor GB:CAA74053 GI:2398533 from
[Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 202
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/104 (40%), Positives = 60/104 (57%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
L+ +W + +E + DFK + LPLARIKKIMK D +V M+SAEAP++FAKA E+FI
Sbjct: 36 LRNYWIEQMETVS-----DFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIV 90
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHE 639
+ K + A+ S +DFL+D+VP+ E
Sbjct: 91 DLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDE 134
>At5g27910.1 68418.m03352 CCAAT-box binding transcription factor
Hap5a, putative
Length = 187
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/98 (37%), Positives = 54/98 (55%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
L+ FW K +E + DFK LP+ RIKKIMK D +V MI++EAP+L +KA E+FI
Sbjct: 18 LKSFWSKEME-----GNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIM 72
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLID 621
++ K + A+ ++ FDFL+D
Sbjct: 73 DLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
>At5g50490.1 68418.m06254 CCAAT-box binding transcription factor
Hap5a, putative
Length = 186
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/107 (33%), Positives = 56/107 (52%)
Frame = +1
Query: 328 LQQFWDKVLEDIQKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIH 507
L+ FW K +E V + +F P++RIK+IMK D +V MI+AEAP L +KA E+F+
Sbjct: 18 LKSFWSKGMEGDLNVKNHEF-----PISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVM 72
Query: 508 G*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPRHEVKP 648
++ + + ++ FDFL D VP+ E +P
Sbjct: 73 DLTMRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKDEGEP 119
Score = 34.3 bits (75), Expect = 0.090
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 474 LIREGC*DFYTRLTLRAWSHTEENKRRTLQRNDI 575
L+ + C F LT+R+W H +E+ R T++++D+
Sbjct: 62 LLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDV 95
>At5g50470.1 68418.m06250 CCAAT-box binding transcription factor
Hap5a, putative contains similarity to GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
Length = 212
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Frame = +1
Query: 364 QKVNSEDFKTQALPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHG-------*RCE 522
Q N+ D K A PL RIKKIMK + EV M++AEAPVL +KA E+ I E
Sbjct: 52 QMGNATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMRSWLHTVE 111
Query: 523 PGRIRRKIKGGLCSATT*RQAILKSDQFDFLIDIVPR 633
GR K + + + A +S +F FL D+VPR
Sbjct: 112 GGRQTLK-RSDTLTRSDISAATTRSFKFTFLGDVVPR 147
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 474 LIREGC*DFYTRLTLRAWSHTEENKRRTLQRNDIAT 581
LI + C LT+R+W HT E R+TL+R+D T
Sbjct: 89 LISKACEMLILDLTMRSWLHTVEGGRQTLKRSDTLT 124
>At5g38140.1 68418.m04596 histone-like transcription factor
(CBF/NF-Y) family protein similar to CCAAT-binding
transcription factor subunit AAB-1 (GI:2583171)
[Neurospora crassa]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 195
Score = 54.8 bits (126), Expect = 6e-08
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Frame = +1
Query: 346 KVLEDIQKVNSEDFKTQA-LPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHG*RCE 522
KV + Q+ +F Q LPL+R++KI+K D EVK IS + P LF+KA E FI
Sbjct: 49 KVFWNNQREQLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFI-----L 103
Query: 523 PGRIRRKIKGGLCSATT*R-----QAILKSDQFDFLIDIVP 630
+R + C+ T R QA+ S +DFLID VP
Sbjct: 104 EVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVP 144
>At3g12480.1 68416.m01553 transcription factor, putative
Length = 293
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +1
Query: 403 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHG*RCEPGRIRRKIKGGLCSATT*RQ 582
P ARIKKIM+ DE+V I+ PVL +K+ E+F+ I + S+ +
Sbjct: 10 PAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLKH 69
Query: 583 AILKSDQFDFLIDIVPR 633
+ + + FDFL ++V +
Sbjct: 70 CVERYNVFDFLREVVSK 86
>At5g43250.1 68418.m05285 transcription factor, putative similar to
heme activated protein GI:6289057 from (Arabidopsis
thaliana) GI:14577940 CCAAT-binding protein subunit HAP5
{Hypocrea jecorina} similar to Transcription factor
GB:CAA74053 GI:2398533 from [Arabidopsis thaliana]
similarity to transcription factor Hap5a similar to
transcription factor Hap5a [Arabidopsis
thaliana](GI:6523090)
Length = 130
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 403 PLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHG*RCEPGRIRRKIKGGLCSATT*RQ 582
P+ R+KKIMKLD+++ I++EA + + E+F+H + + + K + R
Sbjct: 13 PIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNLDHLRI 72
Query: 583 AILK-SDQFDFLIDI--VPRHEVKPTKPRYDAARKAP 684
A+ + DFL+D +P VK TK D AP
Sbjct: 73 AVKRHQPTSDFLLDSLPLPAQPVKHTKSVSDKKIPAP 109
>At4g04545.1 68417.m00665 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 882
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 648 RLDFMPRHYVDQEIELIRFQYSLSLCRCAAESAFYFP 538
R DF+P ++ + +R QY+ C + +SAFYFP
Sbjct: 695 RFDFLPSRFLSE----LRRQYN-KFCAASDKSAFYFP 726
>At3g07810.2 68416.m00956 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 495
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 430 KLDEEVKMISAEAPVLFAKAAEIFIHG*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFD 609
+L E K + + + ++ I G PGR R+ GGL S+ T +QF
Sbjct: 73 RLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFG 132
Query: 610 FLIDIVPRHEVKPTKPR 660
D+V ++ +PR
Sbjct: 133 TTTDVVVMYDHNTQRPR 149
>At3g07810.1 68416.m00955 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative contains Pfam profile:
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP
domain)
Length = 494
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 430 KLDEEVKMISAEAPVLFAKAAEIFIHG*RCEPGRIRRKIKGGLCSATT*RQAILKSDQFD 609
+L E K + + + ++ I G PGR R+ GGL S+ T +QF
Sbjct: 73 RLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQFG 132
Query: 610 FLIDIVPRHEVKPTKPR 660
D+V ++ +PR
Sbjct: 133 TTTDVVVMYDHNTQRPR 149
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,633,777
Number of Sequences: 28952
Number of extensions: 264641
Number of successful extensions: 712
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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