Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20180
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 76 3e-14
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 76 3e-14
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 67 2e-11
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 66 2e-11
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 52 5e-07
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 52 5e-07
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 42 4e-04
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 0.71
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 29 2.9
U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled re... 29 2.9
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 29 2.9
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 29 2.9
U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor staphylo... 29 3.8
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 29 5.0
U22831-9|AAN63388.1| 412|Caenorhabditis elegans Hypothetical pr... 28 8.8
U22831-8|AAK20070.2| 545|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 8.8
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +3
Query: 276 KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEV 455
+G FKF++G EVI GWD GV+ M VG K K+ + YG +G PP IP N+TLVFEV
Sbjct: 43 RGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEV 102
Query: 456 ELKNV 470
EL V
Sbjct: 103 ELLGV 107
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/65 (53%), Positives = 43/65 (66%)
Frame = +3
Query: 276 KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEV 455
+G FKF++G EVI GWD GV+ M VG K K+ + YG +G PP IP N+TLVFEV
Sbjct: 43 RGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEV 102
Query: 456 ELKNV 470
EL V
Sbjct: 103 ELLGV 107
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 66.9 bits (156), Expect = 2e-11
Identities = 30/61 (49%), Positives = 38/61 (62%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
F F LG VI GWD G+ M VG +R + PP + YG +G+PP IP NS L F+VEL
Sbjct: 72 FTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMK 131
Query: 468 V 470
+
Sbjct: 132 I 132
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
F F++G+ +VI G D+ + GM G KRK++ PP +AYG G PP IP NS L F++ L+
Sbjct: 193 FIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEK 252
Query: 468 V 470
+
Sbjct: 253 L 253
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
+ F LG EVI G ++ + GM VG +RK+I PP + G V TL + VELK+
Sbjct: 74 YTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDGD-EVEGKGETLYYFVELKS 132
Query: 468 V 470
+
Sbjct: 133 I 133
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +3
Query: 276 KGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEV 455
+G F F LG VI GWD+GV+ M G + YG GSPP IP +TL+FEV
Sbjct: 56 RGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEV 115
Query: 456 EL 461
EL
Sbjct: 116 EL 117
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
F FRL +EVI G D+ + GM G +R+++ P YG++GSPP IP + L FE+ L+
Sbjct: 193 FVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEK 252
Query: 468 V 470
+
Sbjct: 253 L 253
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPP--GMAYGAKGSP 416
+ F LG +VI G D + GM +G RK++ PP G A + G P
Sbjct: 78 YTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPPKLGFAKDSTGQP 122
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
F F+L EVI G D+ ++GM G +R+++ P YG G P IP + L F++ L+
Sbjct: 198 FIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEK 257
Query: 468 V 470
+
Sbjct: 258 L 258
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 461
+ F LG +VI G + ++GM G KRK++ P + +G KG I + TL + V+L
Sbjct: 76 YTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 134
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
F F+L EVI G D+ ++GM G +R+++ P YG G P IP + L F++ L+
Sbjct: 234 FIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEK 293
Query: 468 V 470
+
Sbjct: 294 L 294
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKG-SPPVIPPNSTLVFEVEL 461
+ F LG +VI G + ++GM G KRK++ P + +G KG I + TL + V+L
Sbjct: 112 YTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQL 170
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 288 FKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIP 428
FKF++G EVI GWD GV+ M V K K+ P + P IP
Sbjct: 243 FKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +3
Query: 294 FRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKN 467
F++G EVI G D+G+ MKVG YG G +IP N++L +V L N
Sbjct: 131 FKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRLFN 188
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 463 FNSTSNTKVELGGITGGEPFAPYAMPGGQIIFLLPPTFIPE----TPTSQPLMTSFAP 302
F + + T + G GG AP A PG + P +FIP P QP SF P
Sbjct: 187 FQAGAPTSQNVQGYPGGPSSAPSAYPGAPQVPQAPNSFIPPGTGGFPPGQPTAGSFPP 244
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 252 QKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYG 401
Q D C P ++ K+ I WD G K+KI PPGMA G
Sbjct: 17 QAQEDPCASAPSEAAKIMCKQ-IHRWDDGARA--ASKKKKIALPPGMAKG 63
>U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled
related protein 1,isoform b protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 327 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPP 419
W +G++GM G ++ PP G PP
Sbjct: 372 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 402
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 327 WDVGVSGMKVGGKRKIICPPGMAYGAKGSPP 419
W +G++GM G ++ PP G PP
Sbjct: 504 WTIGMNGMSAGNGSSVMLPPPHLPGGMAGPP 534
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 252 QKMFDNCLKGPGFKFRLGAKEVISGWDVGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPP 431
+K++ GP +LG ++ G D G+ GM RK+ P M+ +K P
Sbjct: 108 KKVYQTYGTGP-VTIQLGTGMIMPGLDKGLKGMCAEELRKVRVPYRMSRKSKSKVWKNIP 166
Query: 432 N--STLVFEVELKNVK 473
N + L+F +E+ +K
Sbjct: 167 NDENWLIFNIEMVEIK 182
>U40029-11|AAA81130.1| 914|Caenorhabditis elegans Tudor
staphylococcal nuclease homologprotein 1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 607 YNFVLLSVTNEIQVAISTSDWQTYMFHSYNGNQ*SNYLLLKTSVHLTFFNSTSNTKVELG 428
YN L + NE V +++ + Y+F + S Y + TS ++T + + N KV++G
Sbjct: 805 YNLALAKLPNEDYVQLTSDAFAQYLFGHSSVFINSEY-KVGTSEYVTVYYDSGNKKVDIG 863
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 148 LSGGVQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNKKCLTTASRDLDSSSV 300
++G ++ GNGP+A K V+ E +++N+ A+ D D++ V
Sbjct: 439 MNGNSSMQAFGSGNGPIAADTKAVLNLMENGVQKNRTIHGMAAADGDNTHV 489
>U22831-9|AAN63388.1| 412|Caenorhabditis elegans Hypothetical
protein F47D12.9b protein.
Length = 412
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 608 KKNMINNFFSFDGHITYLSFRD 673
K+N++N+ FS DG++ Y+ R+
Sbjct: 241 KRNVLNHCFSADGNLVYMGLRN 262
>U22831-8|AAK20070.2| 545|Caenorhabditis elegans Hypothetical
protein F47D12.9a protein.
Length = 545
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 608 KKNMINNFFSFDGHITYLSFRD 673
K+N++N+ FS DG++ Y+ R+
Sbjct: 374 KRNVLNHCFSADGNLVYMGLRN 395
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -1
Query: 403 APYAMPGGQIIFLLP---PTFIPETPTSQPLMTSFAP 302
AP M G +IF++P P+ +P TP + ++F P
Sbjct: 780 APPVMVTGPLIFIIPTVIPSTMPTTPEPPTISSTFTP 816
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,944,076
Number of Sequences: 27780
Number of extensions: 353783
Number of successful extensions: 828
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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