Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20178
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 108 1e-22
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 95 1e-18
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 95 2e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 94 3e-18
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 93 9e-18
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 91 2e-17
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 91 2e-17
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 91 3e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 91 3e-17
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 90 5e-17
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 89 1e-16
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 88 2e-16
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 87 6e-16
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 86 1e-15
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 85 1e-15
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 85 2e-15
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 81 3e-14
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 79 1e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 78 2e-13
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 76 8e-13
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 76 1e-12
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 76 1e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 74 4e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 74 4e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 73 1e-11
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 72 2e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 71 4e-11
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 69 1e-10
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 68 2e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 68 2e-10
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 68 2e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 67 5e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 66 6e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 64 3e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 64 3e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 64 3e-09
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 64 3e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 64 3e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 62 1e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 62 1e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 60 4e-08
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 58 3e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 57 4e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 57 4e-07
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 57 4e-07
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 57 5e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 56 7e-07
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 56 7e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 1e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 56 1e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 55 2e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 54 3e-06
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 53 6e-06
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 52 1e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 1e-05
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 52 2e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 52 2e-05
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 51 3e-05
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 51 3e-05
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 50 6e-05
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 50 8e-05
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 49 1e-04
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 49 1e-04
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 49 1e-04
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 49 1e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 48 2e-04
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 48 2e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 48 2e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 47 4e-04
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 47 6e-04
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 46 7e-04
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 46 7e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 46 7e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 46 7e-04
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 46 0.001
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 45 0.002
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 45 0.002
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 45 0.002
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 44 0.005
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 43 0.007
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 43 0.009
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.012
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 42 0.016
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 42 0.016
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 40 0.049
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 40 0.064
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 39 0.11
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 39 0.11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 38 0.20
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 38 0.20
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 38 0.26
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 38 0.34
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 36 1.0
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 36 1.4
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 34 3.2
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 34 4.2
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 33 5.6
UniRef50_Q7RMW2 Cluster: Phosphatase-related; n=2; Plasmodium (V... 33 7.4
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 33 9.7
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 33 9.7
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 108 bits (260), Expect = 1e-22
Identities = 53/74 (71%), Positives = 58/74 (78%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*FYQD 688
TAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP+++F F QD
Sbjct: 188 TAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQD 247
Query: 689 LV*FLILFHKKEEK 730
LV F +LF KK EK
Sbjct: 248 LVSFHMLFPKKVEK 261
Score = 99 bits (238), Expect = 6e-20
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G++GTSL LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL
Sbjct: 23 AGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPL 82
Query: 196 ILGAPDIAFPRINNIRF 246
+LGAPD+AFPR+NN+ F
Sbjct: 83 MLGAPDMAFPRMNNMSF 99
Score = 90.2 bits (214), Expect = 5e-17
Identities = 48/72 (66%), Positives = 49/72 (68%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 471 FDQLPLFV*AVG 506
FDQ+PLFV AVG
Sbjct: 175 FDQMPLFVWAVG 186
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 95.5 bits (227), Expect = 1e-18
Identities = 51/83 (61%), Positives = 58/83 (69%)
Frame = -2
Query: 266 KGGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 87
K GG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 86 PINDPGFPNSARIKSLKDVPIIP 18
PI PG PNSARIKSL DVP +P
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMP 207
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1
Query: 642 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVS 505
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AVS
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVS 45
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/83 (48%), Positives = 46/83 (55%)
Frame = -3
Query: 502 TAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG* 323
T TN G S I +R I+E PAKC+EKI STD P CAI SGG
Sbjct: 47 TDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGY 106
Query: 322 TVHPVPAPFSTILLEINNIREGG 254
TVHPVP P STI L + ++EGG
Sbjct: 107 TVHPVPTPLSTIPLNKSKVKEGG 129
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/75 (61%), Positives = 53/75 (70%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++GTSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+L
Sbjct: 1 MVGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLML 60
Query: 202 GAPDIAFPRINNIRF 246
GAPD+AFPR+NN+ F
Sbjct: 61 GAPDMAFPRMNNMSF 75
Score = 89.8 bits (213), Expect = 6e-17
Identities = 47/72 (65%), Positives = 49/72 (68%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 471 FDQLPLFV*AVG 506
FDQ+PLF+ AVG
Sbjct: 151 FDQMPLFIWAVG 162
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEV
Sbjct: 176 AGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEV 216
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/77 (58%), Positives = 55/77 (71%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G+IGT+L LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 27 AGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPL 86
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NN+ F
Sbjct: 87 MIGAPDMAFPRMNNMSF 103
Score = 83.0 bits (196), Expect = 7e-15
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEV
Sbjct: 204 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEV 244
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 471 FDQLPLFV*AV 503
Q PLFV +V
Sbjct: 179 QYQTPLFVWSV 189
Score = 37.9 bits (84), Expect = 0.26
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFG+ISH+++ GKK
Sbjct: 245 YILILPGFGMISHVVTYYAGKK 266
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 92.7 bits (220), Expect = 9e-18
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
SG+IGT+L LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL
Sbjct: 9 SGLIGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPL 68
Query: 196 ILGAPDIAFPRINNIRF 246
+LGAPD+AFPR+NN+ F
Sbjct: 69 MLGAPDMAFPRLNNMSF 85
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +2
Query: 497 SCRDTAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 643
S + TA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 26 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPL 85
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NN+ F
Sbjct: 86 MIGAPDMAFPRMNNMSF 102
Score = 83.0 bits (196), Expect = 7e-15
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEV
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEV 243
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/71 (52%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 471 FDQLPLFV*AV 503
Q PLFV +V
Sbjct: 178 QYQTPLFVWSV 188
Score = 37.9 bits (84), Expect = 0.26
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFG+ISH+++ GKK
Sbjct: 244 YILILPGFGMISHVVTYYAGKK 265
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 26 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPL 85
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NN+ F
Sbjct: 86 MIGAPDMAFPRMNNMSF 102
Score = 83.0 bits (196), Expect = 7e-15
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEV
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEV 243
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/71 (54%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 471 FDQLPLFV*AV 503
Q PLFV AV
Sbjct: 178 QYQTPLFVWAV 188
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFGIISH+++ GKK
Sbjct: 244 YILILPGFGIISHVVAYYAGKK 265
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL
Sbjct: 15 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPL 74
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NN+ F
Sbjct: 75 MIGAPDMAFPRMNNMSF 91
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/71 (54%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAIS 166
Query: 471 FDQLPLFV*AV 503
Q PLFV AV
Sbjct: 167 QYQTPLFVWAV 177
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDP 604
A IT+LLTDRNLNT+FFDP
Sbjct: 192 AAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
SG++GTSL L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL
Sbjct: 10 SGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPL 69
Query: 196 ILGAPDIAFPRINNIRF 246
+LGAPD+AFPR+NN+ F
Sbjct: 70 MLGAPDMAFPRMNNMSF 86
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 357 GRSVDLAIFSLHLAGISS 410
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 90.2 bits (214), Expect = 5e-17
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G++GT+L LLIRAELG PG+L+G+D IYN IVTAHA N LVPL
Sbjct: 26 AGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPL 85
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NN+ F
Sbjct: 86 MIGAPDMAFPRMNNMSF 102
Score = 83.0 bits (196), Expect = 7e-15
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEV
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEV 243
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/71 (50%), Positives = 41/71 (57%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMT 177
Query: 471 FDQLPLFV*AV 503
Q PLFV +V
Sbjct: 178 QYQTPLFVWSV 188
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFG+ISHI++ GKK
Sbjct: 244 YILILPGFGMISHIVTYYSGKK 265
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 89.0 bits (211), Expect = 1e-16
Identities = 45/77 (58%), Positives = 55/77 (71%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
+G+IGT+L LLIRAELG PG+L+GDDQ N IVTAHA N LVPL
Sbjct: 27 AGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPL 86
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NN+ F
Sbjct: 87 MIGAPDMAFPRMNNMSF 103
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 87.8 bits (208), Expect = 2e-16
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEV
Sbjct: 194 TAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEV 246
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+G++GT +LIR EL PG I G+ Q+YN ++TAHA N V
Sbjct: 27 AGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFV 86
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++GAPD+AFPR+NNI F
Sbjct: 87 PILIGAPDMAFPRLNNISF 105
Score = 63.3 bits (147), Expect = 6e-09
Identities = 34/71 (47%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS +
Sbjct: 121 VEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMT 180
Query: 471 FDQLPLFV*AV 503
+LPLFV +V
Sbjct: 181 MHRLPLFVWSV 191
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKKNF 738
YILILPGFGIISHI+S GK F
Sbjct: 247 YILILPGFGIISHIVSTFSGKPVF 270
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 86.6 bits (205), Expect = 6e-16
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*FYQDL-V*FLILFHKK 721
AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEV + ++F++
Sbjct: 187 AGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNES 246
Query: 722 EEKRTF 739
+K TF
Sbjct: 247 GKKETF 252
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
SG++G S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL
Sbjct: 10 SGMLGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPL 69
Query: 196 ILGAPDIAFPRINNIRF 246
+LG+PD++FPR+NN+ F
Sbjct: 70 MLGSPDMSFPRMNNMSF 86
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +3
Query: 300 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
SG IGT+ +LIR EL +PGS++GDD +YN IVTAHA N VPL
Sbjct: 27 SGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPL 86
Query: 196 ILGAPDIAFPRINNIRF 246
++GAPD+AFPR+NNI F
Sbjct: 87 MIGAPDMAFPRLNNISF 103
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 655
AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 204 AGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/71 (50%), Positives = 43/71 (60%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 471 FDQLPLFV*AV 503
++PLFV +V
Sbjct: 179 MSRIPLFVWSV 189
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 85.4 bits (202), Expect = 1e-15
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEV
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEV 243
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++GAPD+AFPR+NNI F
Sbjct: 84 PVMIGAPDMAFPRLNNISF 102
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/71 (52%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 471 FDQLPLFV*AV 503
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
Score = 36.7 bits (81), Expect = 0.60
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKKNF 738
YILI+PGFG++SHI+S GK F
Sbjct: 244 YILIIPGFGMVSHIVSAFSGKPVF 267
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/53 (73%), Positives = 41/53 (77%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEV
Sbjct: 199 TAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEV 251
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG++G + +LIR EL P + L+G+ QIYN ++TAHA N LV
Sbjct: 32 SGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLV 91
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++G+PD+AFPR+NNI F
Sbjct: 92 PIMIGSPDMAFPRLNNISF 110
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/68 (48%), Positives = 39/68 (57%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS S
Sbjct: 126 VEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQS 185
Query: 471 FDQLPLFV 494
++PLFV
Sbjct: 186 MYRIPLFV 193
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 667 YILILPGFGIISHIIS 714
YILILPGFG+ISHI+S
Sbjct: 252 YILILPGFGMISHIVS 267
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEV
Sbjct: 297 TAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEV 349
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
++ GAG G T YPP+S+ R+VD AIF++H++G SS +
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMT 283
Query: 471 FDQLPLFV*AV 503
++PLF +V
Sbjct: 284 LHKVPLFAWSV 294
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 52 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 225
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 226 RINNIRF 246
R+NN+ +
Sbjct: 202 RLNNLSY 208
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 78.6 bits (185), Expect = 1e-13
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEV
Sbjct: 204 AGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEV 244
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 192
+G+IGT+ +LIR EL PG I D+Q+YN+I+TAHA N L+P
Sbjct: 26 AGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLP 85
Query: 193 LILGAPDIAFPRINNIRF 246
L LG PD+ FPR+NNI +
Sbjct: 86 LGLGGPDMGFPRLNNISY 103
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 658
AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 122 AGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/71 (52%), Positives = 43/71 (60%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 471 FDQLPLFV*AV 503
++PLFV AV
Sbjct: 97 PXRMPLFVWAV 107
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEV
Sbjct: 195 TSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEV 247
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/70 (47%), Positives = 35/70 (50%)
Frame = +3
Query: 294 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 473
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 474 DQLPLFV*AV 503
LPLFV +V
Sbjct: 183 KDLPLFVWSV 192
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+G + L +L+R EL PG L G+ YN I T H N V
Sbjct: 28 NGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFV 87
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++GAPD++FPR+NN F
Sbjct: 88 PILIGAPDMSFPRLNNFSF 106
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKKNF 738
YILILPGFG++SHII+ K+ F
Sbjct: 248 YILILPGFGLVSHIIATFSKKRVF 271
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/53 (66%), Positives = 38/53 (71%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEV
Sbjct: 234 TAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEV 286
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = +3
Query: 297 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 476
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 477 QLPLFV*AV 503
++PLFV +V
Sbjct: 223 KMPLFVWSV 231
Score = 49.6 bits (113), Expect = 8e-05
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPG-------SLIGD------DQIY---NTIVTAHAXXXXXXX 147
+GIIG ++ L+RAEL PG + D DQ Y N ++TAH
Sbjct: 50 AGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAHGLIMVFFM 109
Query: 148 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 246
N VP+++GAPD+AFPR+NNI F
Sbjct: 110 VMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEV
Sbjct: 230 AAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEV 270
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 192
SG++GT+ +LIR EL PG I D+Q+YN+I+T+H N L+P
Sbjct: 52 SGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLP 111
Query: 193 LILGAPDIAFPRINNIRF 246
+++G PD+AFPR+NN+ +
Sbjct: 112 ILIGGPDMAFPRLNNVSY 129
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 145 IENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 33.5 bits (73), Expect = 5.6
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKKNF 738
YILI+PGFGIIS +IS K F
Sbjct: 271 YILIIPGFGIISTVISANSNKNVF 294
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 192
SG++GT+ +LIR EL PG I ++Q+YN+I+TAHA N L+P
Sbjct: 54 SGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMP 113
Query: 193 LILGAPDIAFPRINNIRF 246
L++G PD+AFPR+NNI F
Sbjct: 114 LMIGGPDMAFPRLNNISF 131
Score = 72.9 bits (171), Expect = 7e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +2
Query: 554 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEV
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEV 269
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Frame = +3
Query: 291 VENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
TAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEV
Sbjct: 192 TAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEV 244
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 190 PLILGAPDIAFPRINNIRF 246
PL++GA D AFPRINNI F
Sbjct: 85 PLMIGATDTAFPRINNIAF 103
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 471 FDQLPLFV 494
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKKNF 738
YILI+PGFGIISH++S K F
Sbjct: 245 YILIIPGFGIISHVVSTYSKKPVF 268
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 72.5 bits (170), Expect = 1e-11
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
TAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEV
Sbjct: 192 TAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEV 244
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/71 (53%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 471 FDQLPLFV*AV 503
++PLFV A+
Sbjct: 179 MHKMPLFVWAI 189
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ G+++ ++IR EL PGS L G+ Q++N +V HA N ++
Sbjct: 25 SGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYML 84
Query: 190 PLILGAPDIAFPRINNIRF 246
PL++GA D++FPRIN+I F
Sbjct: 85 PLMIGATDMSFPRINSIGF 103
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKKNF 738
YILI+PGFGI+SHI+S K F
Sbjct: 245 YILIIPGFGIVSHIVSTYSKKPVF 268
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEV
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEV 333
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 300 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
Score = 38.7 bits (86), Expect = 0.15
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 198
G IG L LLIR L +P + +YN +VT H N +P+
Sbjct: 125 GFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIF 184
Query: 199 LGAPDIAFPRINNI 240
L D+ PR+N++
Sbjct: 185 LCLDDLLLPRLNSL 198
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++GAPD+AFPR+NNI F
Sbjct: 84 PVMIGAPDMAFPRLNNISF 102
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 643
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/71 (52%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 471 FDQLPLFV*AV 503
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++GAPD+AFPR+NNI F
Sbjct: 84 PVMIGAPDMAFPRLNNISF 102
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/71 (52%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 471 FDQLPLFV*AV 503
+LPLFV A+
Sbjct: 178 LHKLPLFVWAI 188
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++GAPD+AFPR+NNI F
Sbjct: 84 PVMIGAPDMAFPRLNNISF 102
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+G++GT +LIR EL PG+ I G+ Q+YN ++TAHA N V
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFV 87
Query: 190 PLILGAPDIAFPRINNIRF 246
P+++G+PD+AFPR+NNI F
Sbjct: 88 PILIGSPDMAFPRLNNISF 106
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEV
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEV 246
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG +G L IR EL G L GD Q YN ++T+H N +
Sbjct: 27 SGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFI 86
Query: 190 PLILGAPDIAFPRINNIRF 246
P++ G PD+ FPR+NN+ F
Sbjct: 87 PVMAGFPDMVFPRLNNMSF 105
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 294 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
E G G G T+YP L H + D +F++HL GISS
Sbjct: 122 EEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEV
Sbjct: 201 TSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEV 253
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+G+ G+ L +LIR EL +PG G Q+YN+++T H N ++
Sbjct: 35 AGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWML 94
Query: 190 PLILGAPDIAFPRINNIRF 246
PL+LGAP++AFPR+N + F
Sbjct: 95 PLMLGAPEMAFPRVNALSF 113
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEV
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEV 261
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 190 PLILGAPDIAFPRINNIRF 246
PL +G+ D AFPRINN+ F
Sbjct: 102 PLQIGSNDTAFPRINNLAF 120
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 471 FDQLPLFV*AV 503
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEV
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEV 261
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 190 PLILGAPDIAFPRINNIRF 246
PL +G+ D AFPRINN+ F
Sbjct: 102 PLQIGSNDTAFPRINNLAF 120
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 471 FDQLPLFV*AV 503
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEV
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEV 246
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
SG+ G SL +R EL +PG + +Y++I+T HA N +PL
Sbjct: 28 SGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPL 87
Query: 196 ILGAPDIAFPRINNI 240
++ D++ PR+NN+
Sbjct: 88 MIKIKDLSMPRLNNL 102
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 300 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGK 729
YILILP FG+ISHI+ + K
Sbjct: 247 YILILPAFGVISHILCRSSAK 267
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 190 PLILGAPDIAFPRINNIRF 246
PL++GA D AFPRINNI F
Sbjct: 85 PLMIGATDTAFPRINNIAF 103
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/68 (52%), Positives = 40/68 (58%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 471 FDQLPLFV 494
+LPLFV
Sbjct: 179 MHKLPLFV 186
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 655
TAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 192 TAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 64.5 bits (150), Expect = 3e-09
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEV
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEV 227
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/77 (32%), Positives = 33/77 (42%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
S ++G S LL R +L P L D +YN VT H N L+P
Sbjct: 23 SALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPY 80
Query: 196 ILGAPDIAFPRINNIRF 246
PD+ FPR+N + F
Sbjct: 81 HCNLPDLLFPRMNALSF 97
Score = 36.7 bits (81), Expect = 0.60
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 303 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS +
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 471 FDQLPLFV*AV 503
+LPLFV A+
Sbjct: 179 MHKLPLFVWAI 189
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG+ GT++ L+IR EL PG L G++Q++N +V HA N ++
Sbjct: 25 SGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYML 84
Query: 190 PLILGAPDIAFPRINNIRF 246
PL++GA D AFPRINNI F
Sbjct: 85 PLMIGATDTAFPRINNIGF 103
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 655
+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 204 SAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
S +IGT L +IR EL N GS L G+ Q +N ++TAHA N L+
Sbjct: 30 SAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLM 89
Query: 190 PLILGAPDIAFPRINNIRF 246
PL+LGA D+AF R+NNI F
Sbjct: 90 PLMLGASDMAFARLNNISF 108
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEV 249
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 471 FDQLPLFV*AV 503
++ +PLF AV
Sbjct: 184 YENVPLFAWAV 194
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
S +IGT L +IR EL N GS L G+ Q +N ++TAHA N L+
Sbjct: 30 SAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLM 89
Query: 190 PLILGAPDIAFPRINNIRF 246
PL+LGA D+AF R+NNI F
Sbjct: 90 PLMLGASDMAFARLNNISF 108
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +2
Query: 548 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEV
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEV 249
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
G G L +++R EL + +I + + YN I T H N +
Sbjct: 29 GSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFL 88
Query: 190 PLILGAPDIAFPRINNI 240
P++ G+P++A+PRIN+I
Sbjct: 89 PILCGSPELAYPRINSI 105
Score = 36.7 bits (81), Expect = 0.60
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 294 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 410
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 33.1 bits (72), Expect = 7.4
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 667 YILILPGFGIISHIIS 714
YILILP FG+ISH+IS
Sbjct: 250 YILILPAFGVISHVIS 265
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 190 PLILGAPDIAFPRINNIRF 246
PL +G+ D AFPRINN+ F
Sbjct: 102 PLQIGSNDTAFPRINNLAF 120
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 471 FDQLPLFV*AV 503
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 655
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 190 PLILGAPDIAFPRINNIRF 246
PL +G+ D AFPRINN+ F
Sbjct: 102 PLQIGSNDTAFPRINNLAF 120
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 470
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 471 FDQLPLFV*AV 503
+ +LPLFV +V
Sbjct: 196 YSKLPLFVWSV 206
Score = 52.8 bits (121), Expect = 9e-06
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 643
A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/56 (46%), Positives = 40/56 (71%), Gaps = 6/56 (10%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV------IF*FYQDLV 694
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP V +F FY +++
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 41.1 bits (92), Expect = 0.028
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 70 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 234
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 58.8 bits (136), Expect = 1e-07
Identities = 41/113 (36%), Positives = 50/113 (44%)
Frame = +3
Query: 165 WRIWKLXXXXXXXXXXXXXPTNK*YKILTXXXXXXXXXXXXXVENGAGTG*TVYPPLSSN 344
W IWKL P NK YKILT N + PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINK---RNSS--------PLASS 76
Query: 345 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 503
IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV
Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAV 129
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 578 NLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
N T+FFDPAGGGD IL+QHLF FFGHPEV
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEV 220
Score = 37.5 bits (83), Expect = 0.34
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFG+ISH+I+ GK+
Sbjct: 221 YILILPGFGMISHVIAHYSGKR 242
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV----IF*FYQDLV*FLIL- 709
AG IT+LL+DRN N FF GG PIL+Q++ FGH +V +F FYQDL F L
Sbjct: 36 AGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLILFWFYQDLDLFRKLW 95
Query: 710 FHKKEEKRTF 739
+ KK+ K++F
Sbjct: 96 WMKKDFKKSF 105
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 192
G+ GT++ ++IR EL PG+ L G+ Q++N +V HA N L+P
Sbjct: 26 GMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLP 85
Query: 193 LILGAPDIAFPRINNIRF 246
L++GA D++F R+NNI F
Sbjct: 86 LMIGASDMSFARLNNISF 103
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 509 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEV
Sbjct: 197 TSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEV 249
Score = 40.7 bits (91), Expect = 0.037
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
Score = 40.3 bits (90), Expect = 0.049
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
G+IG + +LIR EL G +I D +IYN + T H N L
Sbjct: 32 GMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLY 91
Query: 190 PLILGAPDIAFPRIN 234
P++LG D+ +PR+N
Sbjct: 92 PVLLGYCDVVYPRVN 106
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEV F
Sbjct: 221 ASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIF 263
Score = 36.7 bits (81), Expect = 0.60
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+G L LL+R +L P + IG D+ YN I T H LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMV 103
Query: 202 GAPDIAFPRIN 234
G IAFPR+N
Sbjct: 104 GTRHIAFPRLN 114
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEV
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEV 253
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 183
+GI+G + +LIR EL G I + IYN +T H N
Sbjct: 32 AGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNY 91
Query: 184 LVPLILGAPDIAFPRINNIRF 246
L+P+++G +++ PR+N I F
Sbjct: 92 LIPMLIGTSELSMPRMNGISF 112
Score = 33.5 bits (73), Expect = 5.6
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 309 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 410
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEV
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEV 297
Score = 39.9 bits (89), Expect = 0.064
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 43 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 222
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 223 PRINNIRF 246
PRIN I F
Sbjct: 150 PRINAIAF 157
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +3
Query: 291 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 386
VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 52.8 bits (121), Expect = 9e-06
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +1
Query: 535 TCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 657
TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 112 TCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 193 LILGAPDIAFPRINNIRF 246
L+LGAPD+AFPR+NN+ F
Sbjct: 1 LMLGAPDMAFPRMNNMSF 18
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP V
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAV 254
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
IG S +R EL P ++YN ++T H N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVG 102
Query: 205 APDIAFPRINNIRF 246
D+AFPR+N + F
Sbjct: 103 TEDMAFPRLNAVAF 116
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEV
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEV 404
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 189
+G+ G +L +IR EL +P S GD Y +VTAH N L+
Sbjct: 74 TGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLI 133
Query: 190 PLILGAPDIAFPRINNIRF 246
P +G+ D+A+PR+N+I F
Sbjct: 134 PYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2
Query: 548 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
G +LL D + TSFF P GGGDP+L+QH F F+ HP V
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAV 269
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G L +++R EL P + + D +YN + T H N L+P ++
Sbjct: 52 LVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMI 110
Query: 202 GAPDIAFPRINNIRF 246
GAPD+AFP++N F
Sbjct: 111 GAPDMAFPKLNAAAF 125
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AI +LL DRN TSFF AG G IL+QHLF FFGHPEV
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEV 328
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G + +L+R EL +PG + + YN+++T+H N L+PL++G
Sbjct: 111 VGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIG 169
Query: 205 APDIAFPRINNIRF 246
A D+AFPRIN I F
Sbjct: 170 ADDMAFPRINAIAF 183
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+ +LL DR L ++FFDP GG +L+QH F FGHPEV
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEV 262
Score = 39.5 bits (88), Expect = 0.085
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G LL+R +L P + +++N + T H N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIG 107
Query: 205 APDIAFPRINNIRF 246
A D+AFPR+N+ F
Sbjct: 108 ARDVAFPRLNSFGF 121
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEV
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEV 245
Score = 40.3 bits (90), Expect = 0.049
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+G +L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMV 95
Query: 202 GAPDIAFPRINNIRF 246
D+A+P++N I F
Sbjct: 96 RYKDMAYPKLNAIAF 110
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +2
Query: 563 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
LL DR+ T FF P GGD +L+QHLF FFGHPEV
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEV 261
Score = 41.5 bits (93), Expect = 0.021
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+IG LL+R +LG P + +YN + T H N +VPL++
Sbjct: 47 LIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMI 105
Query: 202 GAPDIAFPRIN 234
GA D+AFPR+N
Sbjct: 106 GARDMAFPRLN 116
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEV 667
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEV
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEV 253
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/71 (38%), Positives = 34/71 (47%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G LLIR EL PG I D YN T H N ++PL+L
Sbjct: 58 LVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLML 117
Query: 202 GAPDIAFPRIN 234
GA D+AFPR+N
Sbjct: 118 GAKDVAFPRLN 128
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 548 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEV 667
G + +L+T NL FDPA GGDP+L+QHLF F+ HP V
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAV 269
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 572 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
+R + FFDP GGDP+L+QHLF FGHPEV F
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIF 289
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G LLIR EL PG I D YN + T H N L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 205 APDIAFPRINNIRF 246
A D+AFP++N + F
Sbjct: 112 AKDVAFPKLNLLSF 125
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
++ ++ + FDPA GGDP+L+QH F F+ HP V
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAV 262
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEV 667
A +LL DR+ T FF GGGDPIL+QHLF FGHPEV
Sbjct: 238 AALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEV 281
Score = 35.1 bits (77), Expect = 1.8
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNP-------GSLI-GDDQI-----YNTIVTAHAXXXXXXXXXXXX 162
++G +L +LIR + G P G L+ G+ + Y I T H
Sbjct: 47 LVGGALAMLIRWQWGFPYRPVPLVGRLLFGESGVIGPATYQQIFTTHGLVMIFFAVTPVL 106
Query: 163 XXXXXN*LVPLILGAPDIAFPRINNIRF 246
N L+PL++GA D+AFPR+N F
Sbjct: 107 IGTFGNLLIPLMIGARDMAFPRLNMYSF 134
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 303 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
A +L +R+ FF GGDP+L+QHLF FFGHPEV F
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP V
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAV 243
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 37 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 213
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 214 IAFPRIN 234
+AFPR+N
Sbjct: 95 VAFPRVN 101
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/46 (56%), Positives = 29/46 (63%), Gaps = 10/46 (21%)
Frame = +2
Query: 560 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEV 667
+LL DR L TSFF P GGG P+L+QHLF FFGHPEV
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEV 283
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 19 GIIGTSLRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 195
G++ L L+R +LG PG+ D Y +T H N L+PL
Sbjct: 53 GLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPL 112
Query: 196 ILGAPDIAFPRINNIRF 246
++GA D+ FP +N + +
Sbjct: 113 MVGARDMVFPYVNMLSY 129
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 560 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEV 667
+LL DRNL T FF +PAGG +L+ HLF FFGHPEV
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEV 251
Score = 38.3 bits (85), Expect = 0.20
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+I SL LL R +L P S Y VT H N +VPL +
Sbjct: 37 LIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQI 95
Query: 202 GAPDIAFPRINNIRF 246
GA D+AFPR+N + +
Sbjct: 96 GARDLAFPRLNALSY 110
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 560 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
+L +R L FFD GGDP+L+QHLF FGHPEV F
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A +L DRN T FFD A GG P+L+QHLF F HP V
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWV 279
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 300 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 410
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 36.7 bits (81), Expect = 0.60
Identities = 25/73 (34%), Positives = 30/73 (41%)
Frame = +1
Query: 28 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 207
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 208 PDIAFPRINNIRF 246
P +A PR+ N+ F
Sbjct: 80 PXMAXPRLXNMSF 92
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 126
SG+IG+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 10 SGLIGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 554 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
+ +++ DR T+FF+P GG+ ++++HLF FGHPEV
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEV 252
Score = 36.3 bits (80), Expect = 0.79
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G + IR +L P + Q YN ++T H N +VPL +
Sbjct: 40 LVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQI 98
Query: 202 GAPDIAFPRINNIRF 246
GA D++FP +N + F
Sbjct: 99 GARDVSFPFLNALGF 113
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
A +L +R + FF GGDP+L+QHLF FFGHPEV F
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIF 332
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
A +L DR FF A GDPIL+QHLF FFGHPEV F
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIF 269
Score = 37.9 bits (84), Expect = 0.26
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
I+G L LL+R +L P + D + YN + + H ++PL+L
Sbjct: 52 ILGVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLML 110
Query: 202 GAPDIAFPRIN 234
G D+ FPR+N
Sbjct: 111 GTRDMTFPRLN 121
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 545 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
AG + L +R T FFD A GG P+L+Q LF FFGHPEV
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEV 241
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2
Query: 563 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
+L DR L +DPA GG +L+QHLF FFGHPEV
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEV 268
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G + LLIRAEL PG ++ +N + T H N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIG 113
Query: 205 APDIAFPRINNIRF 246
APD+AFPR+N F
Sbjct: 114 APDVAFPRLNAFGF 127
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A ++L +R + S+F+PA GGDP+L+Q F F+ HP V
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTV 253
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +1
Query: 43 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 222
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 223 PRIN 234
PR+N
Sbjct: 107 PRVN 110
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 666 LYFNFTRIWYNFSYYFTRKRKK 731
LYFNFT IWYNFSYYF K KK
Sbjct: 37 LYFNFTSIWYNFSYYFPSKSKK 58
Score = 41.1 bits (92), Expect = 0.028
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 577 KLKYIIF*SCWRRRPNFISTFILIFWTS*S-YILILPGFGIISHIISQERGKKNFW 741
K KYIIF S W F+STFILIFWT S Y + S+ + K N W
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLW 62
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+ +L+ DR +FF+ GG + YQHLF FGHPEV
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEV 263
Score = 37.1 bits (82), Expect = 0.45
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G ++R +L PG + + +N + T HA N +PL++
Sbjct: 45 LVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMI 103
Query: 202 GAPDIAFPRIN 234
GA D+AFPR+N
Sbjct: 104 GARDVAFPRLN 114
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 560 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
+L +R + FF A GGD +L+QHLF FGHPEV F
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIF 263
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
++G L +LIRA+L P S + YN + T H L+P +L
Sbjct: 45 VVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLL 103
Query: 202 GAPDIAFPRINNIRF 246
G+ D+AFPR+ F
Sbjct: 104 GSRDLAFPRLTAYGF 118
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFG+ISHIISQE GKK
Sbjct: 157 YILILPGFGMISHIISQESGKK 178
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 560 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF*F 679
+L +R FF A GGD +L+QHLF FGHPEV F
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIF 263
Score = 35.5 bits (78), Expect = 1.4
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+IG L +LIRA+L +P S + Y + T H L+P +L
Sbjct: 45 LIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKML 103
Query: 202 GAPDIAFPRINNIRF 246
G+ D+A+PR++ F
Sbjct: 104 GSRDLAYPRLSAYGF 118
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +1
Query: 508 YSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 645
YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 89 YSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 10/49 (20%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEV 667
A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEV
Sbjct: 257 AALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEV 305
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +1
Query: 43 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 222
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 223 PRINNIRF 246
P +NN+ F
Sbjct: 135 PYLNNLSF 142
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+ +L DR FF GG P+L+ +LF +GHPEV
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEV 283
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEV 667
A +L DR TSFF P+G GG +L+QHLF FFGHPEV
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEV 291
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVIF 673
A+ +L DR L T FF GG+ +LY +LF +GHPEV F
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYF 308
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 40.3 bits (90), Expect = 0.049
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHA 126
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 39.9 bits (89), Expect = 0.064
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 11/47 (23%)
Frame = +2
Query: 560 ILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEV 667
++L DR + T FF P AGGG P+L+QHLF F+ HP V
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAV 292
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 94 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 246
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 548 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEV
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEV 288
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +1
Query: 22 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 201
+ G L LL R EL + G+ + YN V+ H N LVPL +
Sbjct: 38 VFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQI 96
Query: 202 GAPDIAFPRINNIRF 246
GA D+AFPR+N + +
Sbjct: 97 GADDLAFPRLNALSY 111
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Frame = +2
Query: 551 AITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVIF*FYQDL 691
A+ IL +D L T++F D G +L+ HLF FFGHPEV F+ L
Sbjct: 216 ALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPAL 273
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 38.3 bits (85), Expect = 0.20
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +1
Query: 25 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 204
+G L L IR +L P + YN ++T HA N +PL LG
Sbjct: 49 LGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLG 108
Query: 205 APDIAFPRIN 234
D+A PR+N
Sbjct: 109 VRDVALPRLN 118
Score = 36.7 bits (81), Expect = 0.60
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 581 LNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
L S F+P GG P+LYQ F F+ HP V
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAV 261
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 667 YILILPGFGIISHIISQERGKK 732
YILILPGFG+ISHI++ GKK
Sbjct: 9 YILILPGFGMISHIVAYYSGKK 30
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 37.9 bits (84), Expect = 0.26
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 551 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
A+ +L DR L+ F GG+P++Y +LF +GHPEV
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEV 287
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 37.5 bits (83), Expect = 0.34
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 666 LYFNFTRIWYNFSYYFTRKRKKELL 740
LYFN IWYNF YY+T K K L
Sbjct: 13 LYFNSPSIWYNFPYYYTSKSGKNCL 37
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 608 GGGDPILYQHLF*FFGHPEV 667
GGG P+L+QHLF F+ HP V
Sbjct: 276 GGGQPLLWQHLFWFYSHPAV 295
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 94 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 246
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIV 114
SG+ GT++ L+IR EL PGS L G+ Q++N +V
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAEL--GNPGSLIGDDQIYNTIVTAHA 126
+ ++GT + ++IR EL GN G++Q YN ++T HA
Sbjct: 3 ASMVGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHA 41
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 563 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 667
+ DR L+T F+ GG +LY +L +GHPEV
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEV 282
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTA 120
SG+ GT++ L+IR EL PGS L G+ Q++N T+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_Q7RMW2 Cluster: Phosphatase-related; n=2; Plasmodium
(Vinckeia)|Rep: Phosphatase-related - Plasmodium yoelii
yoelii
Length = 410
Score = 33.1 bits (72), Expect = 7.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 618 TQFYINIYFDFLDILKLYFNFTRIWYNFSYYFTRKRKKE 734
T FYINI+F FL IL + + ++ +Y+ T+ + K+
Sbjct: 372 TNFYINIFFYFLKILYILSSIVKVSERDTYHVTKSKVKK 410
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 105
+G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 16 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 105
+G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,821,405
Number of Sequences: 1657284
Number of extensions: 9587024
Number of successful extensions: 21255
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 20184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21162
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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