Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20177
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.1  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = +2

Query: 203 IIFELSLCWKIYHLMRKTASFYRR 274
           +++ L+LC+ +Y+  ++   F+ R
Sbjct: 109 VLYVLTLCYAVYYWRQQYEDFWHR 132


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 215 LSLCWKIYHLMRKTASFYRRLR 280
           LS C+ +YHL  K+    R  +
Sbjct: 284 LSYCFNLYHLASKSNQLSREAK 305


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 215 LSLCWKIYHLMRKTASFYRRLR 280
           LS C+ +YHL  K+    R  +
Sbjct: 284 LSYCFNLYHLASKSNQLSREAK 305


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 211 RAVALLEDLPFDEKNRLILSKTSSLKWKKD 300
           R + +   L   E+   I  +   +KWKKD
Sbjct: 262 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 291


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 687 ICWKKLDAKGRGSFNVADYGRGLHPAVERYRLTMM 583
           IC+  +    RG  + ADY   LH    R +  MM
Sbjct: 459 ICFWYVPKSLRGRKDEADYKDKLHKVAPRIKERMM 493


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 121 LCGPKLSLCGLVLSVWGI 174
           L GP  + C +++ +W I
Sbjct: 425 LTGPFFTFCNVLMEMWNI 442


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 281 H*SGKRIYPECTKLLDCGIVVLDYTGCIWTSIL 379
           H  G+ + P  T LL     V  Y+G +WT IL
Sbjct: 110 HTFGRFLAPNLTYLL-----VALYSGYVWTDIL 137


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 211 RAVALLEDLPFDEKNRLILSKTSSLKWKKD 300
           R + +   L   E+   I  +   +KWKKD
Sbjct: 262 RRIEIAHTLVLSERQIKIWFQNRRMKWKKD 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,837
Number of Sequences: 336
Number of extensions: 4121
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)