Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20177
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062705-1|AAH62705.1|   98|Homo sapiens similar to DNA segment,...    65   2e-10
BC051802-1|AAH51802.1|   98|Homo sapiens similar to DNA segment,...    65   2e-10
BC095436-1|AAH95436.1|  108|Homo sapiens MGC71993 protein protein.     30   7.9  

>BC062705-1|AAH62705.1|   98|Homo sapiens similar to DNA segment,
           Chr 11, Brigham & Womens Genetics 0434 expressed
           protein.
          Length = 98

 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 23/44 (52%), Positives = 35/44 (79%)
 Frame = +1

Query: 124 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKN 255
           CGPKL+ CG+VLS WG+I L ++G+F+ + +  L+ED+PF EK+
Sbjct: 7   CGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKD 50


>BC051802-1|AAH51802.1|   98|Homo sapiens similar to DNA segment,
           Chr 11, Brigham & Womens Genetics 0434 expressed
           protein.
          Length = 98

 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 23/44 (52%), Positives = 35/44 (79%)
 Frame = +1

Query: 124 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEKN 255
           CGPKL+ CG+VLS WG+I L ++G+F+ + +  L+ED+PF EK+
Sbjct: 7   CGPKLAACGIVLSAWGVIMLIMLGIFFNVHSAVLIEDVPFTEKD 50


>BC095436-1|AAH95436.1|  108|Homo sapiens MGC71993 protein protein.
          Length = 108

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 9/23 (39%), Positives = 18/23 (78%)
 Frame = +1

Query: 187 LMGVFYYIRAVALLEDLPFDEKN 255
           ++G+F+ + +  L+ED+PF EK+
Sbjct: 38  MLGIFFNVHSAVLIEDVPFTEKD 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,114,427
Number of Sequences: 237096
Number of extensions: 2277079
Number of successful extensions: 3738
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3738
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)