Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20177
(760 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118852-1|AAM50712.1| 95|Drosophila melanogaster GM16138p pro... 81 1e-15
AE013599-7|EAA46159.1| 95|Drosophila melanogaster CG40127-PA p... 81 1e-15
AE013599-3344|AAF46807.1| 107|Drosophila melanogaster CG11269-P... 47 2e-05
BT016079-1|AAV36964.1| 922|Drosophila melanogaster LD47749p pro... 30 3.0
AY052114-1|AAK93538.1| 922|Drosophila melanogaster SD06427p pro... 30 3.0
AE014297-1680|AAF54941.1| 922|Drosophila melanogaster CG9799-PA... 30 3.0
AY128436-1|AAM75029.1| 927|Drosophila melanogaster LD08259p pro... 29 5.2
AE013599-1176|AAM68750.1| 927|Drosophila melanogaster CG12342-P... 29 5.2
AE013599-1175|AAF58749.2| 927|Drosophila melanogaster CG12342-P... 29 5.2
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 29 6.9
>AY118852-1|AAM50712.1| 95|Drosophila melanogaster GM16138p
protein.
Length = 95
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +1
Query: 118 KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK 252
K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+
Sbjct: 2 KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEE 46
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 249 EKPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSGHQFWLNNR 392
E+ HS+EDF + Y NA NCWIAA +Y++TL++S QF++N+R
Sbjct: 44 EEEYHSLEDFYAAANRAYNQNAYNCWIAACIYVLTLLLSAQQFYMNSR 91
>AE013599-7|EAA46159.1| 95|Drosophila melanogaster CG40127-PA
protein.
Length = 95
Score = 81.4 bits (192), Expect = 1e-15
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +1
Query: 118 KLCGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLPFDEK 252
K+CGPKLSLCGL++SVWGI+QL LMG+F+YI +VAL+EDLP +E+
Sbjct: 2 KICGPKLSLCGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEE 46
Score = 59.3 bits (137), Expect = 6e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 249 EKPPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSGHQFWLNNR 392
E+ HS+EDF + Y NA NCWIAA +Y++TL++S QF++N+R
Sbjct: 44 EEEYHSLEDFYAAANRAYNQNAYNCWIAACIYVLTLLLSAQQFYMNSR 91
>AE013599-3344|AAF46807.1| 107|Drosophila melanogaster CG11269-PA
protein.
Length = 107
Score = 47.2 bits (107), Expect = 2e-05
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 124 CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLEDLP 240
CG K L L +S WG + L L+G+F+Y++++ LLE LP
Sbjct: 3 CGRKCCLFCLFMSAWGFLMLNLLGIFFYVQSLMLLESLP 41
>BT016079-1|AAV36964.1| 922|Drosophila melanogaster LD47749p
protein.
Length = 922
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 656 LPFASNFFQHIATSHQPTYLNK 721
+PF S FQ A +H PTY+NK
Sbjct: 154 VPFRSEEFQITAVTHPPTYINK 175
>AY052114-1|AAK93538.1| 922|Drosophila melanogaster SD06427p
protein.
Length = 922
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 656 LPFASNFFQHIATSHQPTYLNK 721
+PF S FQ A +H PTY+NK
Sbjct: 154 VPFRSEEFQITAVTHPPTYINK 175
>AE014297-1680|AAF54941.1| 922|Drosophila melanogaster CG9799-PA
protein.
Length = 922
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 656 LPFASNFFQHIATSHQPTYLNK 721
+PF S FQ A +H PTY+NK
Sbjct: 154 VPFRSEEFQITAVTHPPTYINK 175
>AY128436-1|AAM75029.1| 927|Drosophila melanogaster LD08259p
protein.
Length = 927
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 565 LNLLKHHHRQPVSLHCWM*TSPIVRHIERSSTFRIQFFPAYCHKSSAHL 711
L+L H H+ PVS+ P RHIE + Y HK+ L
Sbjct: 321 LDLAGHIHKGPVSVGNTCYCGPFFRHIENKLNCNRKSLKKYVHKTKERL 369
>AE013599-1176|AAM68750.1| 927|Drosophila melanogaster CG12342-PB,
isoform B protein.
Length = 927
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 565 LNLLKHHHRQPVSLHCWM*TSPIVRHIERSSTFRIQFFPAYCHKSSAHL 711
L+L H H+ PVS+ P RHIE + Y HK+ L
Sbjct: 321 LDLAGHIHKGPVSVGNTCYCGPFFRHIENKLNCNRKSLKKYVHKTKERL 369
>AE013599-1175|AAF58749.2| 927|Drosophila melanogaster CG12342-PA,
isoform A protein.
Length = 927
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 565 LNLLKHHHRQPVSLHCWM*TSPIVRHIERSSTFRIQFFPAYCHKSSAHL 711
L+L H H+ PVS+ P RHIE + Y HK+ L
Sbjct: 321 LDLAGHIHKGPVSVGNTCYCGPFFRHIENKLNCNRKSLKKYVHKTKERL 369
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 29.1 bits (62), Expect = 6.9
Identities = 9/40 (22%), Positives = 24/40 (60%)
Frame = -3
Query: 725 KFCLNKWADDLWQYAGKNWMRKVEDRSMWRTMGEVYIQQW 606
+FC +K+ D++ GK+++ ++ S + T+ ++ + W
Sbjct: 764 EFCRDKFVIDIYSVEGKHYLSCIDTYSKFATLEQIKTKDW 803
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,873,045
Number of Sequences: 53049
Number of extensions: 694902
Number of successful extensions: 1594
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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