Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20174
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   1.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   2.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.8  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   7.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.8  

>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 241 RARVRKTQKHVERVVTVALVREEVQPMRVCHRRN 342
           R  + K Q++ ER   +A  REE++ MR  H R+
Sbjct: 30  RILMTKQQEYTERRELIA--REEMEKMRAAHERD 61


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 112  CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 225
            CG K++ +DP    E+        +R+M K+ ++ K+P
Sbjct: 1179 CGSKQLDIDP---QEVVGGAGACGVRRMAKEKMLRKRP 1213


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
 Frame = -3

Query: 312  YLFSYQSHSDDPFYVLLCFSDTSAG----VYCYRFLDDETILDHLTDVLSGV 169
            YL  ++  +  PF++  CF   SA     + CY       +  H T  +SG+
Sbjct: 3062 YLKHHKRPTKTPFHIANCFRTNSADNLNTITCYEQHGLSYVFPHNTSNISGI 3113


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = -3

Query: 312  YLFSYQSHSDDPFYVLLCFSDTSAG----VYCYRFLDDETILDHLTDVLSGV 169
            YL  ++  +  PF++  CF   SA     + CY       +  H T  + G+
Sbjct: 3059 YLKHHKRQTKTPFHITNCFRTNSADNLNTITCYEQHGLSYVFPHNTSNIIGI 3110


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 163 NTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 255
           N ++   +R  IK+GL + +PVA + RA  R
Sbjct: 370 NMHNLPYLRACIKEGLRMYQPVAGNMRAAGR 400


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 47   DLTVSG*VPSSCRRGLQPLLCDVVKR 124
            +LT+   VP+ C  G Q  +C ++K+
Sbjct: 1107 ELTIHRYVPARCGAGCQDRVCILLKK 1132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,148
Number of Sequences: 2352
Number of extensions: 14638
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)