Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20173
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y678 Cluster: Coatomer subunit gamma; n=88; Eukaryota... 111 2e-23
UniRef50_Q54HL0 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_Q0WW26 Cluster: Coatomer subunit gamma; n=18; Eukaryota... 95 2e-18
UniRef50_A4RSY5 Cluster: Coatomer gamma subunit; n=2; Ostreococc... 90 4e-17
UniRef50_Q4PGJ5 Cluster: Putative uncharacterized protein; n=3; ... 88 2e-16
UniRef50_A5K5A9 Cluster: Coat protein, gamma subunit, putative; ... 80 6e-14
UniRef50_Q8IHR6 Cluster: Coat protein, gamma subunit, putative; ... 79 1e-13
UniRef50_A6R6S2 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_Q7RRK1 Cluster: Coatomer gamma subunit; n=2; Plasmodium... 77 4e-13
UniRef50_A1CF77 Cluster: Coatomer subunit gamma, putative; n=13;... 77 4e-13
UniRef50_A0DIB1 Cluster: Chromosome undetermined scaffold_51, wh... 75 1e-12
UniRef50_Q6C314 Cluster: Yarrowia lipolytica chromosome F of str... 72 1e-11
UniRef50_P87140 Cluster: Probable coatomer subunit gamma; n=1; S... 71 3e-11
UniRef50_Q6BZ81 Cluster: Debaryomyces hansenii chromosome A of s... 70 5e-11
UniRef50_Q5CYL2 Cluster: Coatomer SEC21 gamma subunit like; n=2;... 70 7e-11
UniRef50_Q4N2P9 Cluster: Coatomer gamma subunit, putative; n=2; ... 69 9e-11
UniRef50_Q382Z1 Cluster: Coatomer gamma subunit, putative; n=3; ... 69 1e-10
UniRef50_A7ATJ0 Cluster: Adaptin N terminal region family protei... 68 3e-10
UniRef50_P32074 Cluster: Coatomer subunit gamma; n=6; Saccharomy... 63 6e-09
UniRef50_Q4Q800 Cluster: Coatomer gamma subunit, putative; n=3; ... 62 1e-08
UniRef50_Q1EQ36 Cluster: Gamma1-COP; n=1; Entamoeba histolytica|... 58 2e-07
UniRef50_A2FC64 Cluster: Nonclathrin coat protein gamma-like pro... 58 2e-07
UniRef50_Q1EQ35 Cluster: Gamma2-COP; n=2; Entamoeba histolytica|... 54 5e-06
UniRef50_UPI00006CC124 Cluster: Adaptin N terminal region family... 40 0.047
UniRef50_A2FU96 Cluster: Adaptin N terminal region family protei... 40 0.047
UniRef50_Q5AF24 Cluster: Potential clathrin-associated protein A... 37 0.58
UniRef50_Q1FEP5 Cluster: Lipolytic enzyme, G-D-S-L; n=1; Clostri... 36 1.0
UniRef50_Q9E948 Cluster: RNA polymerase; n=17; Flexiviridae|Rep:... 36 1.3
UniRef50_A5KA22 Cluster: Adapter-related protein complex 4 beta ... 34 3.1
UniRef50_Q49XL1 Cluster: Uncharacterized protein SSP1341; n=35; ... 34 3.1
UniRef50_A2EVJ9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q5KDA3 Cluster: Clathrin binding protein, putative; n=2... 34 4.1
UniRef50_Q5KJI7 Cluster: Golgi to vacuole transport-related prot... 33 5.4
UniRef50_Q6NFW6 Cluster: Putative membrane protein; n=1; Coryneb... 33 7.2
UniRef50_Q5CYA4 Cluster: Putative uncharacterized protein; n=2; ... 33 7.2
UniRef50_A2ER45 Cluster: Adaptin N terminal region family protei... 33 7.2
UniRef50_A7TZR7 Cluster: Replicase; n=1; Coleus vein necrosis vi... 33 9.5
UniRef50_A2BSE1 Cluster: Predicted dehydrogenase; n=1; Prochloro... 33 9.5
UniRef50_Q4PGA6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_Q9Y678 Cluster: Coatomer subunit gamma; n=88;
Eukaryota|Rep: Coatomer subunit gamma - Homo sapiens
(Human)
Length = 874
Score = 111 bits (266), Expect = 2e-23
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RM YL IKE+S +A+DVIIVTSSLTKDMTGKED YR A+RALC ITD++MLQAIERYMK
Sbjct: 86 RMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIERYMK 145
Query: 435 QAIVDKNP 458
QAIVDK P
Sbjct: 146 QAIVDKVP 153
Score = 103 bits (246), Expect = 6e-21
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 KRDVKDEDDNS-SNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTT 189
K D KDE+ SNP+Q+L+K+ VLQE R FN+T + PRKC+ ILTKILYL+NQGE+ T
Sbjct: 4 KFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGT 63
Query: 190 QEATDAFFATTKLFQSKEIMLR 255
EAT+AFFA TKLFQS + LR
Sbjct: 64 TEATEAFFAMTKLFQSNDPTLR 85
Score = 81.8 bits (193), Expect = 2e-14
Identities = 32/67 (47%), Positives = 54/67 (80%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+RW NEAQE +SDN MV YHALG+L R+ND+L+ K+++++++ +KSP++ C+
Sbjct: 172 DVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCM 231
Query: 692 LIRLAAQ 712
+IR+A++
Sbjct: 232 MIRVASK 238
>UniRef50_Q54HL0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 898
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +1
Query: 25 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATD 204
K +DD S ++NLDK V+QE R FN++ + PRKCSL++++ LYLL++G++FT EATD
Sbjct: 7 KKDDDESDFLFENLDKGQVIQEKRAFNESPIHPRKCSLVISQFLYLLSRGDSFTKTEATD 66
Query: 205 AFFATTKLFQSKEIMLR 255
FFA TKLFQSK+I LR
Sbjct: 67 IFFAATKLFQSKDIPLR 83
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/68 (64%), Positives = 56/68 (82%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
R++YL +KELS ++QD IIV SSLTKDM+ K +LYRA AIR LC ITD+S+L IERY K
Sbjct: 84 RLMYLLLKELSTISQDAIIVISSLTKDMSHKIELYRANAIRILCKITDSSILPQIERYFK 143
Query: 435 QAIVDKNP 458
Q+IV+K+P
Sbjct: 144 QSIVEKDP 151
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/71 (42%), Positives = 50/71 (70%)
Frame = +2
Query: 509 PDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLC 688
P++V+RWANE QE I++ + MV YHAL +L +++D+L+ KLV+ L K+ ++SPY+
Sbjct: 169 PEIVKRWANEVQEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLRSPYAQS 228
Query: 689 LLIRLAAQLCD 721
LIR ++ +
Sbjct: 229 YLIRCCVEVIE 239
>UniRef50_Q0WW26 Cluster: Coatomer subunit gamma; n=18;
Eukaryota|Rep: Coatomer subunit gamma - Arabidopsis
thaliana (Mouse-ear cress)
Length = 886
Score = 95.1 bits (226), Expect = 2e-18
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IKELS + +VIIVTSSL KDM K D+YRA AIR LC I D ++L IERY+K
Sbjct: 88 RMVYLIIKELSPSSDEVIIVTSSLMKDMNSKIDMYRANAIRVLCRIIDGTLLTQIERYLK 147
Query: 435 QAIVDKNP 458
QAIVDKNP
Sbjct: 148 QAIVDKNP 155
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/82 (52%), Positives = 59/82 (71%)
Frame = +1
Query: 10 LKRDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTT 189
+K+D +D+ +P+ ++K VLQE R FN V PR+CS ++TK+LYLLNQGE+FT
Sbjct: 6 VKKDDDHDDELEYSPFMGIEKGAVLQEARVFNDPQVDPRRCSQVITKLLYLLNQGESFTK 65
Query: 190 QEATDAFFATTKLFQSKEIMLR 255
EAT+ FF+ TKLFQSK+ LR
Sbjct: 66 VEATEVFFSVTKLFQSKDTGLR 87
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/69 (46%), Positives = 50/69 (72%)
Frame = +2
Query: 509 PDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLC 688
P++V+RW+NE QE I S +A+V +HAL +L R+ND+L+ KLV L++ ++SP + C
Sbjct: 173 PEIVKRWSNEVQEGIQSRSALVQFHALALLHQIRQNDRLAVSKLVGSLTRGSVRSPLAQC 232
Query: 689 LLIRLAAQL 715
LLIR +Q+
Sbjct: 233 LLIRYTSQV 241
>UniRef50_A4RSY5 Cluster: Coatomer gamma subunit; n=2;
Ostreococcus|Rep: Coatomer gamma subunit - Ostreococcus
lucimarinus CCE9901
Length = 868
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +3
Query: 207 FLCDNKTVSVQRNHAARMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALC 386
F K + N+ RM+YL IKE+ + +VIIVTSSL KDM K DLYRA AIR LC
Sbjct: 74 FFSVTKLFQSKNNNLRRMLYLIIKEICPTSDEVIIVTSSLMKDMNSKVDLYRANAIRVLC 133
Query: 387 SITDASMLQAIERYMKQAIVDKN 455
I D+++L IERY+KQAIVD++
Sbjct: 134 CIADSAILGQIERYLKQAIVDRS 156
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 KDEDD-NSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEAT 201
+DED +P+ ++K IVLQE R FN + RKC ++TK+LYL QGE FT E T
Sbjct: 12 RDEDSVEELSPFWGIEKGIVLQEARCFNDPQLDARKCQQVITKLLYLHVQGEFFTKTEIT 71
Query: 202 DAFFATTKLFQSKEIMLR 255
+ FF+ TKLFQSK LR
Sbjct: 72 EIFFSVTKLFQSKNNNLR 89
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/68 (45%), Positives = 50/68 (73%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+VRRW++E QE +NS + V +HALG+L R+ D+LS KLV +L+++ ++SP + CL
Sbjct: 176 DIVRRWSSEIQEAVNSSSPEVQFHALGLLYEIRKFDRLSINKLVAQLTRTQLRSPLAQCL 235
Query: 692 LIRLAAQL 715
LIR +++
Sbjct: 236 LIRYVSEV 243
>UniRef50_Q4PGJ5 Cluster: Putative uncharacterized protein; n=3;
Basidiomycota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 942
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/85 (51%), Positives = 57/85 (67%)
Frame = +1
Query: 25 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATD 204
KDE+ ++ YQ DKT V+QE R FN+T + PRKC ++LTK++YLL GE+F+ QEAT
Sbjct: 5 KDEEVGATGFYQ--DKTSVIQEARVFNETPISPRKCRILLTKVIYLLYMGESFSRQEATT 62
Query: 205 AFFATTKLFQSKEIMLRVWFIFASK 279
FF TKLFQ K+ LR A K
Sbjct: 63 LFFGATKLFQHKDPALRQMVYLAIK 87
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGK-EDLYRAAAIRALCSITDASMLQAIERYM 431
+MVYL IKEL + DVI+VT+S+ KDM E +YR AIR L + D SM+Q +ER+
Sbjct: 80 QMVYLAIKELCPFSDDVIMVTASIMKDMQPNVEVIYRPNAIRGLSRVVDPSMVQGLERFF 139
Query: 432 KQAIVDKN 455
K AIVDKN
Sbjct: 140 KSAIVDKN 147
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Frame = +2
Query: 530 ANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRL----------SKSHIKSPY 679
A + + + S + YHALG+L L R+ D+++ KLV +L S ++SPY
Sbjct: 210 AQSSYQAVASSTYITQYHALGLLYLIRQGDRMAITKLVQQLGGGRGGASSGQGSVLRSPY 269
Query: 680 SLCLLIRLAAQLCDGD 727
++C+L+R AA++ + D
Sbjct: 270 AICMLVRYAAKVAEED 285
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNA 568
D+VRRW NEAQE INS ++
Sbjct: 167 DVVRRWGNEAQEAINSKSS 185
>UniRef50_A5K5A9 Cluster: Coat protein, gamma subunit, putative;
n=1; Plasmodium vivax|Rep: Coat protein, gamma subunit,
putative - Plasmodium vivax
Length = 1010
Score = 79.8 bits (188), Expect = 6e-14
Identities = 41/67 (61%), Positives = 46/67 (68%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RM+YL IK L ++V IVTSSLTKDM D YRA AIR L I D+SM IERY+K
Sbjct: 98 RMIYLLIKSLPVNEKEVFIVTSSLTKDMNSANDCYRANAIRVLSKIIDSSMATQIERYLK 157
Query: 435 QAIVDKN 455
AIVDKN
Sbjct: 158 TAIVDKN 164
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 RHELKRDVKDEDDNS-SNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQG- 174
+ L +D K +D+ S +NP++ DK +LQETR F+ + +KC ILTKILYL+N+G
Sbjct: 12 QRNLLKDPKYDDEKSVANPHEG-DKASILQETRVFSSYPLNTQKCMQILTKILYLINKGE 70
Query: 175 ENFTTQEATDAFFATTKLFQSKEIMLR 255
E T+QE TD FF TKLFQS LR
Sbjct: 71 EKLTSQECTDIFFNITKLFQSNNERLR 97
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Frame = +2
Query: 482 LCASFVFYRP--DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLS 655
LC +++ D+V++W +E E INS N M+ +HAL +L + DKL+ K+++ S
Sbjct: 173 LCGLNLYFNASCDIVKKWIHEVSECINSKNPMIQFHALTLLCSIKYQDKLALEKIISSYS 232
Query: 656 K--SHIKSPYSLCLLIRLAAQL 715
K S++ + CLLI+ A+ L
Sbjct: 233 KSASNLSGALANCLLIKYASYL 254
>UniRef50_Q8IHR6 Cluster: Coat protein, gamma subunit, putative;
n=6; Plasmodium|Rep: Coat protein, gamma subunit,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1068
Score = 79.0 bits (186), Expect = 1e-13
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +3
Query: 207 FLCDNKTVSVQRNHAARMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALC 386
F K RM+YL IK L +++ IVTSSLTKDM D YRA AIR L
Sbjct: 82 FFSITKLFQSNNERLRRMIYLLIKNLPVSEKEIFIVTSSLTKDMNSANDCYRANAIRVLS 141
Query: 387 SITDASMLQAIERYMKQAIVDKNP 458
I D S+ IERY+K A+VD+NP
Sbjct: 142 KIIDFSLATQIERYLKTAVVDRNP 165
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 10 LKRDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGEN-FT 186
LK D++ N NP++ DK +LQETR F+ + +KC ILTKILYL+N+G++ T
Sbjct: 16 LKEYKNDDEKNFVNPHEG-DKASILQETRVFSSYPLNTQKCLQILTKILYLINKGDDILT 74
Query: 187 TQEATDAFFATTKLFQSKEIMLRVWFIFASKN 282
+QE TD FF+ TKLFQS LR KN
Sbjct: 75 SQECTDIFFSITKLFQSNNERLRRMIYLLIKN 106
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSK-SH-IKSPYSL 685
D+V++W NE E INS + M+ +HAL +L + DKL+ K++ +K SH + S +
Sbjct: 185 DIVKKWINEVSECINSKHPMIQFHALTLLCSIKNQDKLALEKIINSYTKNSHTLSSSLAN 244
Query: 686 CLLIRLAAQL 715
CLLI+ A+ L
Sbjct: 245 CLLIKYASYL 254
>UniRef50_A6R6S2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 886
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMT-GKEDLYRAAAIRALCSITDASMLQAIERYM 431
+MVYL +KEL+ A DVI+ TS + KD + G + LYRA AIRALC I DA+ +QAIER +
Sbjct: 79 QMVYLILKELAGTADDVIMSTSIIMKDTSVGSDVLYRANAIRALCRIIDATTVQAIERLI 138
Query: 432 KQAIVDKNP 458
K AIVDK P
Sbjct: 139 KTAIVDKTP 147
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/67 (47%), Positives = 41/67 (61%)
Frame = +1
Query: 55 YQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTKLFQ 234
Y+ L+ T + R FN + + PRKC +LTKI LL GE F T EAT FF +KLFQ
Sbjct: 12 YERLELTTDIGTARLFNSSPISPRKCRTLLTKIAVLLFTGEKFPTNEATTLFFGISKLFQ 71
Query: 235 SKEIMLR 255
+K+ LR
Sbjct: 72 NKDPSLR 78
Score = 53.6 bits (123), Expect = 5e-06
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 21/93 (22%)
Frame = +2
Query: 512 DLVRRWANEAQETINSD--------------------NAMVSYHALGVLVLSRRNDKLST 631
D+VRRW +EAQE +S N M YHA+G+L R +D+++
Sbjct: 166 DVVRRWQSEAQEAASSSKQSTSFLGFTSGQAHPISQTNYMTQYHAIGLLYQMRAHDRMAL 225
Query: 632 VKLVTRL-SKSHIKSPYSLCLLIRLAAQLCDGD 727
VK+V + +KSP +L LL+RLAAQL D D
Sbjct: 226 VKMVQLYGAAGAVKSPGALVLLVRLAAQLADED 258
>UniRef50_Q7RRK1 Cluster: Coatomer gamma subunit; n=2; Plasmodium
(Vinckeia)|Rep: Coatomer gamma subunit - Plasmodium
yoelii yoelii
Length = 995
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/68 (57%), Positives = 45/68 (66%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IK L ++V IVTSSLTKDM D YRA AIR L D+ + IE+Y+K
Sbjct: 98 RMVYLVIKNLPVSEKEVFIVTSSLTKDMNSSNDCYRANAIRVLSQTIDSILAAQIEKYLK 157
Query: 435 QAIVDKNP 458
AIVDKNP
Sbjct: 158 TAIVDKNP 165
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 RHELKRDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGE- 177
R+ LK ++D NP+ DK +LQETR F+ + + +KC ILTKILYL+N+ E
Sbjct: 13 RNLLKGTGCEDDKFFVNPHSG-DKANILQETRIFSSSPLNVQKCIKILTKILYLINKNET 71
Query: 178 NFTTQEATDAFFATTKLFQSKEIMLRVWFIFASKN 282
N T+QE T+ FF TKLFQS LR KN
Sbjct: 72 NLTSQECTEIFFNITKLFQSNNERLRRMVYLVIKN 106
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 470 CGISLCASFVFYRPDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTR 649
CG++L F+ D+V++W NE E +NS + M+ +HAL +L + NDKL+ K+++
Sbjct: 174 CGLNL---FINTSSDIVKKWTNEITECVNSKHPMIQFHALTLLCSIKYNDKLALEKIISS 230
Query: 650 LSK--SHIKSPYSLCLLIRLAAQL 715
SK S++ + CLLI+ AA L
Sbjct: 231 YSKRSSNLSGSLANCLLIKYAAHL 254
>UniRef50_A1CF77 Cluster: Coatomer subunit gamma, putative; n=13;
Pezizomycotina|Rep: Coatomer subunit gamma, putative -
Aspergillus clavatus
Length = 916
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMT-GKEDLYRAAAIRALCSITDASMLQAIERYM 431
+MVYL +KEL+ A+DVI+ TS + KD G + LYRA AIRALC I DA+ +Q IER +
Sbjct: 81 QMVYLILKELANTAEDVIMSTSIIMKDTAVGSDVLYRANAIRALCRIIDATTVQGIERLI 140
Query: 432 KQAIVDKNP 458
K AIVDK P
Sbjct: 141 KTAIVDKTP 149
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +1
Query: 31 EDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAF 210
+D+++ LD+T V Q+ R FN + + PR+C +LTKI LL GE F T EAT F
Sbjct: 6 KDEDADQVMVKLDRTSVFQDARLFNSSPISPRRCRTLLTKIAVLLFTGEQFPTNEATTLF 65
Query: 211 FATTKLFQSKEIMLR 255
F +KLFQ+K+ LR
Sbjct: 66 FGISKLFQNKDPSLR 80
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +2
Query: 551 INSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSH-IKSPYSLCLLIRLAAQLCDGD 727
I+ N M YHA+G+L R +D+++ VK+V + + +KSP +L LL+RLAA+L + D
Sbjct: 202 ISQSNFMTQYHAIGLLYQMRSHDRMALVKMVQQYGAAGVVKSPAALVLLVRLAAKLAEED 261
>UniRef50_A0DIB1 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 892
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 25 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATD 204
+D+ S PY NL K+ VL E+R FN + +KC IL+K++YL+NQGE F QE+
Sbjct: 24 EDKKALESEPYHNLQKSSVLLESRCFNDPQLQDKKCRQILSKLIYLINQGEKFNDQESLS 83
Query: 205 AFFATTKLFQSKEIMLR 255
FF TKLF S + LR
Sbjct: 84 LFFGITKLFSSNNVDLR 100
Score = 52.8 bits (121), Expect = 8e-06
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = +3
Query: 177 KFHHSGGYGRFLCDNKTVSVQRNHAARMVYLCIKELS--------KLAQDVIIVTSSLTK 332
KF+ F K S RM+YL IK + K + +V S L K
Sbjct: 75 KFNDQESLSLFFGITKLFSSNNVDLRRMIYLMIKVICMVYILQEFKDENSMYVVISCLAK 134
Query: 333 DMTGKEDLYRAAAIRALCSITDASMLQAIERYMKQAIVDKN 455
D+T K DL+R A+R L + D S L ++RY+K AI++K+
Sbjct: 135 DITSKNDLFRINALRTLPYVLDQSNLVQLDRYLKNAILEKS 175
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +2
Query: 452 EPGRQFCGISLCASFVFYR--PDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKL 625
E + +L A +R PD +R+W NE + +NS S+HAL +L + NDK+
Sbjct: 173 EKSQPISSAALIAGLQIFRISPDFIRKWTNEVADRLNSKYPQNSFHALLLLHEIKSNDKV 232
Query: 626 STVKLVTRLSKSHIKSPYSLCLLIRLAAQLCDGD 727
+ K++T L+K + P + +IR ++ + D
Sbjct: 233 TFTKILTGLTKETL-VPIANMQVIRFIREILNTD 265
>UniRef50_Q6C314 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=5; Ascomycota|Rep:
Yarrowia lipolytica chromosome F of strain CLIB122 of
Yarrowia lipolytica - Yarrowia lipolytica (Candida
lipolytica)
Length = 923
Score = 72.1 bits (169), Expect = 1e-11
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = +3
Query: 108 NARYPEKMFINTYENTVFTESRRKFHHSGGYGRFLCDNKTVSVQRNHAARMVYLCIKELS 287
NAR K+ E+ +F +G F+ +K + ++VYL IKEL
Sbjct: 36 NARKCRKLLAKLIHLLTIGETFSEFEATG---LFIAVSKLFPHKDPSLRQIVYLAIKELV 92
Query: 288 KLAQ-DVIIVTSSLTKDMTGKEDL-YRAAAIRALCSITDASMLQAIERYMKQAIVDKN 455
L+ DVI+VTSS+T+D+ G DL Y+ AIRAL + D S +Q IER MK AIVD++
Sbjct: 93 PLSNNDVIMVTSSITRDVQGSSDLIYKPNAIRALARVIDGSFVQGIERLMKTAIVDRH 150
Score = 53.2 bits (122), Expect = 6e-06
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 KDEDDNSSNPYQNLDKTIVLQET-REFNQTLVIPRKCSLILTKILYLLNQGENFTTQEAT 201
K DD S LDK V QE R F ++ + RKC +L K+++LL GE F+ EAT
Sbjct: 7 KKNDDIESGA---LDKMTVYQECQRAFAESPINARKCRKLLAKLIHLLTIGETFSEFEAT 63
Query: 202 DAFFATTKLFQSKEIMLR 255
F A +KLF K+ LR
Sbjct: 64 GLFIAVSKLFPHKDPSLR 81
Score = 42.3 bits (95), Expect = 0.012
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDN---------------AMVSYHALGVLVLSRRNDKLSTVKLVT 646
D +RRWA E QE + S + YHAL +L R +D+++ +KL+
Sbjct: 170 DTIRRWAAEVQEAVTSQKNFPAVTLPNYAPGPAVLAPYHALSLLYELRAHDRMALIKLIQ 229
Query: 647 RLS--KSHIKSPYSLCLLIRLAAQ 712
+ S +H++SP + +LIR A+
Sbjct: 230 QFSGASAHLQSPNANVMLIRFIAK 253
>UniRef50_P87140 Cluster: Probable coatomer subunit gamma; n=1;
Schizosaccharomyces pombe|Rep: Probable coatomer subunit
gamma - Schizosaccharomyces pombe (Fission yeast)
Length = 905
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +1
Query: 25 KDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATD 204
K +DD + + N+++ V Q+ R FN + + PRK +L+KI YL+ GE+F ++AT+
Sbjct: 5 KKDDDGDESIFANVNQVTVTQDARAFNSSSISPRKSRRLLSKIAYLIYTGEHFQEKQATE 64
Query: 205 AFFATTKLFQSKEIMLR 255
FF TKLFQ K+ LR
Sbjct: 65 LFFGITKLFQHKDPSLR 81
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDM-TGKEDLYRAAAIRALCSITDASMLQAIERYM 431
+ VY+ IKELS +A+DVI++TSS+ KD TG+E +YR AIR+L + DA+ + AIER +
Sbjct: 82 QFVYIIIKELSVVAEDVIMITSSIMKDTATGRETIYRPNAIRSLIRVIDANTVPAIERIL 141
Query: 432 KQAIVD 449
IVD
Sbjct: 142 TTGIVD 147
>UniRef50_Q6BZ81 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=6;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 941
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
++VYL IKELS +QD+++VTSS+ KD+ + +Y+ AIR L + D S + A ER K
Sbjct: 85 QLVYLAIKELSATSQDILMVTSSIMKDIQSGDLIYKPNAIRTLSKVLDPSTVSASERLFK 144
Query: 435 QAIVDKNP 458
IVDKNP
Sbjct: 145 NCIVDKNP 152
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 25 KDEDDNSSNPYQNLDKTIVLQET-REFNQTLVIPRKCSLILTKILYLLNQGENFTTQEAT 201
K +D S + DK V QE ++FN + V +KC +L K+L L+ GE F +QE+T
Sbjct: 7 KKQDPYSISSSGLPDKMTVFQECLQQFNASPVNAKKCRQLLAKLLRLIYHGEQFPSQEST 66
Query: 202 DAFFATTKLFQSKEIMLRVWFIFASK 279
FF+ +KLFQ K++ LR A K
Sbjct: 67 TLFFSISKLFQHKDLSLRQLVYLAIK 92
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 557 SDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSK-SHIKSPYSLCLLIRLAAQLCDGD 727
S + M YHALG+L R +DK++ +KL+T LS+ S +K+ S+ LIR ++ D
Sbjct: 210 STSYMYQYHALGLLYQLRNHDKMALMKLITSLSEGSSLKNSLSVIQLIRYINKILTDD 267
>UniRef50_Q5CYL2 Cluster: Coatomer SEC21 gamma subunit like; n=2;
Cryptosporidium|Rep: Coatomer SEC21 gamma subunit like -
Cryptosporidium parvum Iowa II
Length = 936
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
R+VYL IK L + +V SSL KDM D YRA ++R + I D +M+ +ERY+K
Sbjct: 89 RLVYLAIKSLKVNESEAFVVISSLIKDMNSNNDCYRANSLRVISKIADGTMIGQVERYLK 148
Query: 435 QAIVDKN 455
AIVDKN
Sbjct: 149 SAIVDKN 155
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 13 KRDVKDEDDNSS-NPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTT 189
K D+K +D + NP+ +K+ +LQETR F++ + +KC +LTK+L ++N GE T
Sbjct: 8 KMDLKGDDKGVAINPFLG-EKSSILQETRCFSEAHLNSKKCCTVLTKVLNMINSGERLTD 66
Query: 190 QEATDAFFATTKLFQSKEIMLRVWFIFASKN 282
QE +D FF T+LFQS LR A K+
Sbjct: 67 QEWSDLFFGITRLFQSNNQDLRRLVYLAIKS 97
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+ RRW NE E I + MV YHAL +L R ND+L+T K++ L K IKS YS CL
Sbjct: 176 DIPRRWLNEISECIQGRDGMVQYHALVLLFELRNNDRLATQKIIEMLYKMPIKSVYSDCL 235
Query: 692 LIR 700
++R
Sbjct: 236 MLR 238
>UniRef50_Q4N2P9 Cluster: Coatomer gamma subunit, putative; n=2;
Theileria|Rep: Coatomer gamma subunit, putative -
Theileria parva
Length = 927
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
R++YL IK L ++ IVTSSLTKDM + +YRA AIR++C I ++ IERY+K
Sbjct: 83 RLIYLLIKLLPVNETEIFIVTSSLTKDMNSQNYVYRANAIRSICYIMKGAVSPQIERYLK 142
Query: 435 QAIVDKNP 458
++VDK P
Sbjct: 143 SSLVDKQP 150
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 RDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQG-ENFTTQ 192
RD+K + S + N DK + Q+ R F++ + +KC+ +LTKIL +L+ G E +
Sbjct: 3 RDLKSRLEGSKPAFVN-DKNSIFQDVRIFSKVPINSKKCAKVLTKILSMLSCGNEKLSET 61
Query: 193 EATDAFFATTKLFQSKEIMLR 255
E+T+ FF T+LF++ + LR
Sbjct: 62 ESTEIFFGVTRLFEADDERLR 82
Score = 39.5 bits (88), Expect = 0.082
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
++++RW +E +++ + MV +HA +L + R NDK S KLV+ L + +C
Sbjct: 169 EMLKRWFSEITTCLSNKSEMVRFHATILLFILRYNDKQSIRKLVSMLEDD---GEHVICF 225
Query: 692 LIR 700
+IR
Sbjct: 226 IIR 228
>UniRef50_Q382Z1 Cluster: Coatomer gamma subunit, putative; n=3;
Trypanosoma|Rep: Coatomer gamma subunit, putative -
Trypanosoma brucei
Length = 878
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/85 (41%), Positives = 47/85 (55%)
Frame = +1
Query: 1 RHELKRDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGEN 180
+H+ R +EDD S P+ ++K VLQ+ R FN + C LT+ LYL+ G
Sbjct: 2 QHDRDRYDSEEDDEESLPFDGIEKASVLQQCRVFNDVQLDISACLRCLTECLYLIYTGTT 61
Query: 181 FTTQEATDAFFATTKLFQSKEIMLR 255
FT EAT+ FF +TKL QS LR
Sbjct: 62 FTEAEATELFFMSTKLLQSNRSRLR 86
Score = 40.7 bits (91), Expect = 0.036
Identities = 18/83 (21%), Positives = 40/83 (48%)
Frame = +3
Query: 207 FLCDNKTVSVQRNHAARMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALC 386
F K + R+ R+ Y+ +KELS + I ++SL D + + +R LC
Sbjct: 71 FFMSTKLLQSNRSRLRRLHYVLMKELSPFVEQSFIASNSLMGDTKSNNESNKRNGMRTLC 130
Query: 387 SITDASMLQAIERYMKQAIVDKN 455
+ + S+ ++R + +++ ++
Sbjct: 131 KVMNPSLYPLLDRTIVESLTSRS 153
Score = 38.7 bits (86), Expect = 0.14
Identities = 15/69 (21%), Positives = 37/69 (53%)
Frame = +2
Query: 509 PDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLC 688
PDL R+W+ + E I Y + ++ + R++D+++ + + ++ ++SP +L
Sbjct: 172 PDLARKWSTQLNEAIRV-LGNTQYLTVAIMHIIRKSDRVTVKRFIEQVRNGVVRSPLALS 230
Query: 689 LLIRLAAQL 715
L++L +
Sbjct: 231 FLVKLTTDV 239
>UniRef50_A7ATJ0 Cluster: Adaptin N terminal region family protein;
n=1; Babesia bovis|Rep: Adaptin N terminal region family
protein - Babesia bovis
Length = 923
Score = 67.7 bits (158), Expect = 3e-10
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
R+VYL IK + ++ IVTSSLTKD+ +YRA AIRA+C + +++ +ERY+K
Sbjct: 83 RLVYLLIKSIKASETEIFIVTSSLTKDVNSSNHIYRANAIRAMCLVVKSNVASQVERYIK 142
Query: 435 QAIVDKN 455
++VD +
Sbjct: 143 SSLVDND 149
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 482 LCASFVFYR-PDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSK 658
LC +F + P VRRW +EA +N+ N MV +H ++ L R NDK S KLVT +SK
Sbjct: 158 LCCIRIFTQMPQAVRRWVSEASTCLNNTNKMVQFHGTLMMCLVRLNDKQSLRKLVTNVSK 217
Query: 659 SHIKSPYSLCLLIRLAA 709
S + ++ C +IR A
Sbjct: 218 SGM-GQHTECFIIRFVA 233
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 DKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQG-ENFTTQEATDAFFATTKLFQSKE 243
DK VLQE + F++ + +KC +TKILYL+ +G E T E+T+ FF T+LF+S +
Sbjct: 19 DKNAVLQEAKVFSKVPINSKKCIAAITKILYLITKGKETLTEVESTEVFFGATRLFESND 78
Query: 244 IMLR 255
LR
Sbjct: 79 ERLR 82
>UniRef50_P32074 Cluster: Coatomer subunit gamma; n=6;
Saccharomycetales|Rep: Coatomer subunit gamma -
Saccharomyces cerevisiae (Baker's yeast)
Length = 935
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +3
Query: 207 FLCDNKTVSVQRNHAARMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALC 386
F +K Q + + VYL IKELS +++DV++ TSS+ KD+ DL + AIR+L
Sbjct: 67 FFSISKLFQHQNDPLRQAVYLAIKELSGISEDVLMATSSIMKDVQNGSDLIKPDAIRSLT 126
Query: 387 SITDASMLQAIERYMKQAIVDKNP 458
+ D S + ER +K A+V ++P
Sbjct: 127 YVLDESTAFSAERLLKSAVVSRHP 150
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 DKTIVLQETRE-FNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTKLFQSKE 243
DK + Q+ FN++ V ++C L+++++L LL QGE F EAT FF+ +KLFQ +
Sbjct: 19 DKMTIYQDCMNTFNESPVNSKRCRLLISRLLRLLAQGETFPQNEATALFFSISKLFQHQN 78
Query: 244 IMLR 255
LR
Sbjct: 79 DPLR 82
>UniRef50_Q4Q800 Cluster: Coatomer gamma subunit, putative; n=3;
Leishmania|Rep: Coatomer gamma subunit, putative -
Leishmania major
Length = 865
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 28 DEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDA 207
D++++ + P++ LDK LQE R FN+ + +T++LYLL+ G T EATD
Sbjct: 10 DDEEDDALPFEGLDKASALQECRVFNKIPLDEEGSIRAMTQVLYLLSIGVRLTEAEATDI 69
Query: 208 FFATTKLFQSKEIMLR 255
FF +TKL QS LR
Sbjct: 70 FFMSTKLMQSNYAKLR 85
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 225 TVSVQRNHAA--RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD 398
T +Q N+A R+ Y+ +KELS L + I +++L D+ K D +++AIRAL +I D
Sbjct: 74 TKLMQSNYAKLRRLQYILMKELSPLVEQSFIASNALMTDIKKKGDSDKSSAIRALYAIMD 133
Query: 399 ASMLQAIERYMKQAIVDKNP 458
+SM +++R + + + +NP
Sbjct: 134 SSMYNSMDRTIVECMTSRNP 153
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +2
Query: 509 PDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLC 688
P++ R+WA + E + + + Y A+ +L R ND+LS +L+ ++S ++C
Sbjct: 171 PEMPRKWATQLNEVLR-ERSKAQYPAIALLHKIRNNDRLSVDRLIEDAQAGRVRSSLAVC 229
Query: 689 LLIRLAAQLCDGD 727
++I++ +L D
Sbjct: 230 IIIKMCTELMQDD 242
>UniRef50_Q1EQ36 Cluster: Gamma1-COP; n=1; Entamoeba
histolytica|Rep: Gamma1-COP - Entamoeba histolytica
Length = 844
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 VKDEDDNSSNPYQNL--DKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQE 195
V D++DN Q + DK ++ Q+ + + +C L LTK++ + N+G+ FT +E
Sbjct: 3 VYDDEDNIGVLEQTIFPDKGVLYQQRIVCAEQKINLVQCRLFLTKLIAVFNRGDTFTQEE 62
Query: 196 ATDAFFATTKLFQSKEIMLR 255
AT+ FFATTKLF S + LR
Sbjct: 63 ATELFFATTKLFYSPNVPLR 82
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
++++ ++ + A DV +V +SL+KD T D R++A+R L I + ++ER+ K
Sbjct: 83 QLLFTALRSVIPYACDVFVVMNSLSKDATSTYDFQRSSALRTLGMILTDQTINSLERHYK 142
Query: 435 QAIVDKNP 458
Q IVDK P
Sbjct: 143 QGIVDKIP 150
>UniRef50_A2FC64 Cluster: Nonclathrin coat protein gamma-like
protein, putative; n=4; Trichomonas vaginalis G3|Rep:
Nonclathrin coat protein gamma-like protein, putative -
Trichomonas vaginalis G3
Length = 403
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
R++ L +K++ D II+T SL+KD+ G+ + + AIR LCS+ DA+ +E+++K
Sbjct: 79 RLLILLLKQIKIKPHDAIIITHSLSKDINGEVAMTQGHAIRCLCSLLDANSALTLEKFLK 138
Query: 435 QAIVDKNP 458
AI NP
Sbjct: 139 PAISSNNP 146
Score = 37.9 bits (84), Expect = 0.25
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 506 RPDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSL 685
R D V RW E ++ NS V +HAL +L R +D ++ +L + L S KS
Sbjct: 164 RKDAVLRWLYEIRQASNSTQRSVRFHALLLLHALRSDDLHASAQLSSTLEPS--KSILEQ 221
Query: 686 CLLIRLAAQ 712
C+ I +A Q
Sbjct: 222 CIQISIATQ 230
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = +1
Query: 43 SSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATT 222
S++P ++++ + ++ ++R F + KC + IL G FT +E T+ FF+ T
Sbjct: 9 STDP-KDINTSAIINKSRVFRDVTLDLSKCRAAMIAILQATAIGVQFTDKEQTELFFSLT 67
Query: 223 KLFQSKE 243
+L +++
Sbjct: 68 QLMHNQD 74
>UniRef50_Q1EQ35 Cluster: Gamma2-COP; n=2; Entamoeba
histolytica|Rep: Gamma2-COP - Entamoeba histolytica
Length = 848
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +1
Query: 19 DVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEA 198
DV D ++ Y ++K ++ Q+ + T + KC LT+I+ +N+G+ F +E+
Sbjct: 9 DVDDYSVMENDLY--IEKVLLFQQRECCSATHINVPKCKKFLTRIVAAMNKGDIFNDEES 66
Query: 199 TDAFFATTKLFQSKEIMLR 255
T+ FFA TKLF SK++ +R
Sbjct: 67 TEIFFALTKLFMSKDLTMR 85
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/67 (31%), Positives = 42/67 (62%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
R++Y+ + ++ L + I+ +S++KD++ K D +R +++R L + + AIER+ K
Sbjct: 86 RLLYVVLNDMIPLTSNSFIIVNSVSKDLSDKIDSFRCSSLRCLSRLMTPQIAPAIERFFK 145
Query: 435 QAIVDKN 455
Q +VD N
Sbjct: 146 QTLVDSN 152
Score = 39.9 bits (89), Expect = 0.062
Identities = 21/68 (30%), Positives = 40/68 (58%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+++ E ++S NA+V YHA + ++ND+ S ++ +T + + I S ++
Sbjct: 169 DIVQKYLPEINSCVDSPNALVQYHATRLFFYVKQNDQHSLLRFITTKATT-ITSCFAQME 227
Query: 692 LIRLAAQL 715
LIR A +L
Sbjct: 228 LIRTALKL 235
>UniRef50_UPI00006CC124 Cluster: Adaptin N terminal region family
protein; n=1; Tetrahymena thermophila SB210|Rep: Adaptin
N terminal region family protein - Tetrahymena
thermophila SB210
Length = 992
Score = 40.3 bits (90), Expect = 0.047
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 RMVYLCIKELSKLA-QDVIIVTSSLTKDMTGKED-LYRAAAIRALCSITDASMLQAIERY 428
++VYL I SK D I+V S KD+ K++ + RA A+R + + S+ Q +
Sbjct: 66 KLVYLYIINYSKTKPDDAIMVVSQFDKDIKNKQNPILRALAVRTMGCVRVPSINQYLAEP 125
Query: 429 MKQAIVDKNP 458
+K+A+VD P
Sbjct: 126 LKEALVDPEP 135
>UniRef50_A2FU96 Cluster: Adaptin N terminal region family protein;
n=1; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 724
Score = 40.3 bits (90), Expect = 0.047
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 RMVYLCIKELS-KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYM 431
RMVY + ++ K + I+VT+SL KD + + A+RA+C I A+M + + +
Sbjct: 63 RMVYTILTSIACKDPETSILVTNSLLKDCSSNNPIVCGMALRAICDIKVATMADELPKII 122
Query: 432 KQAIVDKNP 458
+ + NP
Sbjct: 123 AIGLANSNP 131
>UniRef50_Q5AF24 Cluster: Potential clathrin-associated protein AP-1
complex component; n=6; Saccharomycetales|Rep: Potential
clathrin-associated protein AP-1 complex component -
Candida albicans (Yeast)
Length = 775
Score = 36.7 bits (81), Expect = 0.58
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 KTVSVQRNHAARMVYLCIKELSKLAQDV-IIVTSSLTKDMTGKEDLYRAAAIRALCSITD 398
K ++ ++VYL + +K ++ I+ ++ +D L RA AIR + I
Sbjct: 77 KNIATYDLEQKKLVYLYLMNYAKTNPELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRV 136
Query: 399 ASMLQAIERYMKQAIVDKNP 458
A M++ +E +++ + D+NP
Sbjct: 137 AKMVEYLEIPLQRTLADENP 156
>UniRef50_Q1FEP5 Cluster: Lipolytic enzyme, G-D-S-L; n=1;
Clostridium phytofermentans ISDg|Rep: Lipolytic enzyme,
G-D-S-L - Clostridium phytofermentans ISDg
Length = 357
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKS 661
D+ + +A + +NSD +MVSY G++ NDK T+++V + +S
Sbjct: 164 DVTKAYAYLTSKALNSDYSMVSYSGYGIVSGYTENDKKDTIQIVPKYYQS 213
>UniRef50_Q9E948 Cluster: RNA polymerase; n=17; Flexiviridae|Rep: RNA
polymerase - Apple stem pitting virus
Length = 2185
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 467 FCGISLCASFVFYRPDLVRRWANEAQETINSDNAMVSY 580
FCG LC VF +PDLV A+ET N +N + +Y
Sbjct: 2091 FCGWGLCEHGVFKKPDLVLERLQIARETRNLENCIDNY 2128
>UniRef50_A5KA22 Cluster: Adapter-related protein complex 4 beta 1
subunit, putative; n=10; Eukaryota|Rep: Adapter-related
protein complex 4 beta 1 subunit, putative - Plasmodium
vivax
Length = 909
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVT-SSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYM 431
+M+YL + ++ ++ ++T ++L KD + + R A+R+ C++ ++ + IE +
Sbjct: 71 KMIYLYLNNYAETNSELSLLTINTLQKDSKDDDPIIRGLALRSFCNLRINNLFEYIEGPL 130
Query: 432 KQAIVDKN 455
+ DKN
Sbjct: 131 FNGLNDKN 138
>UniRef50_Q49XL1 Cluster: Uncharacterized protein SSP1341; n=35;
Bacillales|Rep: Uncharacterized protein SSP1341 -
Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 /DSM 20229)
Length = 263
Score = 34.3 bits (75), Expect = 3.1
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Frame = +3
Query: 273 IKELSKLAQDV----IIVTSSLTKDMTGKEDLYR-AAAIRALCSITDASMLQAIERYMKQ 437
IK+ S+L+ D+ II + + MT + + AA+IRAL ++D + + IER +++
Sbjct: 181 IKQQSQLSDDIMIQKIIKFNEDLRTMTKQGQISEEAASIRALIDLSDLATIMPIERAIQR 240
Query: 438 AIVDK 452
I+DK
Sbjct: 241 TIIDK 245
>UniRef50_A2EVJ9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 993
Score = 33.9 bits (74), Expect = 4.1
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 105 SNARYPEKMFINTYENTVFT-ESRRKFHHSGGYGRFLCDNKTVSVQRNHAARMVYLCIKE 281
S R EK+F+ + VFT +S +F+H Y F CD +T S+ + ++ CIK
Sbjct: 368 SERRNIEKVFVIDDSDYVFTGDSFTEFNHQDKYESFCCDKRTKSISQE--IQVTEDCIK- 424
Query: 282 LSKLAQDVIIVTSSL 326
S ++ D + + +S+
Sbjct: 425 TSTISVDGLEIQNSI 439
>UniRef50_Q5KDA3 Cluster: Clathrin binding protein, putative; n=2;
Filobasidiella neoformans|Rep: Clathrin binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 755
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQD-VIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYM 431
++VYL + +K + VI+ ++ KD L RA AIR + + +L + +
Sbjct: 63 KLVYLYLMNYAKTQPELVILAVNTFVKDTADPNPLVRALAIRTMSILRAEKILDYLASPL 122
Query: 432 KQAIVDKNP 458
+ + D+NP
Sbjct: 123 SRCLKDENP 131
>UniRef50_Q5KJI7 Cluster: Golgi to vacuole transport-related
protein, putative; n=1; Filobasidiella neoformans|Rep:
Golgi to vacuole transport-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 835
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 222 KTVSVQRNHAARMVYLCIKELSKLAQDVIIVT-SSLTKDMTGKEDLYRAAAIRALCSITD 398
K V Q ++VY+ + + D+++++ ++ KD++ L R+ ++R L SI
Sbjct: 83 KNVVSQSIEIRKLVYIYLLRFASTNSDLVLLSINTFQKDLSDPSPLIRSMSLRVLTSIRV 142
Query: 399 ASMLQAIERYMKQAIVDKNP 458
+ I +K+ + D+NP
Sbjct: 143 PVIQGIIMLGLKKLVNDRNP 162
>UniRef50_Q6NFW6 Cluster: Putative membrane protein; n=1;
Corynebacterium diphtheriae|Rep: Putative membrane
protein - Corynebacterium diphtheriae
Length = 557
Score = 33.1 bits (72), Expect = 7.2
Identities = 19/63 (30%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -2
Query: 463 TAGFLSTIACFIYRSIAC-SIEASVMLHNALIAAARYRSSLPVMSLVKEEVTMITSCANL 287
TAG + T+ IYRS+A + ++++ IA A S++P++ L+ +++ ++ ANL
Sbjct: 313 TAGII-TLYPAIYRSLAIVDVTPNIVVRALAIAIAADISTMPIVMLMSGKISAVSVLANL 371
Query: 286 LSS 278
L++
Sbjct: 372 LAA 374
>UniRef50_Q5CYA4 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 554
Score = 33.1 bits (72), Expect = 7.2
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 332 FSQRGSHYDHILRQFTQFFDAKINHTRSMISL 237
+SQ+G HYDH R F + +D +++ T +S+
Sbjct: 400 YSQKGVHYDHSNRHFQRHYDNQLSQTHRDLSI 431
>UniRef50_A2ER45 Cluster: Adaptin N terminal region family protein;
n=1; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 800
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDV-IIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYM 431
R+VY+ I S ++ I+ S++ KD L R+ AIR++ I + + I +
Sbjct: 67 RLVYIYILTYSTSEEEESIMAVSAMLKDSEHYNPLVRSLAIRSMTKIKIEAFAENIIAQV 126
Query: 432 KQAIVDKNP 458
K+++ DK+P
Sbjct: 127 KKSLQDKDP 135
>UniRef50_A7TZR7 Cluster: Replicase; n=1; Coleus vein necrosis
virus|Rep: Replicase - Coleus vein necrosis virus
Length = 1977
Score = 32.7 bits (71), Expect = 9.5
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 467 FCGISLCASFVFYRPDLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVT 646
FCG +LC+ ++ +P LV A+ET N + + +Y A+ V R ++K +
Sbjct: 1883 FCGWNLCSDGIYKKPQLVLERLCIAKETNNLTSCIDNY-AIEVSYAYRMSEKAT-----M 1936
Query: 647 RLSKSHIKSPYSLCLLI 697
R+S+ + S Y+ CL I
Sbjct: 1937 RMSEEELDSHYN-CLRI 1952
>UniRef50_A2BSE1 Cluster: Predicted dehydrogenase; n=1;
Prochlorococcus marinus str. AS9601|Rep: Predicted
dehydrogenase - Prochlorococcus marinus (strain AS9601)
Length = 400
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 201 GRFLCDNKTVSVQRNHAARMVYLCIKELSKLAQDVIIVTSSLTKDMTGK 347
GR LC +K V++ NH L ++ KL D+II T+ L D K
Sbjct: 167 GRILCSSKVVNI--NHHNEYKELVLQNGDKLCGDIIISTAGLYSDKISK 213
>UniRef50_Q4PGA6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 919
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 392 DAAQRSYCGRPVQILFTGHVFSQRGSHYDHILRQFTQF 279
DAA SY G P+Q +G V+++RG+ Y L QF+ +
Sbjct: 742 DAALNSYTGSPLQQAASGLVYTKRGA-YQETLGQFSSY 778
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,806,866
Number of Sequences: 1657284
Number of extensions: 12160199
Number of successful extensions: 31872
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 30907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31854
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -