Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20173
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 120 2e-27
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 120 2e-27
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 120 2e-27
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 120 2e-27
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 120 2e-27
L31852-1|AAA21090.1| 962|Drosophila melanogaster bcop protein. 32 0.92
AF145656-1|AAD38631.1| 964|Drosophila melanogaster BcDNA.GH0931... 32 0.92
AE014298-2708|AAF48830.2| 964|Drosophila melanogaster CG6223-PA... 32 0.92
AE014296-1310|AAF50522.2| 972|Drosophila melanogaster CG8492-PA... 29 8.6
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 120 bits (289), Expect = 2e-27
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +MLQA+ERYMK
Sbjct: 91 RMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTMLQAVERYMK 150
Query: 435 QAIVDKN 455
Q IVDKN
Sbjct: 151 QCIVDKN 157
Score = 105 bits (252), Expect = 6e-23
Identities = 50/70 (71%), Positives = 57/70 (81%)
Frame = +1
Query: 46 SNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTK 225
SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 226 LFQSKEIMLR 255
LFQSK+++LR
Sbjct: 81 LFQSKDVVLR 90
Score = 93.1 bits (221), Expect = 4e-19
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+RWANEAQE +NSDN MV YHALG+L R++D+L+ KLV +L++ +KSPY++C+
Sbjct: 177 DVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCM 236
Query: 692 LIRLAAQLCD 721
LIR+A +L +
Sbjct: 237 LIRIACKLIE 246
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 120 bits (289), Expect = 2e-27
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +MLQA+ERYMK
Sbjct: 86 RMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTMLQAVERYMK 145
Query: 435 QAIVDKN 455
Q IVDKN
Sbjct: 146 QCIVDKN 152
Score = 115 bits (276), Expect = 8e-26
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +1
Query: 13 KRDVKDEDDNSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQ 192
+R+ DE+D SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +
Sbjct: 5 RREKDDEEDGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAR 64
Query: 193 EATDAFFATTKLFQSKEIMLR 255
EATD FFA TKLFQSK+++LR
Sbjct: 65 EATDCFFAMTKLFQSKDVVLR 85
Score = 93.1 bits (221), Expect = 4e-19
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+RWANEAQE +NSDN MV YHALG+L R++D+L+ KLV +L++ +KSPY++C+
Sbjct: 172 DVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCM 231
Query: 692 LIRLAAQLCD 721
LIR+A +L +
Sbjct: 232 LIRIACKLIE 241
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 120 bits (289), Expect = 2e-27
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +MLQA+ERYMK
Sbjct: 87 RMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTMLQAVERYMK 146
Query: 435 QAIVDKN 455
Q IVDKN
Sbjct: 147 QCIVDKN 153
Score = 110 bits (265), Expect = 2e-24
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 KRDVKDEDD-NSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTT 189
+R+ DE+D SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE
Sbjct: 5 RREKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVA 64
Query: 190 QEATDAFFATTKLFQSKEIMLR 255
+EATD FFA TKLFQSK+++LR
Sbjct: 65 REATDCFFAMTKLFQSKDVVLR 86
Score = 93.1 bits (221), Expect = 4e-19
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+RWANEAQE +NSDN MV YHALG+L R++D+L+ KLV +L++ +KSPY++C+
Sbjct: 173 DVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCM 232
Query: 692 LIRLAAQLCD 721
LIR+A +L +
Sbjct: 233 LIRIACKLIE 242
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 120 bits (289), Expect = 2e-27
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +MLQA+ERYMK
Sbjct: 91 RMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTMLQAVERYMK 150
Query: 435 QAIVDKN 455
Q IVDKN
Sbjct: 151 QCIVDKN 157
Score = 105 bits (252), Expect = 6e-23
Identities = 50/70 (71%), Positives = 57/70 (81%)
Frame = +1
Query: 46 SNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTTQEATDAFFATTK 225
SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE +EATD FFA TK
Sbjct: 21 SNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTK 80
Query: 226 LFQSKEIMLR 255
LFQSK+++LR
Sbjct: 81 LFQSKDVVLR 90
Score = 93.1 bits (221), Expect = 4e-19
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+RWANEAQE +NSDN MV YHALG+L R++D+L+ KLV +L++ +KSPY++C+
Sbjct: 177 DVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCM 236
Query: 692 LIRLAAQLCD 721
LIR+A +L +
Sbjct: 237 LIRIACKLIE 246
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 120 bits (289), Expect = 2e-27
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +3
Query: 255 RMVYLCIKELSKLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAIERYMK 434
RMVYL IKELS +A+DVIIVTSSLTKDMTGKEDLYRAAAIRALCSITD +MLQA+ERYMK
Sbjct: 87 RMVYLGIKELSSIAEDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDNTMLQAVERYMK 146
Query: 435 QAIVDKN 455
Q IVDKN
Sbjct: 147 QCIVDKN 153
Score = 110 bits (265), Expect = 2e-24
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 KRDVKDEDD-NSSNPYQNLDKTIVLQETREFNQTLVIPRKCSLILTKILYLLNQGENFTT 189
+R+ DE+D SN YQNL+KT VLQETR FN+T V PRKC ILTKILYL+NQGE
Sbjct: 5 RREKDDEEDAGPSNAYQNLEKTSVLQETRTFNETPVNPRKCIHILTKILYLINQGEQLVA 64
Query: 190 QEATDAFFATTKLFQSKEIMLR 255
+EATD FFA TKLFQSK+++LR
Sbjct: 65 REATDCFFAMTKLFQSKDVVLR 86
Score = 93.1 bits (221), Expect = 4e-19
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 512 DLVRRWANEAQETINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSHIKSPYSLCL 691
D+V+RWANEAQE +NSDN MV YHALG+L R++D+L+ KLV +L++ +KSPY++C+
Sbjct: 173 DVVKRWANEAQEALNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRGSLKSPYAVCM 232
Query: 692 LIRLAAQLCD 721
LIR+A +L +
Sbjct: 233 LIRIACKLIE 242
>L31852-1|AAA21090.1| 962|Drosophila melanogaster bcop protein.
Length = 962
Score = 31.9 bits (69), Expect = 0.92
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 288 KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 419
KL Q++I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 91 KLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPL 134
>AF145656-1|AAD38631.1| 964|Drosophila melanogaster BcDNA.GH09317
protein.
Length = 964
Score = 31.9 bits (69), Expect = 0.92
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 288 KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 419
KL Q++I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 91 KLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPL 134
>AE014298-2708|AAF48830.2| 964|Drosophila melanogaster CG6223-PA
protein.
Length = 964
Score = 31.9 bits (69), Expect = 0.92
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 288 KLAQDVIIVTSSLTKDMTGKEDLYRAAAIRALCSITDASMLQAI 419
KL Q++I+V + KD+ + R + +R LC + + +L+ +
Sbjct: 91 KLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPL 134
>AE014296-1310|AAF50522.2| 972|Drosophila melanogaster CG8492-PA
protein.
Length = 972
Score = 28.7 bits (61), Expect = 8.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 548 TINSDNAMVSYHALGVLVLSRRNDKLSTVKLVTRLSKSH 664
+I S+N +SYH L S+ ND L T T K H
Sbjct: 901 SIYSNNPPISYHTLNYKHSSKHNDSLLTNNSATAHDKIH 939
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,665,004
Number of Sequences: 53049
Number of extensions: 572079
Number of successful extensions: 1417
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -