Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20172
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 50 1e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 5e-05
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 41 7e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.014
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.019
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 36 0.019
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.025
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.057
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.076
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.18
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.31
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.40
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.53
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.71
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.93
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 31 0.93
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.93
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.6
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.6
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39) 29 3.8
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 29 3.8
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.8
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 5.0
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07) 28 5.0
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.0
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.0
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 6.6
SB_28301| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 8.7
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 27 8.7
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 27 8.7
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 8.7
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 27 8.7
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 8.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 98.7 bits (235), Expect = 3e-21
Identities = 48/80 (60%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = +3
Query: 258 VSKNAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 434
+SK A APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN I
Sbjct: 22 ISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCI 81
Query: 435 RYFPTQALNFAFKDKYKQVF 494
RYFPTQALNFAFKD+ K +F
Sbjct: 82 RYFPTQALNFAFKDQVKALF 101
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +3
Query: 345 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 497
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +3
Query: 255 AVSKNAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 434
AVS+ +V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 435 RYFPTQALNFAFKDKYKQ 488
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +3
Query: 249 LRAVSKNAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 428
L VS+ A AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN AN
Sbjct: 146 LAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGAN 199
Query: 429 VIRYFPTQALNFAFKDKYKQV 491
VI+ P + F +K K++
Sbjct: 200 VIKIAPESGIKFFAYEKAKKL 220
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/79 (24%), Positives = 42/79 (53%)
Frame = +3
Query: 261 SKNAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 440
S+ ++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 441 FPTQALNFAFKDKYKQVFL 497
P ++ A + K +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 VSKNAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 413
+SK A APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 23 ISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 303 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 467
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 273 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 446
V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + + FP
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLGLFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +3
Query: 273 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 452
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 453 ALNF 464
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 345 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 464
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +3
Query: 252 RAVSKNAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 431
+A AV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG +
Sbjct: 924 KATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQL 981
Query: 432 IRYFPTQALNFAFKDKYKQVF 494
+ P +A+ D + +F
Sbjct: 982 LGVSPEKAIKLTTNDFVRGIF 1002
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 345 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 488
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 330 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 494
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 348 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 497
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 270 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 449
A P++ K +Q + I YKG +D RI + +G+ + W+G R P
Sbjct: 110 ASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 450 QALNFAFKDKYKQV---FLGG 503
L F F ++ + F GG
Sbjct: 167 TVLTFIFLEQLNRAANYFYGG 187
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 357 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 491
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 273 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 416
V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 276 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 416
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 360 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 485
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 279 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 458
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 459 NFAFKDKYKQV 491
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 258 VSKNAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 416
+SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 34.3 bits (75), Expect = 0.076
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 234 PGWRYLRAVSKNAVA-----PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 398
P WR++ + VA P++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 399 LSFWRGNFANVIRYFP 446
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 378 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 491
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 279 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 455
P++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 378 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 491
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Frame = +3
Query: 255 AVSKNAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQGLLSF 407
++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G+ +
Sbjct: 26 SIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGMKTM 85
Query: 408 WRGNFANVIRYFPTQALNFAFKDKYKQVF 494
++G + R ++ D+ K ++
Sbjct: 86 YKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 279 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 458
P++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 459 NF 464
F
Sbjct: 99 TF 100
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 583 KHREVAPAAPPEPDYQEVTPELRLLSTPP 497
K ++ P PPEPDY E TP PP
Sbjct: 206 KQQKATPVNPPEPDYLEPTPPPPAAPAPP 234
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 254 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 120
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +2
Query: 185 RTKCRTSPIRSRSLRTSWLAVSPRRLQERRSTNRACQAAAPSTARQQADRRRPALQGYRR 364
RT+ R + R R + V+ RR +RR T A T+R+Q DRRR Q RR
Sbjct: 85 RTRARVTSRRQVDRRRTRARVTIRRQVDRRRTR------ARVTSRRQVDRRRTRAQVTRR 138
Query: 365 R 367
R
Sbjct: 139 R 139
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 185 RTKCRTSPIRSRSLRTSWLAVSPRRLQERRSTNRACQAAAPSTARQQADRRRPALQGYRR 364
RT+ R + R R + V+ RR +RR T A T R+Q DRRR + RR
Sbjct: 100 RTRARVTIRRQVDRRRTRARVTSRRQVDRRRTR------AQVTRRRQVDRRRTRARVTRR 153
Query: 365 R 367
R
Sbjct: 154 R 154
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 261 SKNAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 419
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 267 NAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 416
+A+A P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 129 SAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 270 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 446
AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G +I P
Sbjct: 222 AVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVIAP 277
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 273 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 446
+ P++RVK +LQ++ + Y G VD RI +E G+ ++G +R P
Sbjct: 155 LTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRDIP 208
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +3
Query: 279 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 458
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 459 NFA 467
F+
Sbjct: 117 LFS 119
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 446
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 254 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 120
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 270 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 449
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 450 QALNFAFKDKYKQVF--LGGVE 509
Q L+F + ++ LGG +
Sbjct: 66 QTLHFTVYEYARKALNPLGGYD 87
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 354 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 491
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 400
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 400
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39)
Length = 1037
Score = 28.7 bits (61), Expect = 3.8
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Frame = +2
Query: 2 GTRERDRSNFKKGTHLPSV---LP*LRNYSKSPVQKSGVSVS*SPIRVCRNSHLDIFT** 172
GT D + ++G SV +P RN + PV ++ + + NS ++
Sbjct: 708 GTASADGRSQREGAAADSVEPAIPEWRNLKEVPVPSLTNNLLKNLPKNLANSIKNLHRRA 767
Query: 173 RSHNRT-KCRTSPIRSRSLRTSWLAVSPRRLQERRSTNRACQAAAPSTARQQADRRRPAL 349
RT + TSP+ SRS + ++ +ER ++ R C AAA + ++A AL
Sbjct: 768 NHEPRTARDPTSPLTSRSRKALGKVEPNQQSEERGASCRRCAAAAGNPGAERA-AAGTAL 826
Query: 350 QGYRRRLR 373
R RLR
Sbjct: 827 ARRRCRLR 834
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 227 RTSWLAVSPRRLQERRSTNRACQAAAPSTARQQADRRRPAL 349
+T+ +AV L RRS +A P+T R+ + RP L
Sbjct: 337 KTAKIAVKTNNLLRRRSVAVTAPSAKPNTTRRMSTASRPTL 377
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 400
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 381 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 497
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 400
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
Length = 1118
Score = 28.3 bits (60), Expect = 5.0
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 2 GTRERD--RSNFKKGTHLPSVLP*LRNYSKSPVQKSGVSVS*SPIRVCRNSHLDIFT**R 175
G+ E+D + K + P VLP L + S +K + S C+ H + R
Sbjct: 393 GSSEKDVQQEPLKAQSEDPEVLPELEDQVSSDSRKD--TTDRSQDTPCQAPHPESPV--R 448
Query: 176 SHNRTKCRTSPIRSRSLRTSWLAVSPRRLQERRSTNRACQAAAPSTARQQADRRR 340
+H T + S L SPRRL++ + + A+P+ R ++ R R
Sbjct: 449 THPSTSLKESTASMHRDNADTLRDSPRRLRDMSTKSTDKLKASPTKLRNKSTRMR 503
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 378 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 494
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 378 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 491
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +3
Query: 279 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 458
P E VK LQ+ + AA Y+G +D + K G+L +RG + + P ++
Sbjct: 60 PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115
Query: 459 NFA 467
FA
Sbjct: 116 RFA 118
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 27 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 170
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_28301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 583 KHREVAPAAPPEPDYQEVTPELRLLS 506
KH E PAAP +P Y +T L S
Sbjct: 65 KHSEKTPAAPQQPHYNNLTATTLLTS 90
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 75 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 185
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 173 RSHNRTKCRTSPIRSRSLRTSWLAVSPRRLQERRSTNR 286
R + + + SP+R+RS R + SPR + RRS++R
Sbjct: 436 RRDSSLRRQRSPLRNRSPRWRGRSPSPRSRRRRRSSDR 473
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 246 YLRAVSKNAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 425
++R V + P+ + LQ QH ++ + + +D +IPKE + +FW+
Sbjct: 416 FIRGVVDSDDLPLNVSREQLQ-QHKLLKVIKKKLVRKALDMIKKIPKEDYMATFWKEYST 474
Query: 426 NV 431
N+
Sbjct: 475 NI 476
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 400
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 27.5 bits (58), Expect = 8.7
Identities = 28/118 (23%), Positives = 40/118 (33%)
Frame = +2
Query: 191 KCRTSPIRSRSLRTSWLAVSPRRLQERRSTNRACQAAAPSTARQQADRRRPALQGYRRRL 370
K +T P A PR+ R +R QAA P + RP Q R
Sbjct: 212 KTKTKPQDQDQAARPSQAARPRQAARPRQASRPRQAARPRQRERTGQASRPR-QRERPGQ 270
Query: 371 RPHPQGAGSPFILAW*LRQRHQVLPDPGAQLRLQGQVQAGVPRRR*KKTQFWRYFLVI 544
P A +P A Q P P + + + + PR R + W ++I
Sbjct: 271 AARPGQAATPRQAA---DQDQAARPRPSCKTKPSPKTKTMPPRSRLEPQSSWNRAVII 325
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 54 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 176
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,278,594
Number of Sequences: 59808
Number of extensions: 454146
Number of successful extensions: 1658
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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