Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20171
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 25  ELKIRDFFINIQLIALYKYTLIFFVTYY 108
           E +  D+   +QL+ ++ Y +  F  YY
Sbjct: 131 ESERNDYVSLLQLVFVFCYFIYLFTVYY 158



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 90  IFCYILQTSYVYYV 131
           +FCY +    VYY+
Sbjct: 146 VFCYFIYLFTVYYI 159


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 253 KSSFKNTSWVSIDKRAVAFSIWTGR 327
           +  F  T W +  +R + F I TGR
Sbjct: 210 RRDFLRTYWSAKRQRDIRFQIATGR 234


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 63  QLYIYKEITDFQFIFWIFS 7
           Q  +YKE+TD + +  I S
Sbjct: 123 QAPVYKELTDIKLVLNILS 141


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 63  QLYIYKEITDFQFIFWIFS 7
           Q  +YKE+TD + +  I S
Sbjct: 49  QAPVYKELTDIKLVLNILS 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,555
Number of Sequences: 336
Number of extensions: 3391
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)