Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20171
(585 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC075805-1|AAH75805.1| 960|Homo sapiens optic atrophy 1 (autoso... 52 1e-06
AB011139-1|BAA25493.1| 978|Homo sapiens KIAA0567 protein protein. 52 1e-06
BC026693-1|AAH26693.1| 343|Homo sapiens TMBIM1 protein protein. 29 9.1
BC026348-1|AAH26348.1| 311|Homo sapiens transmembrane BAX inhib... 29 9.1
BC013428-1|AAH13428.1| 311|Homo sapiens transmembrane BAX inhib... 29 9.1
BC007980-1|AAH07980.1| 311|Homo sapiens transmembrane BAX inhib... 29 9.1
AK095270-1|BAC04516.1| 303|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK075465-1|BAC11636.1| 137|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK027755-1|BAB55346.1| 137|Homo sapiens protein ( Homo sapiens ... 29 9.1
AF193045-1|AAG22473.1| 311|Homo sapiens unknown protein. 29 9.1
AB257295-1|BAE93467.1| 311|Homo sapiens responsive to centrifug... 29 9.1
>BC075805-1|AAH75805.1| 960|Homo sapiens optic atrophy 1 (autosomal
dominant) protein.
Length = 960
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1
Query: 334 LLYKPIDTSHVQRRCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWKDGLPD 507
L + PI + RR + AR +LK+RYL+LG AVGGG T K + +WKD +PD
Sbjct: 73 LKFSPIKYGYQPRRNFWP--ARLATRLLKLRYLILGSAVGGGYTAKKTFDQWKDMIPD 128
>AB011139-1|BAA25493.1| 978|Homo sapiens KIAA0567 protein protein.
Length = 978
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/58 (44%), Positives = 35/58 (60%)
Frame = +1
Query: 334 LLYKPIDTSHVQRRCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWKDGLPD 507
L + PI + RR + AR +LK+RYL+LG AVGGG T K + +WKD +PD
Sbjct: 91 LKFSPIKYGYQPRRNFWP--ARLATRLLKLRYLILGSAVGGGYTAKKTFDQWKDMIPD 146
>BC026693-1|AAH26693.1| 343|Homo sapiens TMBIM1 protein protein.
Length = 343
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 252 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 286
>BC026348-1|AAH26348.1| 311|Homo sapiens transmembrane BAX
inhibitor motif containing 1 protein.
Length = 311
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 220 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 254
>BC013428-1|AAH13428.1| 311|Homo sapiens transmembrane BAX
inhibitor motif containing 1 protein.
Length = 311
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 220 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 254
>BC007980-1|AAH07980.1| 311|Homo sapiens transmembrane BAX
inhibitor motif containing 1 protein.
Length = 311
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 220 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 254
>AK095270-1|BAC04516.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ37951 fis, clone CTONG2009257, weakly similar to
Rattus norvegicus neural membrane protein 35 mRNA. ).
Length = 303
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 212 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 246
>AK075465-1|BAC11636.1| 137|Homo sapiens protein ( Homo sapiens
cDNA PSEC0158 fis, clone PLACE1008738, moderately
similar to PP1201 protein. ).
Length = 137
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 46 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 80
>AK027755-1|BAB55346.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ14849 fis, clone PLACE1000611, weakly similar to
Rattus norvegicus neural membrane protein 35 mRNA. ).
Length = 137
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 46 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 80
>AF193045-1|AAG22473.1| 311|Homo sapiens unknown protein.
Length = 311
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 220 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 254
>AB257295-1|BAE93467.1| 311|Homo sapiens responsive to centrifugal
force and shear stress gene 1 protein.
Length = 311
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 107 TNFLCVLRDYLF*TG*GYEIIYHFKNIFWLPMLFS 211
T CVL L TG I+ +F+ ++WL ML++
Sbjct: 220 TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYA 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,940,937
Number of Sequences: 237096
Number of extensions: 1845085
Number of successful extensions: 10783
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10782
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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