Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20171
         (585 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058366-1|AAL13595.1|  933|Drosophila melanogaster GH13793p pro...    78   1e-14
AE013599-1850|AAF58275.2|  972|Drosophila melanogaster CG8479-PA...    78   1e-14
AE013599-1849|AAM70993.1|  933|Drosophila melanogaster CG8479-PB...    78   1e-14
AY119582-1|AAM50236.1|  604|Drosophila melanogaster LD11139p pro...    28   8.1  
AE014297-3665|AAF56361.2|  604|Drosophila melanogaster CG11069-P...    28   8.1  

>AY058366-1|AAL13595.1|  933|Drosophila melanogaster GH13793p
           protein.
          Length = 933

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +1

Query: 373 RCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWKDGLPD 507
           R YGMLV R +RG LK+RY+VLGGA+GGG++L+KKY EWKDGLP+
Sbjct: 76  RGYGMLVVRILRGALKLRYIVLGGAIGGGVSLSKKYEEWKDGLPN 120



 Score = 28.7 bits (61), Expect = 6.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 513 WLNDLLPDNEQWDRFTTTLI 572
           WL D +P  E+W +F+  LI
Sbjct: 123 WLEDAMPQGERWSQFSRNLI 142


>AE013599-1850|AAF58275.2|  972|Drosophila melanogaster CG8479-PA,
           isoform A protein.
          Length = 972

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +1

Query: 373 RCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWKDGLPD 507
           R YGMLV R +RG LK+RY+VLGGA+GGG++L+KKY EWKDGLP+
Sbjct: 76  RGYGMLVVRILRGALKLRYIVLGGAIGGGVSLSKKYEEWKDGLPN 120



 Score = 28.7 bits (61), Expect = 6.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 513 WLNDLLPDNEQWDRFTTTLI 572
           WL D +P  E+W +F+  LI
Sbjct: 123 WLEDAMPQGERWSQFSRNLI 142


>AE013599-1849|AAM70993.1|  933|Drosophila melanogaster CG8479-PB,
           isoform B protein.
          Length = 933

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +1

Query: 373 RCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWKDGLPD 507
           R YGMLV R +RG LK+RY+VLGGA+GGG++L+KKY EWKDGLP+
Sbjct: 76  RGYGMLVVRILRGALKLRYIVLGGAIGGGVSLSKKYEEWKDGLPN 120



 Score = 28.7 bits (61), Expect = 6.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 513 WLNDLLPDNEQWDRFTTTLI 572
           WL D +P  E+W +F+  LI
Sbjct: 123 WLEDAMPQGERWSQFSRNLI 142


>AY119582-1|AAM50236.1|  604|Drosophila melanogaster LD11139p
           protein.
          Length = 604

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 571 ISVVVNLSHCSLSGS-RSFN--QPYLEDHPSTRHISYSTSCLH 452
           ++ V+ +S    SG+ RSF   QP+L+D+    H  Y++S LH
Sbjct: 489 VTYVLVISIALASGTVRSFKGLQPWLQDNTKGTHTRYASSLLH 531


>AE014297-3665|AAF56361.2|  604|Drosophila melanogaster CG11069-PA
           protein.
          Length = 604

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 571 ISVVVNLSHCSLSGS-RSFN--QPYLEDHPSTRHISYSTSCLH 452
           ++ V+ +S    SG+ RSF   QP+L+D+    H  Y++S LH
Sbjct: 489 VTYVLVISIALASGTVRSFKGLQPWLQDNTKGTHTRYASSLLH 531


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,794,191
Number of Sequences: 53049
Number of extensions: 568275
Number of successful extensions: 1417
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)