Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20168
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    27   0.55 
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    23   6.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.0  

>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 550 YYSCVIN*SMIVDFKNSLSF 609
           YYSC++N S+  DF+N+  F
Sbjct: 260 YYSCLLNSSVKEDFRNAFYF 279


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 385 YKYHI*IIVF*CVDILMYSWRIERWLQCFLNVNA 486
           Y + +  I+F  VD+        +W+ CF NV +
Sbjct: 43  YPFDLDSIIFRMVDVGGQRSERRKWIHCFENVTS 76


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 152  CSWLKISLFV*IIIIYFKYHT 90
            CS+L I+LFV +I+  F Y T
Sbjct: 1412 CSFLIINLFVAVIMDNFDYLT 1432


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,539
Number of Sequences: 2352
Number of extensions: 11150
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)