Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20167
(777 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 32 0.004
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 27 0.13
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 27 0.13
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 3.6
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 23 3.6
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 3.6
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 8.3
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 8.3
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 32.3 bits (70), Expect = 0.004
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 143 VEEDQAFGP-GTCRYGGKVY-VSAQQIPRDDPCDFCFC 250
+ +D GP G C Y K Y AQ D+PC CFC
Sbjct: 661 IVDDSDVGPSGDCFYENKFYRQEAQWTSSDNPCTTCFC 698
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 27.5 bits (58), Expect = 0.13
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 191 CRRSDKCQVRMLGLLQHSLALRHNRSRHLEGNYFLLDLRF 72
C D C G Q + LRHN +RHL N L L F
Sbjct: 378 CHMVDSCSNIQTGE-QFARLLRHNFNRHLNSNRAPLGLHF 416
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 27.5 bits (58), Expect = 0.13
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 191 CRRSDKCQVRMLGLLQHSLALRHNRSRHLEGNYFLLDLRF 72
C D C G Q + LRHN +RHL N L L F
Sbjct: 385 CHMVDSCSNIQTGE-QFARLLRHNFNRHLNSNRAPLGLHF 423
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 6 PQYPQHPYAAPAPGHGLQ 23
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 418 PHFPTHPYKGAAQRRGCQ 471
P +P HPY A G Q
Sbjct: 50 PQYPQHPYAAPAPGHGLQ 67
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 546 GDGQMKCDPKACTPEPMLRQMI 611
G G ++ DP +C P LRQ I
Sbjct: 39 GGGAVQPDPGSCDPSVGLRQGI 60
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 22.6 bits (46), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = -2
Query: 206 LIHILCRRSDKCQVRMLGLLQHSLALR-HNRSRHLEGN--YFLLDL 78
L +LC+R CQ+ L H L H R L N Y L+ L
Sbjct: 82 LAPVLCKRQQYCQLMSKLLGNHQLVYNCHTFGRFLAPNLTYLLVAL 127
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 360 DGDYTQCNHHDYNNNNHITSSFPYPPI 440
D D Q H+Y +NN + S PI
Sbjct: 28 DCDKNQNTEHNYTHNNEMYHSVKEEPI 54
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 161 FGPGTCRYGGKVYVSAQQIPRDDPCDFCFCFLVILFAYNKAVL 289
+GP G V+V + PC F ++I F + A+L
Sbjct: 211 YGPEEYVDGSIVFVCFSLVEDTLPCVFFLGSILIFFIFPLAIL 253
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 277 QSCPPPIHGCHEEP 318
Q PPP HEEP
Sbjct: 18 QEVPPPFGYYHEEP 31
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,986
Number of Sequences: 336
Number of extensions: 4561
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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