Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20166
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     71   3e-14
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.8  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   5.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.6  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 70.9 bits (166), Expect = 3e-14
 Identities = 36/91 (39%), Positives = 56/91 (61%)
 Frame = -1

Query: 511 ARNWKINKSEDVLSDELSVYLRTPVGRLKENPLEIWRDYKIQFPKLYKIAFKYLTIVGTS 332
           A+N+K  +   +  +EL  YL      L+ +PL  W+++++ +P LY +A   L I GTS
Sbjct: 510 AQNYKTPRQ--IAENELHQYLSVENIDLENDPLLWWKEHQVLYPSLYTLAMSTLCIPGTS 567

Query: 331 VPSERLFSQAGLVMTEQRNRLKGKRLANFCF 239
           VP ERLFS+AG + +E+R+RL  K+L    F
Sbjct: 568 VPCERLFSKAGQIYSEKRSRLAPKKLQEILF 598


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 558  KNEEAFSLWTDHHKLVHVTGK 496
            +N++ +S+W DH + V +  K
Sbjct: 2578 RNDQFYSVWLDHERSVRLVIK 2598


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 558  KNEEAFSLWTDHHKLVHVTGK 496
            +N++ +S+W DH + V +  K
Sbjct: 2579 RNDQFYSVWLDHERSVRLVIK 2599


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -1

Query: 445 TPVGRLKENPLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLFSQAGLV 293
           T V  L++N     +D KI    + K+  + + ++G       L +Q G+V
Sbjct: 150 TVVANLEKNGEPALKDSKIAPQIVLKVGNRKVGVIGALYDKTHLVAQTGMV 200


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 585 PESDSDKSDKNEEAFSLWTDHHKL 514
           PE+ S ++++   A +LW ++H L
Sbjct: 691 PEAASQRAEEAVSAVNLWMENHCL 714


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,527
Number of Sequences: 2352
Number of extensions: 11317
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)