Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20166
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M69216-2|AAA51465.1|  661|Drosophila melanogaster HFL1 protein.        57   2e-08
AY071269-1|AAL48891.1|  555|Drosophila melanogaster RE30177p pro...    49   4e-06
AE014134-2397|AAF53330.3|  555|Drosophila melanogaster CG16863-P...    49   4e-06
AE014134-2396|ABI31315.1|  661|Drosophila melanogaster CG16863-P...    49   4e-06
AE014134-1199|AAF52464.1|  611|Drosophila melanogaster CG13775-P...    29   3.7  
X04705-1|CAA28410.1|  644|Drosophila melanogaster protein ( Dros...    29   4.9  

>M69216-2|AAA51465.1|  661|Drosophila melanogaster HFL1 protein.
          Length = 661

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
 Frame = -1

Query: 469 DELSVYLRTPVGRLKEN--PLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLFSQAGL 296
           DE+  Y+R  V  L +N   +E W++    +P+L K+A K L+I  +S  +ER+FS AG 
Sbjct: 572 DEIERYIRQRVP-LSQNFEVIEWWKNNANLYPQLSKLALKLLSIPASSAAAERVFSLAGN 630

Query: 295 VMTEQRNRLKGKRLANFCFYIALTKNI 215
           ++TE+RNRL  K + +  F  +  KN+
Sbjct: 631 IITEKRNRLCPKSVDSLLFLHSYYKNL 657


>AY071269-1|AAL48891.1|  555|Drosophila melanogaster RE30177p
           protein.
          Length = 555

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -1

Query: 469 DELSVYLRTPVGRLKENPLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLFSQAGLVM 290
           DE++ Y    +  L+ +P ++W +     P L+ +A +YL +  T+ P++RLF+  G  +
Sbjct: 468 DEIARYFCAGMSTLRADPFQLWEELAEAHPFLHNVAQRYLHVPATAEPADRLFTAEGAAV 527

Query: 289 TEQRNRLKGKRLANFCF 239
             Q  RL    + N  F
Sbjct: 528 AAQYARLIENNMENILF 544


>AE014134-2397|AAF53330.3|  555|Drosophila melanogaster CG16863-PA,
           isoform A protein.
          Length = 555

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -1

Query: 469 DELSVYLRTPVGRLKENPLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLFSQAGLVM 290
           DE++ Y    +  L+ +P ++W +     P L+ +A +YL +  T+ P++RLF+  G  +
Sbjct: 468 DEIARYFCAGMSTLRADPFQLWEELAEAHPFLHNVAQRYLHVPATAEPADRLFTAEGAAV 527

Query: 289 TEQRNRLKGKRLANFCF 239
             Q  RL    + N  F
Sbjct: 528 AAQYARLIENNMENILF 544


>AE014134-2396|ABI31315.1|  661|Drosophila melanogaster CG16863-PB,
           isoform B protein.
          Length = 661

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/77 (28%), Positives = 40/77 (51%)
 Frame = -1

Query: 469 DELSVYLRTPVGRLKENPLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLFSQAGLVM 290
           DE++ Y    +  L+ +P ++W +     P L+ +A +YL +  T+ P++RLF+  G  +
Sbjct: 574 DEIARYFCAGMSTLRADPFQLWEELAEAHPFLHNVAQRYLHVPATAEPADRLFTAEGAAV 633

Query: 289 TEQRNRLKGKRLANFCF 239
             Q  RL    + N  F
Sbjct: 634 AAQYARLIENNMENILF 650


>AE014134-1199|AAF52464.1|  611|Drosophila melanogaster CG13775-PA
           protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -1

Query: 457 VYLRTPVGRLKEN--PLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLFSQA 302
           +YL     R+  N  PL  WR   I++  LY I  K+L+    SV SE LF ++
Sbjct: 525 LYLYNSEPRIDRNMDPLIWWRS-NIKYISLYGIVRKFLSAPAASVVSEGLFRKS 577


>X04705-1|CAA28410.1|  644|Drosophila melanogaster protein (
           Drosophila transposableelement hobo 108. ).
          Length = 644

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -1

Query: 469 DELSVYLRTPVGRLKEN--PLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLF 311
           DE+  Y+R  V  L +N   +E W++    +P+L K+A K L+I  +S   +  F
Sbjct: 590 DEIERYIRQRVP-LSQNFEVIEWWKNNANLYPQLSKLALKLLSIPASSAELKECF 643


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,587,491
Number of Sequences: 53049
Number of extensions: 517991
Number of successful extensions: 1187
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)