Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20165
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 308 4e-84
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 308 4e-84
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 305 2e-83
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 243 9e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 194 7e-50
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 194 7e-50
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 176 1e-44
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 87 2e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 87 2e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 83 2e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 83 2e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 83 2e-16
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 52 6e-07
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 41 0.001
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 38 0.008
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 36 0.030
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 35 0.070
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.12
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.28
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.28
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.87
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.0
AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical... 30 2.0
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.6
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.6
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.6
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.5
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 28 6.1
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 28 8.1
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 308 bits (755), Expect = 4e-84
Identities = 145/154 (94%), Positives = 148/154 (96%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 409
DKLKAERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 410 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
GEFEAGISKNGQTREHALLA TLGVKQLIV NK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Score = 91.1 bits (216), Expect = 8e-19
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 508 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKCLGSRD 687
+MDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ +
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG 213
Query: 688 -AVERKEG 708
AVERKEG
Sbjct: 214 WAVERKEG 221
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 308 bits (755), Expect = 4e-84
Identities = 145/154 (94%), Positives = 148/154 (96%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 409
DKLKAERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 410 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
GEFEAGISKNGQTREHALLA TLGVKQLIV NK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNK 154
Score = 91.1 bits (216), Expect = 8e-19
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 508 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKCLGSRD 687
+MDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ +
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG 213
Query: 688 -AVERKEG 708
AVERKEG
Sbjct: 214 WAVERKEG 221
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 305 bits (750), Expect = 2e-83
Identities = 158/201 (78%), Positives = 163/201 (81%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 409
DKLKAERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 410 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRR 589
GEFEAGISKNGQTREHALLA TLGVKQL + L T SPD +SRR
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRR 163
Query: 590 LATTQLLSLSCPFLDGTETTC 652
T Q L D TETTC
Sbjct: 164 SDTIQRLFHLSQSPDSTETTC 184
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 243 bits (595), Expect = 9e-65
Identities = 112/117 (95%), Positives = 115/117 (98%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 400
DKLKAERE GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 91.1 bits (216), Expect = 8e-19
Identities = 45/68 (66%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 508 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLELQPKCLGSRD 687
+MDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE+ +
Sbjct: 120 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG 179
Query: 688 -AVERKEG 708
AVERKEG
Sbjct: 180 WAVERKEG 187
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 194 bits (472), Expect = 7e-50
Identities = 90/151 (59%), Positives = 112/151 (74%)
Frame = +2
Query: 59 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 238
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 239 KAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 418
+ ERE G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 419 EAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
E G GQT+EHALL +LGV QLIV VNK
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNK 317
Score = 34.3 bits (75), Expect = 0.093
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 532 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 657
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 194 bits (472), Expect = 7e-50
Identities = 90/151 (59%), Positives = 112/151 (74%)
Frame = +2
Query: 59 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 238
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 239 KAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 418
+ ERE G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 419 EAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
E G GQT+EHALL +LGV QLIV VNK
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNK 335
Score = 34.3 bits (75), Expect = 0.093
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 532 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 657
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 176 bits (429), Expect = 1e-44
Identities = 79/153 (51%), Positives = 109/153 (71%)
Frame = +2
Query: 53 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 232
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 233 KLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
ERE G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 413 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
EFE G + GQTREH++L T GVK L++ VNK
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNK 256
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 508 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 642
+MD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 256 KMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 229
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 230 DKLKAER 250
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 86.6 bits (205), Expect = 2e-17
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Frame = +2
Query: 62 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 236 LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 415
K E++ GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 416 FEAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
E QT+EH +LA +GVK + + +NK
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINK 170
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 86.6 bits (205), Expect = 2e-17
Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Frame = +2
Query: 62 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 236 LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 415
K E++ GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 416 FEAGISKNGQTREHALLAFTLGVKQLIVGVNK 511
E QT+EH +LA +GVK + + +NK
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINK 170
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 56 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 236 LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 415
E+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 416 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNK 511
QTREH LLA +GV ++V +NK
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNK 176
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 56 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 236 LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 415
E+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 416 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNK 511
QTREH LLA +GV ++V +NK
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNK 177
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 83.4 bits (197), Expect = 2e-16
Identities = 56/154 (36%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +2
Query: 56 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 235
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 236 LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 415
E+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 416 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNK 511
QTREH LLA +GV ++V +NK
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNK 177
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 54.0 bits (124), Expect = 1e-07
Identities = 45/146 (30%), Positives = 64/146 (43%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 254 LGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 433
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 434 KNGQTREHALLAFTLGVKQLIVGVNK 511
QT + LAF + Q+I +NK
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINK 163
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/113 (33%), Positives = 52/113 (46%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 254 LGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 51.6 bits (118), Expect = 6e-07
Identities = 37/113 (32%), Positives = 52/113 (46%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 254 LGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 202
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 203 GSFKYAWVLDK-----LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGT 367
+ + L+K +K E + T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFE-TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAAL 131
Query: 368 SQADCAVLIVAAGTG 412
D A+++V +G
Sbjct: 132 GVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 43.6 bits (98), Expect = 2e-04
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Frame = +2
Query: 50 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 202
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 203 GSFKYAWVLDK-----LKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGT 367
+ + L+K +K E + T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFE-TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAAL 131
Query: 368 SQADCAVLIVAAGTG 412
D A+++V +G
Sbjct: 132 RVTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 41.1 bits (92), Expect = 8e-04
Identities = 41/165 (24%), Positives = 73/165 (44%)
Frame = +2
Query: 71 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 250
+N+ ++GHVDSGK+T T + + + F+ A + +
Sbjct: 14 LNLGILGHVDSGKTTLTRRIA------ELGSTSAFDAHATSTTTDGIR--------RNTL 59
Query: 251 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 430
+LG + +L S + +ID PGH I+ ++ ++ D A++I+ + AGI
Sbjct: 60 DLGFSTMTSL-----SGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGI 109
Query: 431 SKNGQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRR 565
QT EH LLA ++I+ +NK +S +K R+
Sbjct: 110 QP--QTAEHLLLASKFCPNRVIIVLNKCDLAEKSKISESAKKVRK 152
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 433
GIT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 434 KNGQTREHALLAFTLGVKQLIVGVNK 511
QT + A V QL+V VNK
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNK 265
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 37.9 bits (84), Expect = 0.008
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Frame = +2
Query: 2 GTSGYYTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEK 172
G S + ++IRD P K+ + V+G+VD+GKST G L + G RT
Sbjct: 119 GGSLFTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLF 177
Query: 173 FEKEAQEMGKGSFKYAWVL------DKLKAERELGITIDIALWKFETSKYYVTIIDAPGH 334
K E G+ S +L + + +D + +K VT ID GH
Sbjct: 178 RHKHEFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGH 236
Query: 335 RDFIKNMITGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 499
++K I G + D +L++ A G G T+EH LA +L V +V
Sbjct: 237 EKYLKTTIFGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV 286
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 35.9 bits (79), Expect = 0.030
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +2
Query: 56 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 232
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 233 KLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 397
+ E+ GIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 35.9 bits (79), Expect = 0.030
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +2
Query: 56 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 232
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 233 KLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 397
+ E+ GIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 34.7 bits (76), Expect = 0.070
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 516 IHLFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 382
++LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 11 LNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.12
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Frame = +2
Query: 2 GTSGYYTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEK 172
G S + ++IRD P K+ + V+G+VD+GKST G L + G RT
Sbjct: 119 GGSLFTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLF 177
Query: 173 FEKEAQEMGKGSFKYAWVL------DKLKAERELGITIDIALWKFETSKYYVTIIDAPGH 334
K E G+ S +L + + +D + +K VT ID GH
Sbjct: 178 RHKHEFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGH 236
Query: 335 RDFIKNMITGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 499
++K I G + + +L++ A G G T+EH LA +L V +V
Sbjct: 237 EIYLKTTIFGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV 287
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 254 LGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 254 LGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 412
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 305 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 484
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 485 KQLIVGVNK 511
L++ NK
Sbjct: 182 NHLMILQNK 190
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 314 IIDAPGHRDFIKNMITGTSQADCAVLIV 397
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical
protein ZK488.1 protein.
Length = 358
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/123 (26%), Positives = 54/123 (43%)
Frame = +2
Query: 278 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 457
++KFE+S + +T + K ITGT VL+V+ +F K+ Q
Sbjct: 104 VYKFESSLHRLTFGLTKSRTEDYKTKITGTLGKLQIVLVVSEAFWKFLNKRYKSAQIFFA 163
Query: 458 ALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 637
F L + + I + W L+ H+ + RKS YP+ A TQ++S +D
Sbjct: 164 FFPNFQLKILECIWHI--WATLDRHSATAVYRKS---YPNA----APTQIVSRRGVLMDL 214
Query: 638 TET 646
+T
Sbjct: 215 AKT 217
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.5 bits (63), Expect = 2.6
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Frame = +2
Query: 23 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC----GGIDKRTIEKFEKEAQ 190
+ ++R P+ ++ + + V+G D GKST G L C G + I +F E +
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIFRFPHEVR 212
Query: 191 EMGKGSFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 370
GK S V+ + + + E S VT+ID G + K I G +
Sbjct: 213 -TGKTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLT 271
Query: 371 --QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 499
A L+VAA + GI+ TREH L L + ++
Sbjct: 272 GYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL 309
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 152 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 152 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 572 PHTSRRLATTQLLSLSCPFLD 634
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 572 PHTSRRLATTQLLSLSCPFLD 634
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 572 PHTSRRLATTQLLSLSCPFLD 634
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 572 PHTSRRLATTQLLSLSCPFLD 634
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/136 (19%), Positives = 57/136 (41%)
Frame = +2
Query: 71 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 250
+N+ ++GHVDSGK+T T + + + F+ A + +
Sbjct: 14 LNLGILGHVDSGKTTLTRRI------AELGSTSAFDAHATSTTTDGIR--------RNTL 59
Query: 251 ELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 430
+LG + +L S + +ID PGH I+ ++ ++ D A+ +++ + G+
Sbjct: 60 DLGFSTMTSL-----SGRRLALIDCPGHSGLIRAVLAASTVFDMAI-VISESAKKVRKGL 113
Query: 431 SKNGQTREHALLAFTL 478
G ++ +L
Sbjct: 114 KSMGVDENSPIVEMSL 129
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 74 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 253
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
Query: 254 LGI 262
L +
Sbjct: 1692 LAM 1694
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.1
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 493 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 335
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 334 VSRSINDGNIVLASFELPESNIDCDTELTLSL*FVQYPSI 215
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 221 WVLDKLKAERELGITIDIALWKFETSKYYVTII 319
W+++KL R L +T W ++ YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 308 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 403
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 221 WVLDKLKAERELGITIDIALWKFETSKYYVTII 319
W+++KL R L +T W ++ YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 221 WVLDKLKAERELGITIDIALWKFETSKYYVTII 319
W+++KL R L +T W ++ YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 493 HRRSKQMDSTEPPYSEPRF-------EEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 651
H R QMD EPP ++ EE+K V +Y++ + + S HG+
Sbjct: 317 HFRESQMDKKEPPEFVQQYDLMKVMIEEVKNLVPTYVRVVTSLKNGESV--YSHKHGE-- 372
Query: 652 LELQPKCLGSRDAVERKEGKLTE 720
EL+ KCL + +++ K+ E
Sbjct: 373 -ELRSKCLEIQKSIDYVSKKIAE 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,415,549
Number of Sequences: 27780
Number of extensions: 375288
Number of successful extensions: 1174
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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